Petromyzon marinus (sea lamprey): 116952578
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Entry
116952578 CDS
T09614
Symbol
POLD3
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03030
DNA replication
pmrn03410
Base excision repair
pmrn03420
Nucleotide excision repair
pmrn03430
Mismatch repair
pmrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116952578 (POLD3)
03410 Base excision repair
116952578 (POLD3)
03420 Nucleotide excision repair
116952578 (POLD3)
03430 Mismatch repair
116952578 (POLD3)
03440 Homologous recombination
116952578 (POLD3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116952578 (POLD3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmrn03032
]
116952578 (POLD3)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116952578 (POLD3)
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116952578 (POLD3)
DNA replication proteins [BR:
pmrn03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
116952578 (POLD3)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
116952578 (POLD3)
MMR (mismatch excision repair)
DNA polymerase delta complex
116952578 (POLD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
MSP1_C
DUF3246
Motif
Other DBs
NCBI-GeneID:
116952578
NCBI-ProteinID:
XP_032827945
UniProt:
A0AAJ7XB71
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All DBs
Position
47:1060900..1084270
Genome browser
AA seq
492 aa
AA seq
DB search
MPPATGVDEMYIDNIDEFIDDESRIVTYKWLSYTLQVHVNTAKKMLWEFVRRAREEKPKV
ALHVTYLVSGVSTLDGLPCHKVSVVREEELESAKAQLSLLASVHVYSVQRARLLDSGMLY
MADYDIIRDNLHQSSRFSSIQYSRGVARSTEEMQALRSQATSAQEPSDPLDGPLAAPAAP
PAATNGQCAPKATPRAAPPKGIMGMFAGKGGGSKEGKVKKESPAPEPVKEKPAAASVKAP
VKVSIFASAAKAKPKEEIKTEVKASVSTEEEKQAKVDDTRGNSSGRVKRPKVSDSEDEEE
EKVVAAVESKHAGKKGAGNAGKRAAARDGKKRGASPEAKKRKRIRQPVSDSSSSDDDDDD
DDNDEEQEAPSPPTIGTPPLPEVTEHQQDNIGSEKTEQEANKSGARRKRRRVLKSKTFLD
EEGSMVTEKDWVSESCTDSEGEFQPATKKAPTVPLPQKAAQKMEGGKGKDKKPSQQSKLG
KQTSIMGFFQKK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgccgccagctacgggggtcgatgaaatgtacatcgacaacatcgacgagttcattgac
gacgagagcagaatcgtcacgtacaaatggctgagctacactctgcaggtgcatgtgaac
acagcaaaaaaaatgctgtgggagtttgtgcggcgcgcgagagaggagaagcccaaggtt
gccctgcacgtcacgtaccttgtgtcgggcgtctccacgctggacgggctgccttgtcac
aaagtatctgtggtgagagaagaagagctggaaagcgccaaggcccagctctccctgctc
gcgagcgtgcacgtgtacagcgtgcagcgagcccgcctgctcgacagcggcatgctctac
atggccgactatgacatcatccgcgacaacctgcaccagtccagcaggtttagcagcatt
caatactcgcggggtgtcgcacggagcacggaggagatgcaggccctgcgatctcaggcg
acctccgcccaggagccgtctgaccctctcgacggccccctagctgccccggccgcaccc
cctgctgccaccaacggtcaatgcgcccctaaagccaccccacgtgctgctccacccaag
ggcatcatgggaatgtttgctgggaaggggggtggcagcaaggaaggcaaagtcaagaag
gaatctcctgccccagagccagtcaaggagaagcctgcagcagcctctgttaaagctccg
gtgaaggtcagcatatttgcgtcggcagcgaaagctaaacccaaggaagaaatcaagact
gaggttaaggcatctgtttcaacggaggaggaaaaacaggcgaaagttgatgacacacgt
ggaaacagcagtgggagagtcaaacggccaaaggtgtcggacagcgaagatgaggaagaa
gaaaaggtggtggcggccgtggagtcgaagcatgctggcaagaagggagcggggaatgct
gggaagagggcggctgcacgtgacggcaagaagaggggtgcgtcgccagaggccaaaaag
cgcaagagaatccgacagcctgtgtcagacagcagcagcagcgatgacgacgacgacgac
gacgataatgatgaagagcaggaagccccttccccgccaaccattggaactccgcctttg
cctgaagtgactgagcatcaacaagacaacatcggttcagaaaaaacagagcaggaggcc
aacaagtctggtgcgcgaaggaaacggcgtcgtgttctcaaatccaagaccttcttggat
gaggagggatcgatggtgactgagaaagattgggtgagtgagtcatgtacagacagtgag
ggtgaattccaaccagctaccaagaaagcaccaacagtaccgcttcctcagaaggccgct
cagaagatggaaggcgggaaggggaaagacaaaaagccttctcaacagagcaaactcgga
aagcaaacatccatcatgggcttcttccagaagaagtaa
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