KEGG   Petromyzon marinus (sea lamprey): 116952801
Entry
116952801         CDS       T09614                                 
Name
(RefSeq) ras-related protein Rab-40B-like
  KO
K07928  Ras-related protein Rab-40
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmrn04121]
    116952801
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:pmrn04031]
    116952801
Ubiquitin system [BR:pmrn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Target recognizing subunit
     116952801
GTP-binding proteins [BR:pmrn04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab40
    116952801
SSDB
Motif
Pfam: Ras Roc SOCS_box Arf MMR_HSR1 TFIIA Sas10
Other DBs
NCBI-GeneID: 116952801
NCBI-ProteinID: XP_032828360
UniProt: A0AAJ7U481
LinkDB
Position
3:complement(7093729..7105725)
AA seq 322 aa
MGTRSSPAKAFDYLLKVLLVGDSDVGKGEILASLAGPEEQAGEQKGAAPRQQHSRTPRQL
LQQQHQQQQQQHQQQQQQQQQQPPEHGPDYSSGVGVDCKTTTILLDGRRVKLQLWDTSGQ
GRFCTIFRSYSRGAQGILLVYDITSRWSFDGIDRWIKEIEEHAPGVPKVLVGNRLHLAFK
RQVTAEQAQAYAERNGMAFFEVSPLCNFNVTESLTELSRVVLMRHGMDRLFWPNSVLSLQ
DLCCRAIVSCTPIHLVDKLPIPVTLRSSLKSFSKANGMNAVIMHGRSYAATTTLRRAGAG
KPTKPTASPPTHSCTRNNCKIS
NT seq 969 nt   +upstreamnt  +downstreamnt
atgggcactcggagcagccccgccaaggcgtttgactacctgctcaaggtgttgctggtc
ggcgacagcgatgttggcaagggcgagatcctggcaagcttggccggccccgaggagcag
gcgggggagcaaaagggggcagcacccaggcagcagcatagccgcaccccccggcagctg
ctacagcagcagcatcagcaacagcagcaacagcatcagcaacagcagcaacaacagcag
cagcagccgccagaacacgggccagactacagcagtggcgtgggagtggattgcaaaacg
acgaccattcttctcgacgggcgtcgcgtcaagctgcagctttgggacacatcgggacag
ggcaggttctgcacgatattccgatcctattccaggggagcacagggtattctgctcgtg
tacgacataacgagccgctggtccttcgacggaattgaccggtggatcaaggagatcgag
gagcacgcgccgggcgtgcccaaggtgctggtgggcaaccggctgcacctggcgttcaag
cggcaggtgacggcggagcaggcgcaggcgtacgccgagcggaacggcatggcgttcttc
gaggtcagccccctgtgcaacttcaacgtgaccgagtcgctcacggagctgtcgcgggtg
gtgctcatgcgacacggcatggaccgcctcttctggcccaacagcgtgctgagtttgcag
gacttgtgttgccgcgccatcgtctcctgcacgcccatccacctggtggacaagctgccc
atccccgtgacgcttaggagcagcctcaagtcgttctccaaggccaacggcatgaacgcg
gtcatcatgcacggacgctcgtacgccgccacgaccacgctaaggagggcgggcgccggc
aagcccaccaagcccactgccagcccgcccacacacagctgtacccgcaacaattgcaag
atctcttaa

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