Petromyzon marinus (sea lamprey): 116953314
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Entry
116953314 CDS
T09614
Name
(RefSeq) patched domain-containing protein 1-like
KO
K24682
patched domain-containing protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116953314
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Other domain-containing proteins
Patched domain-containing proteins
116953314
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
116953314
NCBI-ProteinID:
XP_032829300
UniProt:
A0AAJ7U3Z5
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Position
51:complement(915904..961098)
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AA seq
921 aa
AA seq
DB search
MLRQTLRCTLKTCFNRLGFFVSRHPVFFASAPLLLSVLLGASLSRYEVEGSMESLFAPQH
SLAKHERRLVDSLFPINGSRHMLFTDLHSPGRYGRLVVTSRSGRDVLDAPAVDAILRAHA
GVLGMRVSALGFNYSYAHICTLDASSRCLQDALVDVLEQMRRSRSGNRSAAGFRPTYPTT
RLGSGREVFLGHRLGNVSLSDKGVVRSSKALQITYYLSTRDRADELVADSWEEAFCRTLD
KMQESGGTDAAAGGGGRGRGGTGGGSEDAGPDLQFHAFTSSSLRQDFQMSSVASRPFLIA
SAAAVTIAAAVCCSMRDPVRTRPWLGVLGVVTIFLSTLTTAGIINLTEGKYNSTLLGLPF
IVIGHGMHGMFEMLSSWRKSKDELGVKERLALVYTDTMVSFTLTSAMYLVTFGLGASPFT
NLGAVKVFCRSTCVAILFNYLYLLSFFGSCLVFAGYVEARGRHGALCCVAVPTPPPQPPP
PGCCRVTQRSHRDHHRATPGASENPAYDFHVTVWFLREHCGKWLTNTYVKPFVVLLYLVY
VSFAMMGCLQVREGCDLGRLLATDSRTLRYRALQREYFSSYGPAIGFYVYEPLDYWNESV
QEGLRAITAGFVRSSWLESFLAFLEKSNGTAAVGREAFVRALLRSFFAARPFVGFADDLI
LATSNGSVDISASRMYLAAGRTALAREEVSGLLDTLRRRSLASDVKFVIFNPSFVFVDRC
ASSIGYSALTPCAGALAALLLSAPLSAEPLANAWLSLCALSAGFGALGYMTLWDVRVDFV
SALCLVFGVNYAVEHCAPLVAAFAAGQELTRTRWIQVAVELNGSPVLQSLACFAAALAPL
SLAPSNLTYTLFRGLLVAALAVAFHVLVVLPVVLTFFPPSKRRRRRRRGLTLRAPFNERG
QLPLGGPPSTRLQRKALERLR
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccagaccctgcgctgcaccctcaagacatgcttcaatcgcctgggcttcttc
gtgagccggcacccggtcttcttcgccagcgcccctctcctgctctcggtcctgctcggc
gccagcctgagtcgctacgaggtggagggcagcatggagtcgctgttcgctccgcagcac
agcctcgccaagcacgagcgccgtctcgtcgacagcctcttccccatcaacggctcgcgg
cacatgctgttcaccgacctgcactcaccgggccgctacggccgcctcgtggtgacctcg
cggagcgggcgcgacgtgctggacgcgcccgccgtcgacgcgatcctgcgggcgcacgcc
ggcgtgctcggcatgcgcgtgagcgccctcggcttcaactacagctacgcgcacatctgc
acgctggacgcgtcgagccgctgcctgcaggatgcgctcgtcgacgtgctcgagcagatg
cggcgctccaggtcgggcaaccgcagcgcggcgggcttcaggcccacgtacccaacgacg
cgcctgggctcgggccgcgaggtcttcctgggccaccggctgggtaacgtgtcgctcagc
gacaagggagtcgtgcgctcctccaaggcgctgcagatcacctactacctgagcacgcgc
gaccgcgccgacgagctcgtggccgactcgtgggaggaggccttctgcaggactttggac
aagatgcaggagagcggcggcaccgacgctgccgccggcggcggcggccgcggccgcggc
ggtacgggtggcggcagtgaagacgccgggcccgaccttcagtttcacgctttcacgtcg
tcgtccctcaggcaggatttccagatgagcagcgtggcgagcagacctttcctcatagcc
agcgcggccgctgtcaccatcgccgccgcagtgtgctgctccatgcgagaccccgtgcgc
acgaggccctggctcggcgtgctgggagtggtcaccattttcctgtcgacgctcaccacg
gccggcatcatcaacctcacggaggggaagtacaactccacgctgctgggcctgcctttc
atcgtgatcgggcatggcatgcacggcatgttcgagatgctctcctcctggcgcaaaagc
aaggacgagctcggggtgaaggagcgcctggcgctggtgtacacggacaccatggtctcc
ttcacgctcaccagcgccatgtacctggtcaccttcggcctgggcgcgagccccttcacc
aacctgggtgccgtcaaggtgttctgccgcagcacgtgcgtggccatcctcttcaactac
ctctacctgctgtccttcttcggctcgtgcctcgtgttcgccggctacgtggaggcccgc
gggcggcacggcgcgctctgctgcgtcgccgtccccacgccgccgccgcagccgccgccg
ccgggctgctgccgcgtgacgcagcggtcgcaccgcgatcaccaccgcgcgacgccgggc
gcgagcgagaacccggcgtacgacttccacgtgacggtgtggttcctgcgcgagcactgc
gggaagtggctcaccaacacctacgtgaagccctttgtggtgctgctctatcttgtctat
gtgtccttcgccatgatgggatgcctgcaggtacgagagggctgcgacctgggccgcctg
ctggccacggactcgcgcacgctccgctaccgcgcgctgcagcgcgagtacttcagcagc
tacggcccggccatcggcttttacgtctacgagcccctcgactactggaacgagagcgtg
caggagggcctgcgcgccatcaccgccggcttcgtgcgctcctcctggctcgagagcttc
cttgccttcctcgagaagtccaacggcaccgcggccgtggggcgcgaggcgttcgtgcgc
gccctgctgcgctccttcttcgcggcgaggcccttcgtgggcttcgccgacgacctcatc
ctcgccacgagcaacggctcggtggacatctcggcatcgcgcatgtacctggcggccggc
cggacggcgctcgcccgcgaggaggtctcgggcctgctggacacgctgcgccggcgctcg
ctcgcctccgacgtcaagttcgtcatcttcaacccgtcgttcgtgttcgtcgaccgctgc
gcctcctccatcggctactcggcgctcacgccgtgcgcgggggccctcgccgcgctgctt
ctctcggcgccgctctcggccgagccgctggccaacgcgtggctctcgctgtgcgcgctc
tccgccggcttcggtgctctcggctacatgaccctgtgggacgtgcgagtcgacttcgtg
tcggccctctgcctcgtcttcggcgtcaactacgcggtggagcactgcgcgccgctcgtg
gccgcgttcgccgcgggccaggagctcacgcgcacgcgctggatacaggtggccgtcgag
ctcaacggctcgcccgtcctgcagagcctggcctgcttcgccgcggccctcgccccgctc
tcgctggcgccctccaacctcacgtacacgctgttccgcggcctgctcgtggccgcgctc
gccgtcgcgttccacgtgctcgtcgtgctgcccgtcgtcctcaccttcttcccgccgtcc
aagcgcaggaggaggaggcggcgggggctgacactgcgcgcgccgtttaacgagcgggga
cagctgccgctgggcggtcccccgtcgacgaggctgcagcggaaggcgttggagcggttg
agatga
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