Petromyzon marinus (sea lamprey): 116952926
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Entry
116952926 CDS
T09614
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116952926 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Other domain-containing proteins
Patched domain-containing proteins
116952926 (PTCHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
116952926
NCBI-ProteinID:
XP_032828546
UniProt:
A0AAJ7XBQ7
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All DBs
Position
49:6616001..6628068
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AA seq
1010 aa
AA seq
DB search
MLGALLHAALQRCLYRLGLLVAGHPAPFLVAPALLAALLGAALSRVSVESKAEDLFAPAH
SLAKLEGALADELFPLERSRQRLYSELHTPGRYTRLIAVARGGGNVLDEGRRLALISLHS
ALVAMPVGRNCTFWDVCSIDWDRECVQDAIVELMGGGAGELGRRRGGIGGGGNGSSSASD
ASRRRSSIIIRYPKARLRDNQEVYIGHQLGGVTLFQTDRVLSARALQITYYLDSAHAASE
LWEREFVTAVERARHRHAHDLALFPFTSSSLQTDFYQSGVVAAPNLAGGFALAMVVGPLL
VVATATMVGRGGGGIGGGGGGGGGGCGGWWTALKNSRGRTRSEDLCFGLLVLAGFVGIAL
TTLATAGVMILTGTPYNSTLIIIPLVALGHGSHGATELLWTWRRLGWGARGPPAREEERL
AATFARSLLPHTMLTALQVITLALGASPLTNTRAVQVFCRCACTATALGYCACVTFLGAC
VALAGKVRALPPRCWPVPSATTTTTMATVAATAAATAVVVAGGERVATAAVVAAAACGGV
ESTAQDLKTPRCICEQPDLISSKEPPCSTATTNTTNTASTAAVTTTTTAAAATSGPHPPD
APPRRFMRDRYGPWISGTYVKPFVVLLYLVYASFSFMGCLQLREASDLTHLVASRSATAR
YRAVQDRFFSDYSPVIGFYIYEPVAYWNASVQEDLLDITRRFVTVSWLEQYTRYLRAANG
TSALPRDLFVSTLCASFLRRREFAHFADDVVLAGPPGERRIAASRVFMVAKTNENTREEI
DGLLEALRKLSLTSRVKFTIHNPAFAFLERYALWVGAPAHAAALAAALALLLSAGLAPPG
AAPAHAWVALCAASVQFGVLGSLGLMGAQLDCAAVLCLVYSLCYSAHACAPLVATFAMGR
GKSRAHWTAAALDAHAAPLLHACLWFCAAVVALAAAPSNLARTVARCLGLASALSAVHCL
VFLPVFLTICPPSKAVKRRRQAGDGEAEEGDAAGAAAGATDGAVDQATSV
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcgcgctgctgcacgcggcgctccagcggtgcctctaccgcctggggctcctc
gtggcgggccacccggcgccgttccttgtggcgcccgctctcctagccgctctgctcggc
gccgccctgagccgcgtctctgtcgagagcaaggctgaggatctgttcgcgcccgctcac
agcctcgccaagctggagggggccctggcggacgagttgttcccgctggagcgatctcgc
cagcggctctactcggagctgcacacgccgggtcgctacacgcggctcatcgcggtcgcg
cgcggaggaggtaacgtgctggacgagggtcgccgcctcgccctcatctccctgcactcg
gctctggtcgccatgcccgtgggacgcaactgcacgttctgggacgtctgctccatcgac
tgggaccgcgaatgtgtccaggatgccatcgtggaactcatgggcggcggtgcaggcgaa
cttgggagaagacgaggaggaataggtggaggaggcaatggcagtagcagcgctagcgac
gcgtcacgccgccgctcctccatcatcatccgctaccccaaagcgcgactgcgtgacaat
caggaggtctacatcggacatcagctgggcggagtgactctcttccagaccgaccgcgtg
ctctccgcgcgggccctgcagatcacttactacctcgactcggctcacgcggcctccgag
ctctgggagagggaattcgtgacggccgtggagagggctcgacacaggcacgcgcacgac
ctggcgctcttccccttcacctcgtcgtccctccagaccgacttctaccagagcggcgtc
gtggccgcaccgaatctcgccggcggattcgctctggccatggtggtcggcccgctgctg
gtggtggcgacggcgacgatggtgggaagaggtggaggaggtataggaggtggtggtggt
ggtggtggaggaggatgtggagggtggtggacggcattgaagaatagcagaggcaggaca
cgctcggaagatctgtgcttcgggctgctggtgctggctgggttcgtgggcatcgctctg
accacgctggcaacggctggagtcatgatcctcaccgggactccctataactccacgctc
atcatcatccccctcgtggcgctgggccacggctcgcacggcgccacggaactgctgtgg
acttggcggcgactgggctggggggcgcgcggccccccagcgcgagaggaggaacgtctg
gcggcgacgttcgcgcgctcgctcctgccgcacacgatgctcaccgcgctgcaggtcatc
accctggcgctgggcgcctcgccgctcaccaacacgcgcgccgtgcaggtgttctgtcga
tgcgcctgcacggccactgcactcggctactgcgcctgcgtcaccttcctgggcgcctgc
gtcgctctggccggcaaggtgcgcgccctgcccccgaggtgctggcccgtgccgtcggcc
accaccaccaccaccatggccactgtggcggcaacagcggcggccaccgccgtggttgtg
gccggaggagagagggtggcgaccgcggcggtagttgccgctgccgcttgcggtggcgtg
gagagcacggcacaggacctcaagacgccacgctgcatctgtgagcaaccggatctcatc
agctccaaggagccgccctgctccaccgcgaccaccaacaccaccaacaccgcctccacg
gccgccgtcaccaccaccaccaccgccgccgccgcaacgtccggcccgcacccgccggac
gcgcccccccgccgcttcatgcgcgaccgctacggcccttggatcagcggcacgtacgtg
aagcccttcgtggtgctgctctacctcgtctacgcctccttctccttcatgggctgcctc
cagctgagggaggcgtccgacctaacgcacctggtggcctcgcgctccgccacggcgcgc
taccgggcggtgcaggaccgcttcttcagcgactacagccccgtcatcggattctacatc
tacgagccggttgcctactggaacgcgagcgtgcaggaggacctgctggacatcacccgg
cgcttcgtcaccgtctcgtggctcgagcagtacacgcgctacctgcgcgccgccaacggc
acgagcgcgctgccccgcgacctcttcgtgtcgacgctgtgcgcctcgttcctgcgccgc
cgcgagttcgcgcacttcgccgacgacgtggtgctcgcgggcccgccgggcgagcggcgc
atcgccgcctcgcgcgtcttcatggtggccaagacgaacgagaacacgcgcgaggagatc
gacggcctcctcgaggccctgcgcaagctgtcgctcacctcgcgcgtcaagttcaccatc
cacaacccggccttcgccttcctcgagcgctacgccctctgggtgggcgcccccgcgcac
gccgccgccctcgccgccgccctcgccctcctcctgtcggcggggctggcgccgccgggg
gccgcgccggcccacgcctgggtggccctctgcgccgcctccgtccagttcggcgtgctg
ggctcgctgggcttgatgggcgcgcagctcgactgcgccgccgtgctgtgcctcgtctac
tcgctgtgctacagcgcccacgcctgcgcgcccctcgtggccaccttcgccatgggccgc
ggcaagagccgggcccactggaccgcggcggccctcgacgcccacgcggcgccgctgctc
cacgcgtgcctctggttctgcgccgccgtcgtcgcgctggcggccgcgccttccaacctg
gcccggaccgtggcccggtgcctgggcctcgcgtccgcgctctccgcggtccactgcctc
gtcttcctgcccgtgttcctcaccatctgcccgccctccaaggcggtgaagcggcggcgg
caggcgggcgacggggaggcggaagagggcgacgccgcaggggctgccgccggcgccacc
gacggcgcggtggaccaagcgacgtccgtgtag
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