Petromyzon marinus (sea lamprey): 116952697
Help
Entry
116952697 CDS
T09614
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116952697
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116952697
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116952697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
UreE_N
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
116952697
NCBI-ProteinID:
XP_032828177
UniProt:
A0AAJ7U1V9
LinkDB
All DBs
Position
48:1463872..1486036
Genome browser
AA seq
747 aa
AA seq
DB search
MGCTLCALRSKDEQYKLLYEVCQVGGKDSGKAVHGDEEAAVAEAALLRAARDPVVVEVLR
RGRPSLAPPRPPGGRARTDASTQTELPPSPSGPRSPATPPLPNVHPLLLAQGLCELPPEY
FDSSDYLPSMQQDAHHAEGLEYEEVDLHRGSSRERLGLTVCYRTEDEDDAGIYVSQVNPN
SIAARDGRIREGDRILQINGLDVHDRRQAVARLTQEEGTDVSLLLARPDTQLEDGWVEEE
HRAMMETLRVEILQDERLEPIAYIGSSLIQARAPPDDDAGLTDSVSHGHGKDSGLGRTDE
SSEHDGGVGVGAGGAPPSCAGPRGGSGVGSDLRRHLRTKAGTACGVADVRREIALLHDEL
RRFELRVQSHGHGAAAAAVAAAAAVSPRDVGTEPGLANIAELPEGHDPDPASAAFATAPS
PQADGEAGGSSPPGGRDPRQGPRGSNDAGATTRARPAASAGRCRPERAAAATAAATAASA
DAGADGAPVPLHARHYRSYMQLVQQKSAVEYAQSQLSLASLCRFERREAGAARPLPQSAS
APASPYEWKVKACGGGGAAGRGGPGGAEGSRCLTARRPVRDRLLRQRALRIREERSGVTT
DDDVLSEMKTGRYWSKEQRKQQLVRAREQRRRREFMQRCRLDWLGEKVAPAADAAAAAAA
AAAAMASATAAAAGVGDAVPAAVPPSDFAGHARELSILELSHRKMMKKRNKKILDNWMTI
QEMLAHGQKSPDGNGKVYNPLLSVTTV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcacgctgtgcgcactgcgctccaaggacgagcagtacaagctgctgtatgaa
gtttgccaggtgggcggcaaggactccggcaaggcagtgcacggggacgaggaggcggcg
gtggcggaggcggcgctgctgcgggcggcgcgcgaccccgtcgtggtggaggtgctgcgc
aggggccgcccctcgctggccccaccgaggccaccgggcggacgcgcccgcacggacgcc
agcacgcagaccgagttgccaccctcgccaagcgggccgcgcagcccggccacgccgccc
ctgcccaacgtgcatcctctgctgctggcccagggcctctgtgagctgccacccgaatac
tttgactcaagtgactaccttcccagcatgcaacaggacgcccaccatgcggagggtctg
gagtacgaggaggtggatttgcaccgtggctcaagccgggagcggctaggcctcaccgtg
tgctaccgcacggaggacgaggacgacgccggcatctacgtaagccaggtgaatcccaac
agcatcgcagcacgagacggacgcatcagagagggcgacagaatcctccagatcaatggg
ctggacgtgcacgaccggcggcaggcggtggcgcgcctcacccaggaggagggcaccgac
gtgtcgctgctgctggcacggcccgacacgcagctcgaagacggctgggtggaggaggag
caccgagcaatgatggagaccctgagggtggagatactgcaggacgagcggctggagccc
atcgcttacatcggctccagtctcatccaggcgagggcgcccccggacgacgacgcgggc
ctcacggactcggtgtcgcacggccacggcaaggacagcggcctgggccgcacggacgag
agctcggagcacgacggcggcgttggcgtcggcgctgggggcgcccccccgtcgtgcgca
gggccccgcggtggcagcggcgtcggctcagatctgcggcgccacctgcggacgaaggcg
gggacggcgtgcggcgtggccgacgtgcggcgcgagatcgcgctgctgcacgacgagctg
cggcgcttcgagctgcgcgtccagagccacggccacggcgccgcggccgccgccgtggcc
gcggccgccgccgtatcgccgcgcgacgtcggcacggaaccaggactcgcgaacatcgcc
gagctgcccgagggccacgacccggatcctgcctccgccgcttttgcgacggcgccgtcg
ccacaggcggacggggaagccggcgggagctcgccgcccggcggccgcgaccctcgccag
ggccctcgcggctcgaacgacgccggagcgacgacccgagctcggcccgcggcaagtgcc
gggcgatgccgaccggagagggcggcggcggcgacggcggcggcgacggcggccagcgcg
gacgcgggcgcggacggcgcccccgtcccgctgcacgcgcgccactaccgcagctacatg
cagctggtgcagcagaagtcggcggtggaatacgcacagagccagctgagcctggccagc
ctgtgccggttcgagcgccgcgaggccggcgccgcgcggcccctgccgcagtccgcgtcg
gcgccggcctctccgtacgagtggaaggtgaaggcgtgcggcggtggcggcgcggcaggg
cgaggagggccgggcggcgcggagggctcgcgatgcctgacggcgcggaggcccgtgcgg
gaccggctcctgcggcagcgcgcgctcaggatccgcgaggagcgcagcggcgtcaccacg
gacgacgacgtgctcagcgagatgaagaccgggcgctactggagcaaggagcagcgcaag
cagcagctggtgcgggcgcgcgagcagcggcggcgacgcgagttcatgcagcgctgccgc
ctcgactggctcggggagaaggtggctcccgcagcggatgcagcggcagcggcggcggcg
gcggcagcagccatggcgtcggccacggcagccgctgcgggcgtcggtgacgcagtgccg
gcggccgtgcctccctcggacttcgctggccatgcgcgcgagctgagcatcctcgagctg
agtcaccgcaaaatgatgaagaagcgcaacaaaaagattttggacaactggatgaccatc
caggagatgctcgcccacgggcagaagtcgcccgacggaaacggcaaggtgtacaacccc
ctgctgtcggtcaccaccgtgtga
DBGET
integrated database retrieval system
