Petromyzon marinus (sea lamprey): 116953325
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Entry
116953325 CDS
T09614
Symbol
TULP4
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116953325 (TULP4)
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Other domain-containing proteins
Tubby family proteins
116953325 (TULP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
Plexin_cytopl
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
116953325
NCBI-ProteinID:
XP_032829312
UniProt:
A0AAJ7XCN7
LinkDB
All DBs
Position
51:10454634..10503530
Genome browser
AA seq
2296 aa
AA seq
DB search
MFAALEQSPVLYSDSNLLCASWKGRVPHSERERPVCRRRCYQEGWLALGNAHGVVGVTFC
SSHCRRERPTPQRVNFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWILYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEISLDDSHILCGVWTPDD
QQVLFGTSDGQVIAMDCHGRMLAQVVLHEFDSVQALTWNCPDFLVEDSSESESDGDEGTT
LAQDGPSGEWSAPLQGPRTLLTVMFGSGDVGLMNNYDDMTPTLVKTALKDVTAQWNSAGD
ILAVAGQEKQPSQGLPAEPPGLFSLSRSHAVKFYNAAGFLIYTLDVATQHPISSLCWGHR
DTRLFVTAGPALQVARVEVGVATLQLLCQQVLAAALRDDKAVAKLALPSRLAGYLLSAFT
PTIKPPIPDPSNLRDFVSYPPGGKERLHCTIRRVDEDPEGGGPSYVLFLEHLGGLVPILK
GRRVSKLRPEFVILDPKTDGRLDEVGVCGAACSVFDSCNCSDASDIELGEEALARKSPKT
SRASRSPRLPRINMESRRSPKLTRCSQEGAKSPRLPIRKPSLGSPSLGRRDLYLDDGLQH
NYLAQVTSNIWGTKFKIVGLAPFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKQTQGYV
SVAAFTPGVFSDDEDEGAVAGASGQREPSPPCSMNIPIAPIFSSAQSISPTQNIGLAQSL
LANQNVQLDILTSQRPGQPAASNHSPQQLEVPTNQRLSQVAQNVQYDALGGQRLAQQNLS
NHNAQVDYTLANQRVAQAVLGGQFPHMDVLANQKAAHAHMVNQSVPGEKLTNQRAVQTVL
ANQNTQLDILANQRAAVQAQLANQSAQREMLANPRTSIGGASGHVGPLDVITNQAAVAAA
AVASASERGEAEHYSTLKRNSNPAPGQAIFGGADHPGRTSGSAPAYAQQPAPPPHVQHTP
FPNQQMLHQMQLTAQAMLHSQQTQFNQQALHSQAGQQTTHIQQTQFIQLTAYSQQAMQSH
VPAAASASAREKETAAKSELLSRQYQQQQQLSDRDALGFTSDHNVAVAHIRKGGEALRLP
SAASAATTFTPQSLQDQQQQQQHAQQQHAQQQQHAQQQHLLQHQQQHSQQQPQQHPPQQQ
VQQQQQQHLVQPQQQQQQQPQQQQMAGLACTCPPLASLGYERITTFDSSGNVQEVCRPRA
STGSTSGAGVAGVRTSQSMYGLRSPGPAPSSPQSPFSPQAPQSPFSAQPPTPPFSSSQAP
VSPFGQTSQAPAQPTGLAAAAPVAAAHPSVATAPLAPPHPPAVASYQSATLGHQPSGVSY
QHANAAFQAAGAGYQGGNVAALHQAQFHDGGKQPVVPPPQQQPGVSTVKRGSAELVKSGS
EKPAMAPVAFNLQGQSAQYARAANPVQRVASNTLPSKSSGQSVRLSDGQRVTAQAKAPNA
AFSAETCPCQLRPQQGQHAQAQPQLQQQQQQKGEGYQQQQQARLPGNGGHHGAYVGQSAG
ATATKTMEHSSTRQIQQQIQQHQIHQQQIQALQQHIHQQQQLQQLHQQQLKQQQQQHMHQ
QQQQQMQQQQLQPQQHQLMQQIQQQIQQQQQTQQQQIQQQQTQPPQIQQQQQQPQQQKQS
TVIVHSVSISPLSSQSSYSLLSPADPCRDQTEYVNGAFSEDDASEKSFKKENAAAAATAV
VAKADPGHHKEAGKEGSVEAKKPAECQTDGPSVPITSSPKPSEGRRASSGEMPAAAPTKV
AQSYRGATREMGTDTLKREVSSVPALPKSAQIPGRDGGSAVSKPAQCYRDVQTLNPSRDQ
WLQQGGRAKSVAGHYGTMIPTSHQAQAKHAGNFLPAAVAAAAQRSQNSPRGALSGGNAQY
YATMRPTNMARYQHNYSGSGGAATRHAAVPVAYTGRDASGLPVQYGDGVTVPRQALAMNY
PPTAAAAVCLPAAGHYATLPRPNILVTGEPRASVSVQPSYTDLAQRYATIARAAHAGERG
QPAPHQQHHPHQQQHQQQQHHQGSAGADAAAGGTIMGLAGAEAVCGGARVPDPSYGEMMP
ADCASSCRVDKPGARKDTRLLTDLNSLLASPKAGRGDKKKGGGGSSKGPLGREPLAGAVA
KAPSSKKMLSKGGGGGSGGGGSGSLSGGGGEFQDSSESEHEVVVSGDEFTSSQGPAFRKG
WKGKRGARGAGGMEADEAKGRRSDREDGGRPAGSGSGAGVGGGSGGGGGGGGTQGFVYVM
ANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGKLVMQFGRIDGNAYILDFQSPFSA
VQAFAVALANVTQRLK
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgccctggagcagtccccagtgctctacagcgactcgaacctgctgtgcgca
tcatggaagggtcgcgtgccgcacagcgagcgagagcggcccgtgtgccggcgccgatgc
taccaggaaggctggctcgcgctgggcaatgcgcacggtgtggtgggcgtcaccttctgc
agctctcactgccggcgcgagcgtcccaccccgcagcgcgtcaacttcaacctgcgaggc
cacaacagcgaggttgtgcttgtgcgctggaacgagccataccagaagctggcgacatgc
gacgcggatggaggcatcttcgtgtggatcctgtatgaggggcgctggtctgtcgagctc
gtgaatgaccgcggggcccaggtgagcgacttcacatggagtcacgacggcacgcaggcg
ctcatctcgtaccgcgacggcttcgtgctcgtgggctccgtgagcggccagcgccactgg
tcctcggagatcagcctggatgacagccacatcctgtgcggggtgtggacccccgacgac
caacaggtgctatttgggacgtcagacgggcaggtgattgccatggactgccatgggcgc
atgttggcgcaggtggtgctgcacgagtttgacagcgttcaggcactcacctggaactgc
ccggacttcctggtggaggactcaagcgagagcgagtccgacggggacgagggcaccacg
ctcgctcaggacgggccatcgggcgagtggagcgcccccctgcagggcccacgcacactg
ctcaccgtcatgttcggctcgggtgacgtgggcctcatgaacaactatgacgacatgacg
cccacactcgtcaagaccgccctcaaagacgtgacggcgcagtggaactcggcgggggac
atcctggccgtggccgggcaggagaagcagcccagccaggggctccccgccgagccgccg
gggctcttctcgctctcacggagccacgccgtcaagttctacaatgcggctgggttcctc
atctacacgttggacgtggccacgcagcaccccatttcgtctctgtgctggggccaccgc
gacacgcgcctcttcgtgacggcggggccggcgctgcaggtggcgcgcgtggaggtgggc
gtcgccacgctgcagctgctgtgccagcaggtgctggcggccgccctgcgtgacgataag
gccgtcgccaagttggcgctgccgtcgcgcctcgccgggtacctgctctccgccttcacg
cccaccatcaagcccccgatcccagaccccagcaacctacgtgactttgtgagctacccg
ccgggtggcaaggagcgcctgcactgcacgatccgccgtgtggacgaagaccccgagggc
ggtggaccctcctacgtgctcttcctggagcacctgggcggcctcgtgcccatcctcaag
ggccgacgcgtcagcaagctgcggcccgagtttgtcatactcgaccccaagaccgacggg
cggctcgatgaggtgggtgtttgcggtgctgcctgctccgtgttcgacagctgcaactgc
tcggacgcaagcgacattgagctgggcgaggaggccctcgctcgcaagtcgcccaagacc
tcgcgggcgagccgctcaccccgcctcccaaggataaacatggagtcgcggcgctcacct
aagctgacacggtgcagccaggagggcgccaaatccccgcgccttcccatccgcaagccc
tcgctggggtcgccgagcctgggccgccgtgatctctacctggacgacggccttcagcac
aactacttggctcaagtgacgtccaacatctggggaaccaagttcaagatcgtggggctc
gcccccttccttccggccaacctgggcgccgtgatctacaagacgagcctactacacctg
cagcctcgccagatgaccatctacctgccggaggtgcgcaagcagacccagggctatgtg
tcggtggcggccttcacgccgggggtctttagcgatgatgaggacgagggcgcagtggcc
ggggcctcaggccagcgtgagccaagtcctccgtgctccatgaacatccccatcgccccc
atcttcagctcggcccagtcgatctctcccacgcagaacatcggcttggcacagagcctg
cttgccaatcagaatgtgcagctcgacatcctgaccagccagaggccgggccagcctgcg
gcctccaaccacagtccacagcagctggaagtcccgaccaatcagcggctgtctcaggtg
gctcagaatgtgcagtacgacgccctgggtggccagagactagcgcagcagaatctgtcc
aatcataatgcgcaggtcgattacacgctggccaatcagagggtggcccaggcggtgctc
gggggtcagttcccgcacatggacgtgctggccaatcagaaggcggcgcacgcgcacatg
gtgaaccagtcggtgccgggagagaagctcaccaaccagagggcggtgcagacagttctg
gccaaccaaaacacccagctggacattctggccaatcagagggccgcggtgcaggcccag
ttggccaatcagagcgcccagcgggagatgctggccaatccccgcacgtccatcggcggg
gcgagcggtcacgtggggccactcgacgtcatcaccaaccaggcggcggtggcggctgcg
gcggtggcctcggcgtcggagcgcggcgaggcggagcactacagcacactgaagcgcaac
tccaaccccgcgccagggcaggccatcttcgggggagcggaccaccccggcaggaccagt
ggctcggcaccggcgtatgcccagcagccagctccgcctccgcatgtgcagcacacgcca
ttccccaaccagcagatgctccaccagatgcagctcactgcccaggccatgctgcatagc
cagcagacgcagttcaaccagcaggcgctccactcgcaggccggccagcagacaacgcac
atacagcagacgcagttcatccagctgacggcatacagccagcaggccatgcagtcacac
gtcccggcggcggcctcggcctcggcccgggagaaggagacggccgccaagagcgagctg
ctgtcgcggcagtaccagcagcagcagcagctgtcagatcgcgatgcgctgggcttcacc
agcgaccacaacgtggccgtggctcacatccgcaagggaggggaggcgctgcggctgccc
tctgcagccagcgccgccaccacgttcactccccagagtctgcaggatcaacagcagcag
cagcaacatgcgcagcagcagcatgcacagcagcagcagcatgcacagcagcagcattta
ctacagcaccaacaacagcactcacaacagcaaccacagcagcatccaccccagcaacag
gtgcagcagcagcagcagcagcaccttgtgcagcctcagcaacagcagcagcaacaaccc
cagcagcaacaaatggcagggctggcctgcacgtgccctccgcttgccagcttgggctac
gagcgcatcaccacgttcgacagcagcggcaatgtccaggaggtgtgccgcccccgcgcc
tccacggggagcacttctggagcgggggtcgcgggggtgcgcaccagccagagcatgtac
ggcctgcgtagcccggggcccgctcccagctccccgcagtccccattctccccgcaggcc
ccgcagtccccgttctccgcacagccgcccacgcctcccttctcctcctcccaggctccc
gtctctccctttggccaaacgtcgcaggcgcccgcccagccgacggggctggcggcggcg
gcgccagtggcggcggcgcacccgagcgtggccacggcgccactggcgccgccgcacccg
cccgccgtcgccagctaccagtcggcgacgcttggccaccagccttcgggggtgtcctac
cagcacgccaatgccgccttccaagccgccggcgccggataccaggggggcaacgtcgcc
gccctccatcaggctcagttccacgatggcggcaagcagccggtggtgccgccaccacag
cagcagccgggggttagcacggtgaaaagagggagtgcggaactcgtgaagtcgggcagc
gagaagccggcaatggcgcccgtagcgtttaacctgcagggccagtcagcgcagtacgcg
cgggccgccaacccagtgcagagagtcgcctccaacacgctgccctcgaaaagctcgggg
cagtcggtgaggctgagcgacggccagagagtcacggcgcaggcgaaggctcccaacgcg
gccttctccgcagagacctgcccctgtcagctgagaccgcagcaggggcagcacgctcag
gcccagccgcagctgcagcagcagcagcaacagaagggggaggggtaccagcagcagcag
caggccagactgccgggaaacggcggccatcacggtgcctatgtggggcaaagtgccggt
gccacggctaccaaaacgatggagcactcgagcacacggcaaatccagcaacagattcag
cagcaccagattcaccagcagcaaatacaagcgctgcagcagcatatccatcagcagcag
cagctgcagcagctgcatcagcagcagctgaaacaacaacagcagcagcatatgcatcag
cagcaacagcaacagatgcagcaacagcaattgcaaccgcagcagcatcagctgatgcag
caaatacaacaacagattcagcaacaacagcagacgcagcaacagcagattcaacaacag
cagacacagccaccacaaatacagcagcagcaacaacagccgcagcagcagaagcagagc
actgtgatcgtgcactctgtgagcatctcgccactgagctcacagtcctcgtacagcttg
ctgagcccggccgacccctgccgcgaccagaccgagtacgtgaacggggcgttctctgag
gatgacgcatctgaaaaatcctttaagaaagaaaatgcggccgcagcagcaacagcagtg
gtggccaaagcggacccgggccatcacaaagaggccggcaaagaagggagtgtggaggcc
aagaagccggcggagtgccagacggatggaccatccgtgccgatcaccagttcccccaaa
ccatcggagggtcgcagggcctcgtcgggagagatgcctgcggccgcgcccaccaaagtt
gctcagagctatcgcggagccacgagagagatgggcacggacacgctgaagagagaggtc
tccagcgttccggccttaccgaagtccgcgcaaattcccggccgagacggcggctccgcg
gtgagcaagcccgctcagtgctatagggacgtgcagacgctgaacccatcgcgagaccag
tggctgcagcagggcggcagggccaagtctgtagccgggcactatggaactatgattccg
acgtcacaccaagcgcaggccaagcacgccggaaactttctcccggcagcggtagctgcc
gcagcacaacgatcccagaacagccctcgcggtgcgctcagcggtggcaatgcccaatat
tatgccaccatgagacccaccaacatggcccgataccagcacaactacagtggtagcggc
ggtgccgccacgcgccacgccgccgtgcccgtggcctacaccggcagagacgccagcggg
ctgccggtgcagtacggtgatggcgtgacggtgccgcggcaggcgctcgccatgaactac
ccgcccactgccgccgcggccgtatgcctcccggcggccggccactacgccacactgcct
cggcccaacatcttggtgaccggagagccacgggcgagcgtgagcgtgcagccgtcatac
acggacctggcgcagcgttacgccaccattgcccgggcagcgcatgccggagagcgggga
cagccggcgccgcatcagcagcatcatccccatcagcagcagcatcagcagcagcagcat
caccaaggttctgcaggggctgatgccgcggccggcggcaccatcatgggcctggcaggg
gccgaggccgtgtgcggtggggcgcgggttcccgaccccagctacggggagatgatgcca
gcggattgtgccagctcctgccgggttgacaagccaggcgcacgcaaggacacacgtctg
cttactgacctcaactcactgctcgcgagtcccaaggccggccgtggggacaagaagaag
ggtggcggaggcagcagcaagggcccgctaggccgggagccgctggctggcgccgtcgcc
aaggccccgtccagcaagaagatgctgtcaaagggcggcggcggtggcagcggtggcggg
ggcagtggcagcctgagcgggggcggcggggagttccaggacagctcggagagcgagcac
gaggtggtggtgagcggggacgagttcacctcgagccagggccccgcattccgcaagggc
tggaagggcaagcggggggcacggggagcgggtggcatggaggcagacgaggccaaaggc
cggcgcagcgacagggaggacgggggccgcccggcaggaagcggcagcggggccggggtt
ggcggcggaagcggcggcggtggcggcggcggtggcacgcagggcttcgtctacgtcatg
gccaacaagcagccgctgtggaacgaggccacgcaggtctaccagctcgacttcgggggc
cgcgtcacccaggagtcggccaagaacttccagatcgagctcgacgggaaactggtgatg
cagttcggcaggatcgacgggaacgcctacatcctcgacttccagtccccgttctcggcc
gtgcaggcctttgccgtggctctggccaacgtcacccagcgcctgaagtga
DBGET
integrated database retrieval system
