Petromyzon marinus (sea lamprey): 116952704
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Entry
116952704 CDS
T09614
Symbol
CCDC174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116952704 (CCDC174)
03041 Spliceosome [BR:
pmrn03041
]
116952704 (CCDC174)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116952704 (CCDC174)
Spliceosome [BR:
pmrn03041
]
Complex C
Other components
EJC/TREX
116952704 (CCDC174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
RelB_leu_zip
Motif
Other DBs
NCBI-GeneID:
116952704
NCBI-ProteinID:
XP_032828188
UniProt:
A0AAJ7XCH4
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Position
48:10120610..10129690
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AA seq
464 aa
AA seq
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MDKKTKKIVFKVNASSLVDLKAELYRKQESFKQEKIHQEQGLPSQRLPIKKPGLWNKQNV
GVAERSEKDQKEKTEEELTLDKAREKLEEKAKLYDQMEKGGLPGEEAEEMFLVDFTQKFL
NKQKDAVVQRGLREQEEVVVGPDEGATRARHPNGLEEEEELAKDEDIPAPSNPSEEWVDF
VDSLGRSRRCLRKDLRDLQEMDKKLAGSRGPVAGERTLLSEDMRKEMERERWEKEQEELR
AQPIGPIHYEHLREHEVRDLGVGYFAFSKDELKRKRQMDTLDMLRDQTLDQRSKREKLKE
KRQAVLEARLERVRQRKGKKPGTDGPEGETLDGEHVRAGSEPAEDVLQPGPSAGKVDVVV
QVRRDTKKGEMPRVRDWDKGKDFMLQDWQKGHGSQQRLPRDRPAEFAPPTTYFSGNKAGT
LPSSERLPRMATQGPRTSDSSQHTPAQPPTQLDEMLAFYKQSNK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaagacgaagaagatcgtgttcaaagtgaacgcgtcctcgctggtggacctg
aaggccgagctttaccgcaagcaggagtctttcaagcaggagaagatccatcaagagcaa
ggacttcccagtcaaaggcttcccatcaagaaaccaggactttggaacaaacagaatgtg
ggtgttgcggaacgttccgagaaggaccagaaggaaaagacggaggaggaattgactttg
gacaaggcgagggagaaattggaagaaaaagcaaagctgtacgaccagatggagaagggt
ggcctgcctggtgaggaggcagaggagatgttcctggtggacttcactcagaagtttctc
aacaaacaaaaagacgcagtggtgcagcgtggcctccgggagcaggaggaggtggtggtg
ggcccagacgaaggggcaaccagggccaggcatccaaacggactggaggaggaggaggag
ttggctaaagatgaggatattccagcaccatcaaacccgagtgaagaatgggttgacttt
gtggactcgctgggccgatcgagacgctgcttgaggaaggacctgcgtgacttgcaggaa
atggacaaaaagctggctggcagcagggggcccgtggccggtgaacggactctgctgtcg
gaggatatgcgaaaggagatggaacgcgagcgctgggagaaagagcaggaggagctccgg
gcacagccaattggtcctatccactacgaacacctccgagagcacgaggtgcgagatctg
ggcgtcggctactttgcgttttccaaggatgagctcaagcgcaagagacagatggatacc
ctggatatgctgcgtgatcagacactagaccaacgctccaagagagagaagctgaaggaa
aagcggcaggccgtgttggaggcccggctggagcgagtgcgacaacgcaagggcaagaag
cctggcacggatgggcctgaaggagagacgctggatggagaacatgtgcgtgctgggtca
gagcctgcagaggatgtcctccagccagggccgagtgcagggaaggtggacgtcgtggta
caagtgagaagagacaccaagaagggagaaatgccacgggtccgagattgggacaaaggc
aaagacttcatgttgcaggactggcagaaggggcacgggtcccagcagcgtttgccacgc
gatcgaccagctgagtttgcccctcccacgacttacttcagtggcaacaaagcggggacc
cttcccagcagcgagaggctgccccgtatggccacccagggtccacggacatccgactcc
tctcaacacacgcccgcacaaccacccacccagttggatgagatgcttgcattctacaag
cagtcgaataaataa
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