KEGG   Petromyzon marinus (sea lamprey): 116953116
Entry
116953116         CDS       T09614                                 
Symbol
GLE1
Name
(RefSeq) nucleoporin GLE1 isoform X1
  KO
K18723  nucleoporin GLE1
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03013  Nucleocytoplasmic transport
pmrn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116953116 (GLE1)
   03015 mRNA surveillance pathway
    116953116 (GLE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116953116 (GLE1)
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116953116 (GLE1)
SSDB
Motif
Pfam: GLE1 Spt20_SEP Flt3_lig TcfC
Other DBs
NCBI-GeneID: 116953116
NCBI-ProteinID: XP_032828859
UniProt: A0AAJ7XBQ6
LinkDB
Position
50:9482247..9508796
AA seq 753 aa
MDAMDKKWDVLGALRNSAQGKLRYERKWSPEVLTEVVPTLSPLAGRVLDLVQQRSQSSPD
EEEQSRVSILSPLTSPRSPPLINCQDLIIGNRSGGSCIRRSDETIFVVSMPEDPAEIEAQ
IRSQEEMYKMRTKDLIIGNRSGGSCIRRCDETIFVVSMPEDPAEIEAQIRSQEEMYKMRT
KVLLHQRCKRLEAAECAMQHQATQQFKRYEEELELEQRLEQERRKDELDKSLVEAQKKLE
KIMEEHQDRTKVLNIRLHEAAEQHRREEEEERRRLAEGHERARRLNALQEEMLALNRRAQ
PSPPQPGTAATAAGAQSGALAQLAELRMRAGQLCDTVATAIRNSSDSGGFGPSPQDLAHA
EQVLAEMRLLAVQVEALRLQEERRLEAEKGDAQRLARELQQQQHQQQQQQEQAEQQKRQQ
KEEEETRNTNQVGLQRTDSSILSWSKELQVKLDETMKNMDGLNSSKDPKIKAIKFELAKA
VSTPVSQICSTSGSHLYDITGKLNSLLSSQTIEVGNRSISVSRHPQGLLYAQYKLGEKLV
KQGEEEVASQHKAAFPIAAVAISLWDRHPALGELLLAHMHRKCPYTVPVFNLPTPGQNQE
DFFRSLGYCYDGKTLEKQDLFLNRMSGMMRLYAAIIATPVPSPSMNKSHPHGLQYGWRWI
AQMLNLEPVSDISATMLYDFLEVAGNAMERAYCSQFWKLLFFIIEEYLPRIEKVSSPAQM
GSVSRLKLFVERCIARRVVPQASGYLSESFWKT
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggacgcgatggacaagaagtgggacgtcttgggagcgctgcgcaactcggctcaaggg
aaactgcgatacgagcgaaaatggagcccggaggtgctgacggaggtggtcccaacgctc
tcgccgctggccggaagagtgctcgacctcgtgcagcaacgctctcagtcctcccctgat
gaggaagagcagagccgagtctccatcttgtcgccgctgacctccccccgctctccgcca
ctcatcaactgccaggacctcatcataggcaacagaagtggcgggagctgtatccgccgc
agcgatgaaaccatcttcgtggtttccatgccggaggacccagccgagattgaagcacag
atccggagccaggaggagatgtacaagatgaggacaaaggacctcatcataggcaacaga
agtggcgggagctgtattcgccgctgcgatgaaaccatcttcgtggtttccatgccggag
gacccagccgagattgaagcacagatccggagccaggaggagatgtacaagatgaggaca
aaagtcctgctgcaccagcggtgcaagcgtctggaggcagcggaatgtgccatgcagcac
caggccacccagcaattcaagcgctacgaggaggagctggagctcgagcagcggctggag
caggagcgacgcaaggacgagctggataagagcttggtagaggctcagaagaagctggaa
aaaattatggaggagcatcaagaccgaacaaaggtgctgaacattcgcttgcacgaggcg
gccgagcagcaccggcgcgaggaagaggaggagcgtcgccggctggcagagggtcacgag
cgcgcgcgccgtctcaacgcgctgcaggaggagatgctggcgctgaaccgacgggcccag
ccgtctccgccgcagcccggcaccgccgccaccgcggctggcgctcagtcgggggcactg
gcgcaactggccgagctgcgcatgcgcgccgggcagctgtgcgacaccgtcgccaccgcc
atcaggaacagctcggatagcggtggcttcggcccaagcccgcaggacctcgcgcatgct
gagcaagtcttggcggagatgaggctcctggccgtgcaggtggaggcgttgaggctccag
gaggaacggcgcttggaggcggagaagggggacgcacagcgcctggcacgcgagctccag
cagcagcagcaccagcagcagcagcagcaggagcaagccgagcagcagaaacggcagcaa
aaggaggaggaggagacccgaaatacgaatcaagtgggcttgcagcgaacggatagcagc
atcctgagctggtccaaggagctgcaggtcaaactggatgagaccatgaagaacatggac
ggcctcaacagcagcaaagaccccaagatcaaggccattaagtttgaacttgccaaggca
gtgtcgacaccagtgtcacaaatctgctccacatcaggctctcacctgtacgatattacg
gggaagctgaactcgctgctgagcagtcagacgatcgaagtgggcaaccgctccatcagc
gtctctcgccacccgcagggccttctctacgctcaatacaaactcggcgagaagctggtg
aaacaaggagaggaggaggtggcgtcgcagcacaaggcggcgttccccatcgcggccgtc
gccataagcctgtgggaccgccacccggccctcggggagctcctcctagctcacatgcac
cgcaagtgcccttacaccgtgcccgtcttcaaccttcccacaccagggcagaaccaagag
gactttttcaggagccttggctactgttacgatggcaagacgctcgagaaacaggacctc
ttcctcaaccgcatgtcaggcatgatgcgcctctatgcagccatcatcgccacgcccgta
ccctctcccagcatgaacaagagccacccccatggcttgcagtacggctggcggtggatt
gcacaaatgctgaacttggagccggtgtccgacatctctgccaccatgctctatgacttc
ctcgaggtggcgggtaacgccatggagcgtgcatactgcagccagttctggaagctgcta
tttttcatcatcgaagaatacttgcctagaatcgagaaggtgtcaagtcccgcgcagatg
ggatcagtcagcaggctgaaactctttgttgagaggtgtattgcccgtcgtgtcgtgccc
caagcgagcgggtatctctccgaaagtttctggaagacctaa

DBGET integrated database retrieval system