Petromyzon marinus (sea lamprey): 116953354
Help
Entry
116953354 CDS
T09614
Name
(RefSeq) runt-related transcription factor 3-like
KO
K08367
runt-related transcription factor 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116953354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116953354
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
116953354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
116953354
NCBI-ProteinID:
XP_032829380
UniProt:
A0AAJ7U664
LinkDB
All DBs
Position
51:8348231..8401444
Genome browser
AA seq
492 aa
AA seq
DB search
MHIPVDAGVSRRFTPPSTALLHAAHHHHHHHHHHHGSSSSSSKMTSDAPPLSHQDGALMG
VKMRGAGGGGGGGGGGGGGGGGGGGGGGGGIGGGAHDRPMGDVLADHPGELVRTDSPNFL
CSVLPSHWRCNKTLPVAFKVVALGDVPDGTLVGVMAGNDENYSAELRNASAVMKNQVARF
NDLRFVGRSGRGKSFTLTITVFTSPPQVATYHRAIKVTVDGPREPRRHRQRLEDPVKAGA
AMFPERLCELEQFRRSGMRVPPHAGGGAHPAAPRASLGAHAAFNAQPQPQMQASSELGAF
SAPPRVSLESQFAAGLSSLPEGRFGDPRVHYPGAFAYTPGGPASSALGLGMSPMGGGPAA
SAAVAAAAAAARYHAAAAASYHHLPPPYPGSQQGQGQGSAFQAGAPAPFQHLYYGGAPST
SSYQFPPPVMQQQQQSGVGGEERPLPAGPLINNPALPSTHQDAGVHDPEGSQGSSPTSLS
SGRLEEAVWRPY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcatattcccgtagacgcgggcgtcagtcgtcgctttacgccgccgtccaccgccttg
ctgcatgccgcccaccatcaccaccatcaccaccaccaccaccacggcagcagcagcagc
agcagcaagatgaccagcgacgctcctcctttgagccaccaagacggagctctgatgggc
gtgaagatgcgcggcgctggaggcggtggtggaggcggcggtggaggcggcggtggaggc
ggtggtggaggtggaggtggaggcggtggaatcggaggtggagcgcacgaccggcccatg
ggggacgtgttggctgatcacccgggagagctggtgcgcactgacagccccaacttcctg
tgctctgtgctgccctctcattggcgctgtaacaagacgctgcccgtggccttcaaggtg
gtggcactcggcgacgttccggacgggaccctggtgggagtcatggccgggaacgatgag
aattactcggccgagctgcgcaacgcgtctgcggtcatgaagaatcaagtggcgaggttt
aacgacctccgcttcgtgggaaggagcggccgaggtaaaagcttcacgctgaccatcacg
gtgttcacaagccccccacaagtcgccacctaccaccgcgccatcaaggtcacagtggac
gggcctcgcgagcccagacgacacagacagaggctggaggaccccgtgaaggccggcgcg
gcaatgttcccggaacgtctgtgcgagttggaacagttccgacgatcggggatgcgggta
cccccacacgctggagggggggcgcatcccgcggccccccgcgcctccctgggggctcac
gccgccttcaacgcgcagcctcaaccccagatgcaggcctcctcggagctgggcgccttc
tctgcgccaccgcgcgtctccctcgagtcgcagtttgccgcgggcctctcctccctcccc
gagggtcgcttcggggacccgcgcgtccactacccgggggccttcgcctacaccccgggg
ggaccggcctcctcggcactgggcctgggcatgtcacccatgggcggtgggccggctgcc
tcggccgcggtggcagcagccgcggccgccgcgcgctaccacgcggcggccgccgcctcg
taccaccacctccccccgccgtacccgggttcgcagcagggacaggggcagggctcggcg
ttccaggcgggcgccccagcgcccttccagcatctctactacggtggcgcgccgtccacg
agcagctaccagttcccgccgcctgtgatgcagcagcagcagcagtccggcgtggggggc
gaggagcggccactccctgcgggaccgctgatcaataacccagcgctgccctccacgcac
caggacgccggggttcatgaccctgagggcagccagggcagctcgcccaccagcttgtcg
tccggccgcctggaggaggccgtgtggaggccgtactga
DBGET
integrated database retrieval system
