Petromyzon marinus (sea lamprey): 116953116
Help
Entry
116953116 CDS
T09614
Symbol
GLE1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
pmrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116953116 (GLE1)
03015 mRNA surveillance pathway
116953116 (GLE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116953116 (GLE1)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116953116 (GLE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Spt20_SEP
Flt3_lig
TcfC
Motif
Other DBs
NCBI-GeneID:
116953116
NCBI-ProteinID:
XP_032828859
UniProt:
A0AAJ7XBQ6
LinkDB
All DBs
Position
50:9482247..9508796
Genome browser
AA seq
753 aa
AA seq
DB search
MDAMDKKWDVLGALRNSAQGKLRYERKWSPEVLTEVVPTLSPLAGRVLDLVQQRSQSSPD
EEEQSRVSILSPLTSPRSPPLINCQDLIIGNRSGGSCIRRSDETIFVVSMPEDPAEIEAQ
IRSQEEMYKMRTKDLIIGNRSGGSCIRRCDETIFVVSMPEDPAEIEAQIRSQEEMYKMRT
KVLLHQRCKRLEAAECAMQHQATQQFKRYEEELELEQRLEQERRKDELDKSLVEAQKKLE
KIMEEHQDRTKVLNIRLHEAAEQHRREEEEERRRLAEGHERARRLNALQEEMLALNRRAQ
PSPPQPGTAATAAGAQSGALAQLAELRMRAGQLCDTVATAIRNSSDSGGFGPSPQDLAHA
EQVLAEMRLLAVQVEALRLQEERRLEAEKGDAQRLARELQQQQHQQQQQQEQAEQQKRQQ
KEEEETRNTNQVGLQRTDSSILSWSKELQVKLDETMKNMDGLNSSKDPKIKAIKFELAKA
VSTPVSQICSTSGSHLYDITGKLNSLLSSQTIEVGNRSISVSRHPQGLLYAQYKLGEKLV
KQGEEEVASQHKAAFPIAAVAISLWDRHPALGELLLAHMHRKCPYTVPVFNLPTPGQNQE
DFFRSLGYCYDGKTLEKQDLFLNRMSGMMRLYAAIIATPVPSPSMNKSHPHGLQYGWRWI
AQMLNLEPVSDISATMLYDFLEVAGNAMERAYCSQFWKLLFFIIEEYLPRIEKVSSPAQM
GSVSRLKLFVERCIARRVVPQASGYLSESFWKT
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgatggacaagaagtgggacgtcttgggagcgctgcgcaactcggctcaaggg
aaactgcgatacgagcgaaaatggagcccggaggtgctgacggaggtggtcccaacgctc
tcgccgctggccggaagagtgctcgacctcgtgcagcaacgctctcagtcctcccctgat
gaggaagagcagagccgagtctccatcttgtcgccgctgacctccccccgctctccgcca
ctcatcaactgccaggacctcatcataggcaacagaagtggcgggagctgtatccgccgc
agcgatgaaaccatcttcgtggtttccatgccggaggacccagccgagattgaagcacag
atccggagccaggaggagatgtacaagatgaggacaaaggacctcatcataggcaacaga
agtggcgggagctgtattcgccgctgcgatgaaaccatcttcgtggtttccatgccggag
gacccagccgagattgaagcacagatccggagccaggaggagatgtacaagatgaggaca
aaagtcctgctgcaccagcggtgcaagcgtctggaggcagcggaatgtgccatgcagcac
caggccacccagcaattcaagcgctacgaggaggagctggagctcgagcagcggctggag
caggagcgacgcaaggacgagctggataagagcttggtagaggctcagaagaagctggaa
aaaattatggaggagcatcaagaccgaacaaaggtgctgaacattcgcttgcacgaggcg
gccgagcagcaccggcgcgaggaagaggaggagcgtcgccggctggcagagggtcacgag
cgcgcgcgccgtctcaacgcgctgcaggaggagatgctggcgctgaaccgacgggcccag
ccgtctccgccgcagcccggcaccgccgccaccgcggctggcgctcagtcgggggcactg
gcgcaactggccgagctgcgcatgcgcgccgggcagctgtgcgacaccgtcgccaccgcc
atcaggaacagctcggatagcggtggcttcggcccaagcccgcaggacctcgcgcatgct
gagcaagtcttggcggagatgaggctcctggccgtgcaggtggaggcgttgaggctccag
gaggaacggcgcttggaggcggagaagggggacgcacagcgcctggcacgcgagctccag
cagcagcagcaccagcagcagcagcagcaggagcaagccgagcagcagaaacggcagcaa
aaggaggaggaggagacccgaaatacgaatcaagtgggcttgcagcgaacggatagcagc
atcctgagctggtccaaggagctgcaggtcaaactggatgagaccatgaagaacatggac
ggcctcaacagcagcaaagaccccaagatcaaggccattaagtttgaacttgccaaggca
gtgtcgacaccagtgtcacaaatctgctccacatcaggctctcacctgtacgatattacg
gggaagctgaactcgctgctgagcagtcagacgatcgaagtgggcaaccgctccatcagc
gtctctcgccacccgcagggccttctctacgctcaatacaaactcggcgagaagctggtg
aaacaaggagaggaggaggtggcgtcgcagcacaaggcggcgttccccatcgcggccgtc
gccataagcctgtgggaccgccacccggccctcggggagctcctcctagctcacatgcac
cgcaagtgcccttacaccgtgcccgtcttcaaccttcccacaccagggcagaaccaagag
gactttttcaggagccttggctactgttacgatggcaagacgctcgagaaacaggacctc
ttcctcaaccgcatgtcaggcatgatgcgcctctatgcagccatcatcgccacgcccgta
ccctctcccagcatgaacaagagccacccccatggcttgcagtacggctggcggtggatt
gcacaaatgctgaacttggagccggtgtccgacatctctgccaccatgctctatgacttc
ctcgaggtggcgggtaacgccatggagcgtgcatactgcagccagttctggaagctgcta
tttttcatcatcgaagaatacttgcctagaatcgagaaggtgtcaagtcccgcgcagatg
ggatcagtcagcaggctgaaactctttgttgagaggtgtattgcccgtcgtgtcgtgccc
caagcgagcgggtatctctccgaaagtttctggaagacctaa
DBGET
integrated database retrieval system