Petromyzon marinus (sea lamprey): 116952781
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Entry
116952781 CDS
T09614
Name
(RefSeq) fibromodulin-like
KO
K08121
fibromodulin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116952781
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmrn00535
]
116952781
Proteoglycans [BR:
pmrn00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
116952781
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Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRRNT
LRR_14
LRR_LRWD1
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
116952781
NCBI-ProteinID:
XP_032828298
UniProt:
A0AAJ7U1W5
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Position
48:252905..276345
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AA seq
357 aa
AA seq
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MARPGSPFWQLARVAPLLLLLVAVVGTASGLHYYRPRQEGGDPAPLQGGTPQGDCPAECE
CPARWPESLYCDGRGLKVMPPIPARIRFAFFQDNQLDVVPEGALRNATRLAWLVLQRNQI
TELDSGALARLGELQRLYLDFNNLTQVPPSLPPSLLDLRLGHNRITSVAGGALGALHNLT
SLLMHNNLLGEGGLGALGSLKSLRRLDLSGNALRSLPTPLPATLQQLYLDHNLVPSIPSG
FLKALPELQYLRLSHNALGGAEIPGEAFNSSASLLELGLSFNNLSRVPALPASLQHLYLQ
GNSIRELDAQALCGGGGVVGGPGAPRGLRRVRLDGNPLPRGLLPHLASACPGPELVF
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcccgggctccccgttctggcagctcgcccgagtggcgcctctcctgctgctg
ctggtggcggtggtggggacggcgtccggcctccactactaccgaccccggcaggagggg
ggggaccctgccccgctgcaggggggcacgccgcagggggactgccccgctgagtgcgag
tgcccggcgcgctggcccgagtccctctactgcgacggtcgcggcctcaaggtgatgccg
cccatcccggcgaggatccgcttcgcgttcttccaggataaccagctggacgtggtgccg
gagggtgcgctgaggaacgccacgcgtctggcgtggctcgtgctgcagaggaaccagatc
actgagctggacagcggagctctcgcacgcctcggggagctgcagagactttacctcgac
ttcaacaacctcacccaggtacccccctccctgccgccgtccctgctagacctgcgcctg
ggccacaaccgcatcacgtctgtggcaggcggcgcattgggagcgctgcacaacctcacc
tcactgctgatgcacaacaacctcctgggagagggggggctcggggccctagggtccctc
aagtctctccgtcgcttggatctgtcgggtaacgcgttgcggtcactgcccacgccgctg
cccgcgactctgcagcagctctacctggaccacaaccttgtgccctccatccccagcggc
ttcctcaaggccttgcccgagctgcagtacctgcgcctatctcacaacgccctggggggt
gccgagatcccgggggaggcattcaactcctcggcctccctcctcgagctgggcctgagc
tttaacaacctgtcccgcgtacctgccctgcccgcctccctgcagcacctctacctgcag
ggcaacagcatccgcgagctggacgcgcaggcgctgtgtgggggtggtggtgtagtgggg
ggccccggggccccccgcggtcttcgccgcgtccgcctggacgggaaccccctcccccgg
ggcctgctgccccacctcgcctcggcctgcccggggcccgagctcgtcttctga
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