Petromyzon marinus (sea lamprey): 116952714
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Entry
116952714 CDS
T09614
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116952714 (APEX2)
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116952714 (APEX2)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116952714 (APEX2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
116952714
NCBI-ProteinID:
XP_032828208
UniProt:
A0AAJ7U1Q0
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Position
48:complement(2268521..2281507)
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AA seq
605 aa
AA seq
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MSVLTWNINGIRASRVGLKALLDSLDADVVCLQETKVTRDLLDEPTAVVDGYNAYFSFSR
VRSGYSGVATYCRDVATPLAAEEGLSGLLRGASGRRDDGSDGSVGCYGDTSEFTADELQA
LDAEGRAVVTQHRVRLAASGEERSLAIVNVYCPRADPDRPHRGDFKLRFYRLLQARCVAL
RNSGSHVIVLGDLNTAHRPIDHCDPEDPELFQEHPGRKWLDQFLCESSSSARPPPWPTDN
DHSHDGAGGGGGGGGDPPASRPGAAGPRFVDAFRLFHPTRADAFTCWCNVTGARVTNYGT
RIDYVLADGALAASRVLSACDIVPGVLGSDHCPVRAALALDFVPSPRRPPLCAHLMPEFA
GRQRKLSAFLVKGPVDRGGGGGGGEPEACSRDSALGPAGRRVDRAANVAGKASPSAAAAK
GKRAARESHGAKAKRAKGADEATAVPARGTLLSFLKRPTGSARLDPAIPAGGPAGGPVSC
RDKDSGASPEGAAMAAGGAEDAGGAGDTGGMELGGGGPAADPAADPATDDPQPRQRNLGT
DFWKSVLKGLPPAPPCRGHGEPCLLRTVKKPGQNFGRRFYVCPRPEGHASNKEARCNSFT
WVAKR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgacgtggaacatcaatggtatcagggcttcgcgcgtgggcctcaaggcc
ctgctcgactctctcgacgccgacgttgtctgcttacaggagactaaagtcacgagggac
ctcctggatgaacccacggccgtagtggatgggtacaatgcctacttcagcttctcgagg
gtccgcagcggctactctggcgtggccacgtactgcagggatgtggcgacccccctggcc
gccgaggaggggctgtcgggcctcctgcgaggggcgagcggtcgccgggacgacggcagc
gacggcagcgtcggctgctacggcgacaccagcgagttcaccgccgacgagctgcaggct
ctggacgccgagggcagggccgtggtgacgcagcaccgcgtgcggctggcggcgagcggg
gaagagcggagcctcgccatcgtcaacgtctactgtccccgcgccgaccccgataggccg
caccgcggggacttcaagctgcgcttctaccgcctcctgcaggcgcgctgcgtcgccctg
cgcaacagcggcagccacgtgattgtgctcggagacctgaacacggcacacagaccgata
gaccactgcgacccagaggatcccgagctgtttcaagaacaccctggcagaaagtggctg
gaccagttcctctgcgaatccagttcctctgcgagacctcctccttggcccaccgacaac
gaccacagccacgacggcgccggaggaggcggcggaggaggcggagaccctcccgcgtcg
cggcccggtgccgctggcccccgcttcgtcgacgccttccgcctcttccacccgacgcgc
gccgacgcgttcacctgctggtgcaacgtcaccggcgctcgcgtcaccaactacggcacg
cgcatcgactacgtcctcgccgacggtgccctggccgcctcccgcgtcctctcggcgtgc
gacatcgtgccgggcgtgctcggctcggaccactgccccgtgcgcgccgcgctggcgctc
gacttcgtgccgtcgccgcgccgcccgccgctgtgcgcgcacctcatgcccgagttcgcc
gggcgccagcgcaagctctcggcgttcctggtgaaggggccggttgaccgcggcggcggc
ggcggcggcggcgaacccgaggcctgctcgcgggattcggcgctcggcccggcggggcgg
cgcgttgaccgtgccgcgaacgttgccggcaaagcgagcccttcggccgccgcagcgaag
gggaagcgtgcggcacgcgagtcgcacggcgcgaaggccaagcgggcgaagggggccgac
gaggcgaccgccgtgccggccagggggaccctgctgagcttcctcaagcgcccgacgggc
agcgcgcggctcgacccggcgatcccggccggcggcccggccggcggcccggtctcctgt
cgcgacaaagattccggcgcgtcccccgagggagccgcgatggccgcggggggcgcggag
gacgcagggggcgcgggagatacggggggcatggagctgggcggtggcggccccgccgcc
gaccccgcggccgaccccgccaccgacgacccccagccgcggcagagaaatctcggcacg
gatttttggaagtcggtgctaaaggggctgcccccggcgccgccgtgcaggggccacggc
gagccgtgcctgctgaggacggtgaaaaaacccgggcagaatttcggccgccggttctac
gtgtgccctcggcccgagggccacgcgtcgaacaaggaggctcgctgcaactcgttcact
tgggtcgccaagaggtga
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