Petromyzon marinus (sea lamprey): 116952580
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Entry
116952580 CDS
T09614
Symbol
TSKU
Name
(RefSeq) tsukushin
KO
K08130
tsukushi
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmrn00535
]
116952580 (TSKU)
Proteoglycans [BR:
pmrn00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
116952580 (TSKU)
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Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_14
Motif
Other DBs
NCBI-GeneID:
116952580
NCBI-ProteinID:
XP_032827949
UniProt:
A0AAJ7U1F9
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Position
47:complement(1054951..1062756)
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AA seq
373 aa
AA seq
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MPPAGRRPACPLLPLLLLLCLTWPALAPMGANTGPSCPNGCACHLDSYGRFSSYSLTRVD
CSSSGLRDFPATLPLTTTHLSLVDNHLGPTVNPGGPGYTTLLALNLSHNGVKRLHKGTFS
RLRYLDALDLSYNAVGQVDAGAFERAPLSTIDLSHNALSDEFDLSAFEADLPVIGVQRLS
LDLSHNRISALKRKGGGGGGGAPAGTLHIRSLNLAANALMEAPPPELLRHLPDLQYLSLD
SNPITRLRQSAFFHLRDLTHLSLRNLAPDVHFSRGTFRGLEGTLQVLDLSENCQSGVTLL
GVELGELRSLFELQLSVSDDPSLALLPAALGLPLAGAWKCWEPRYPKGRAATHKVTGGCM
NVACYRFPAHETL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctgcaggccggcgcccagcctgccccctcctgccgctgctgctcctcctgtgc
ctcacctggccggcgttggcgcccatgggcgccaacacgggcccgtcgtgtcccaacggc
tgcgcgtgtcacctcgacagctacggccgcttctccagctacagcctgacgcgtgtcgac
tgctcgtcgtcaggactgcgggacttccccgccactctgcctctgaccacgacgcacctc
tcgctggtggacaaccacctgggcccgacggtgaacccaggcggacccggttacacgacc
ctgctggctctcaacctcagtcacaacggcgtgaagcgcctgcacaagggcaccttctcc
aggctgcgctacctggacgcgctggatctgagctacaacgccgtggggcaggtggacgcg
ggcgccttcgagagggctccgttgtccacaatcgacctgagccacaacgccctgtcggac
gagttcgacctgagcgcgtttgaagcggacctgccggtgattggggttcagaggctgtcc
cttgacctgtcccacaatcggatcagcgccctgaagcgaaagggaggagggggtggtggt
ggtgctcctgctggaacgctgcacatacgaagtctcaacctggctgcaaatgctctcatg
gaggcgccaccaccggaacttctgagacacctaccagacctacaatacctcagcctggac
tcaaaccccataactcgactccgacagtcagccttttttcacctcagggacctcacacac
ctatccctccgtaacctcgctccggatgtacacttttccagaggaaccttccggggtctc
gaggggacactgcaagtcttggacctttctgaaaactgccagtcaggagttacccttttg
ggagtcgagctgggcgagctgagatcgctgtttgaacttcagctgtcggtgtctgacgac
ccatctctggccctgctgccggcggccctgggcctccccctagcaggcgcgtggaagtgc
tgggagccacggtaccccaaaggtcgtgccgccacgcacaaagtgaccgggggctgcatg
aacgtggcgtgttacagattccccgcgcacgagacgctctag
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