Petromyzon marinus (sea lamprey): 116953402
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Entry
116953402 CDS
T09614
Symbol
ASCC3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116953402 (ASCC3)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116953402 (ASCC3)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
116953402 (ASCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ASCC3_N
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
116953402
NCBI-ProteinID:
XP_032829466
UniProt:
A0AAJ7U423
LinkDB
All DBs
Position
51:complement(1431397..1543688)
Genome browser
AA seq
2228 aa
AA seq
DB search
MLMTTELPRLTNALRSFTNVSNSSFEPDTDSDLDLQSKRQLVKQTSGNVGLSWKKVVDFL
SCSIIKSQRSQLSDDLRALLQVAKRIVGSEEDTESVECAAAFLFETFAPGEEEEEEGGGA
SAAREERGSRLRGALGPVPPGAARDASDVVARIVSRLPEPSRLSELSSPSKEEQDDDGNT
CAPFGQNIPFSSDGFDLEPADKLIARRHLEPPNQLSLDYSRFVKAAGGREEGAAGQASCV
DGGWLRSQVEEFVAAGSSSLPSAELCSSLFEALISDKSDNALQNELFELLGVGGFDFITK
LLQQRKKIVDCAMEPEDEGPPVNRGLAGGTGAPVGPSVARQVTVQSETERLLGKAARREE
KRSLKRDRRNGDDDAAAATGVNGFDPLALRLQREEALLNAQIAPILLPRAQWTEPERFPN
VYDAYAEARKTSAFVGGSKMLLPEGFSVQNNKMYEELSIPPTPPLPIGIAEKPVFVRDLD
EIGQLAFSGTQKLNRVQSLVFETAYHTNENLLICAPTGAGKTNVAMLTVLREVRQHVGPG
GLLNSGDFKIVYVAPMKALAAEMTSNFGKRLQPLGIAVRELTGDMQLTKGEILRTQMLVT
TPEKWDVVTRKSVGDVALSQLVRLLILDEVHLLHDDRGPVLESLVARTLRQVESTQSMIR
IVGLSATLPNYMDVARFLHVNPYIGLFFFDSRFRPVPLSQTFIGVKTTNKMQQMHDMDEV
CYDKVLEQVKAGHQVMVFVHARNATVRTAMALREMAKNNGEAGFFTPPQSAEYGTAFKQV
ERSRNKPMRELFPDGFSTHHAGMLRPDRSLVEGLFSRGLVRVLVCTATLAWGVNLPAHAV
IIKGTQIYDAKRGTFVDLGALDVMQIFGRAGRPQYDTFGLGIIITSHDKLGRYLTLLTQQ
NPIESQFQASLQDNLNAEISLGTVTNVQEAVRWLSYTYLYVRMRANPLAYGINYNTQQAD
PSLHKFREQMVVDAGRKLDKARMIRFDERTGYFSPTDTGRTASHFYIKYNTIETFNDYFG
PHLTESDVLSMVCKAEEFEQIKVREDELGELEQLADGYCLLPVAGGVENGYGKVNILLQT
YISRGDVDCFSLVSDLSYIAQNAARIVRSLFETALRKRWPTMTSRLLALSKAIDRRLWGW
AHPLRQFSALPHTTLEKLEARKMTVDKLRDMSSHDIGHMIHHVAMGQKIKQCVQQIPTLA
LEASIQPITRTVLRVRLSITADFTWCDQVHGSVGEPWWIWVEDPTNDHIYHSENFMILKK
QVLSQEAQCVTFTIPIFEPLPSQYYVRAVSDRWLGSEAVCAINFQQLILPERHPPHTELL
DLQPLPVSALGDARLEALYRFTHFNPVQTQIFHTLYHGDGNVLLGAPTGSGKTVAAELAI
FRIFNAHPGAKAVYIAPLKALVRERMEDWKVRLEQKLGKRVVELTGDVTPDARAIASADL
IVTTPEKWDGVSRSWHSRSYVKQVALLVIDEIHLLGDDRGPVLEVIVSRTNFISSHTEKP
VRVVGLSTALANARDLADWLAIKQVGLFNFRPSVRPVPLEAHIHGFPGQHYCPRMATMNK
PTFQAIRTHSPAKPVLIFVSSRRQTRLTALDLIAFLAGEDNPKQWLHTDETEMEHIISTV
KDSNLKLCLAFGIGMHHAGLHERDRRTVEELFVNTRIQVLIATSTLAWGVNFPAHLVIIK
GTEYFDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVIFVHDLKKDFYKKFLYEPFPV
ESSLLEVLADHLNAEITSGTITSKQDAMDYITWTYFFRRLIMNPSYYKLESIDHQVINNF
LSGLVGSALFDLEFSGCIEVGEDNRSIQPLSPGKISSYYYLKHGTVRMFREQLRADSRVE
DLLVTLSDASEYAELPVRHNEDSLNLELAGHVSLDGVAQRPMDSAHTKALLLLLAHVGRV
PLPSPDYATDTKSVLDQALRVCQAMLDTVAEQGWLVSALCVTHLVQMLVQARWLHDHSLL
TVPNVERQHLHLFRKWSTGRRTEAKGGGFKGPIDSLPQLIAACDGREATLASILSPELSP
AHISQVWAYVSALPLLDVSVTVRGCWDDGGEEEVEESGGRGGGGGSRTERAVPSADGVPR
AAQRWLRLHADQEYVLTVRLRRHAAHHGKGKAESKAQCPRFPKPKDEAWILVLGEVDRKE
LLALKRVGFVRGATTVSLAFYAPERTGRCIYTLYVMSDCYLGLDQQYDVHLEVIPASIRA
QVNSEVCE
NT seq
6687 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgacaacggagctgcccaggctcacgaatgccctgcggtcgttcaccaatgtc
agcaatagcagctttgagccagacacggactcagaccttgacctgcagtccaagaggcag
ctggtcaaacagacctcgggcaacgtggggctgagctggaagaaggtggtcgacttcctg
tcgtgcagcatcatcaagagccagcgcagccagctgagcgacgacctcagagccctgctg
caggtggccaagcggatcgttggcagcgaggaggacaccgagtcggtggagtgcgccgcg
gccttcctcttcgagacttttgctccaggcgaggaggaggaggaggaggggggaggagcg
agcgccgcccgcgaggagcgagggagccgtctgcgcggcgcgctgggtcccgtgcccccc
ggcgccgcccgtgacgccagcgacgttgtcgctcggatcgtgtcccggctgcccgagccc
tcgcgcctctccgagctctcctcgcccagcaaggaggagcaggacgacgatggcaacacc
tgcgctccgtttgggcagaacatccccttctcctccgacggcttcgacctggagcccgcc
gacaaactcatcgcccggaggcacctcgagccgccgaaccagctgagcctcgactactcg
cgcttcgtgaaggcggcgggcggcagggaggagggggcggcgggccaggccagctgcgtg
gacggcggatggctgcgcagccaggtggaggagttcgtggccgctggcagctcgagtttg
ccgtccgccgagctctgctcgagcctcttcgaggcgctcatttcggacaagagcgacaat
gcgcttcagaacgagctgttcgagctgctgggagtgggcgggtttgacttcatcacaaag
ctactgcagcagaggaagaagattgtggactgtgccatggagcctgaggatgagggtcct
ccggttaatcgtggcctggccggaggaacgggggcccccgtcggccccagcgtcgcccgc
caggtgaccgtgcagtcggagacggagcggctgttggggaaagcggcgcgccgcgaggag
aagcgcagcctcaagcgtgatcgtcgcaacggcgatgacgacgccgccgccgccaccggt
gtcaacggattcgatcctctggccctgcggctccagagggaggaggcccttctgaacgct
cagatcgcaccgatactcctgccccgggcacagtggaccgagccagagagattccccaac
gtgtacgacgcctacgcggaagcgcgcaagacgtcggcctttgtcggaggctccaagatg
cttctgccagaaggcttctcggtgcagaacaacaagatgtacgaagagttgagcatccca
cccactccaccactgcccatcggaatcgcagagaagccggttttcgtccgcgacctcgat
gagatcggacagctggccttcagcggcactcagaagctgaaccgcgtgcagtcgctggtg
ttcgagacagcgtaccacaccaacgagaacctgcttatttgcgcccccacgggcgctggc
aagaccaacgtggccatgctgaccgtgctgagagaagtccggcagcacgtgggaccaggt
gggctcctcaacagcggagacttcaagattgtgtacgtggcccccatgaaggctctcgcg
gccgagatgacgagcaacttcggcaagcgcctccagccgcttggcatcgcggtgcgagag
ctcacgggagacatgcagctcaccaagggggagatcttacgcactcagatgctggtgacg
actccggagaagtgggacgtggtgacgcgtaagagcgtgggcgacgtggccctgagccag
ctcgtacgcctgctcatcctcgacgaagtccacctcctccacgacgaccgggggcccgtc
ctcgagagcctggtcgcgcgcacactgcgccaggtggagagcacccagagcatgattcgc
atcgtgggactgtccgcaaccctgcccaactacatggacgtggcacggttcctgcacgtg
aacccgtacatcggcctcttcttcttcgacagccgcttccggcccgtgcccctgagccag
acgttcatcggcgtcaagacgaccaacaagatgcagcaaatgcacgacatggatgaagtg
tgttatgataaagttctggagcaagtcaaggctggacaccaggtcatggtgttcgtgcac
gctcgcaacgcaaccgtccgcacggccatggctctgcgggagatggcgaagaacaacggg
gaggcggggttcttcacgccgccgcagtcagccgagtacggcacggcgttcaagcaggtg
gagcgctcccgcaacaagccgatgcgcgagctgtttccggacggcttcagcacgcaccat
gccggcatgctgcggcccgaccgctcgctcgtcgaagggctgttctcgcgcgggctcgtg
cgcgtcctcgtgtgcaccgccacgctcgcctggggcgtcaacctgcccgcccacgctgtc
atcattaagggcacgcaaatctatgacgccaagcgcggcaccttcgtggacctcggggcg
ctggacgtgatgcagatcttcgggcgcgccgggcggccccagtacgacacgttcggcctc
ggcatcatcatcacgtcgcacgacaagctcgggcgctacctcacgctgctcactcagcag
aaccccatcgagagccagttccaggccagcctgcaggacaacctgaacgcggagatttcc
ctgggaactgtgaccaacgtgcaggaggccgtgaggtggctgagctacacgtacctgtac
gtccgaatgcgagccaacccactggcgtacggaatcaactacaacacgcagcaggccgac
ccgtcgctgcacaagttccgcgagcagatggtggtggacgcgggcaggaagctggacaag
gcgcgaatgattcgctttgacgagcgcacgggatacttctcgccgaccgacacgggacgc
acggccagccacttctacatcaagtacaacaccatcgagactttcaacgactactttggc
ccgcacctcacggaatcagacgtgttatcgatggtgtgcaaggcagaggagtttgagcag
atcaaggtgcgcgaggatgaactcggcgagctcgagcagctggccgacggctactgcctg
ctgcccgtggccggcggcgtggagaacggctacggcaaggtgaacatcctgctgcagacg
tacatctcgcgcggggacgtcgactgcttctcgctcgtatccgacctctcctacatcgcc
cagaacgcagcgcgaatcgtgcgctctctcttcgagacggcgcttcgcaagcgctggccc
accatgacgagccgcctcctggccctgagcaaggccatcgaccgccggctctggggctgg
gcccacccgctgcgccagttctcggcactgccgcacacgacgctcgagaagctggaggca
cgcaaaatgacggtcgacaaactccgagacatgagcagccacgacataggacacatgatc
caccacgtggcaatgggtcagaaaatcaagcagtgcgtccagcagatcccgacgctggcc
ctagaggcctccatccagcccatcacgcgcaccgtgctccgcgtgcgtctctccatcacg
gccgacttcacctggtgcgaccaggtccacggctctgttggcgaaccgtggtggatctgg
gttgaggaccccaccaacgatcacatctatcactcggagaacttcatgatcctcaagaag
caggtgctgtcccaggaggcgcagtgcgtcacgttcaccatccccatcttcgagccgctg
ccttcgcagtactacgtgcgtgccgtgtcggaccgctggctgggctcggaggccgtgtgc
gccatcaacttccagcagctgatcctgccagagaggcacccgccacacactgagctgctg
gacctgcagccgcttcccgtgagcgcactgggtgacgcgcggctggaggcgctctaccgc
ttcacgcacttcaaccccgtgcagacgcagatcttccacacgctgtaccacggggatggc
aacgttctgctgggcgcacccacgggctccggcaagaccgtggcggcagagctcgccatc
ttccgcatcttcaacgctcaccccggagccaaggcggtgtacatcgctcccctaaaggcc
ttggtgcgggagaggatggaggactggaaggttcgactggaacagaagctgggaaagagg
gtggtggagctcacgggcgatgtgaccccagacgcccgtgccatcgcgagcgccgacctg
atcgtcacaaccccggagaagtgggacggtgtgagccgcagctggcacagccgctcctac
gtcaaacaggtggcgctgctcgttatcgacgagatccacctgctgggcgacgatcgaggt
ccagtgctggaagtgatcgtgtctcgcacgaacttcatctcgtcgcacacggagaagccg
gtacgcgtggtcgggctgtccacggcgctcgccaatgccagggacctcgccgattggctt
gccatcaaacaggtgggcctcttcaacttccgcccgtctgtgcgtcccgtgccccttgag
gctcacattcacggcttcccagggcagcactactgccctcgcatggcaaccatgaacaag
ccgaccttccaagcgatccgcacgcactccccggccaagcccgtgctcatcttcgtgtcg
tctcggaggcagacgcgtctcaccgccctcgacctcatcgctttcctggccggcgaggac
aatcccaagcagtggcttcacacggacgagaccgagatggagcacatcatctcgacggtg
aaggactcgaacctgaagctgtgtctggcgttcggcatcggcatgcaccacgcgggcctg
cacgagcgcgaccgccgcaccgtggaggagctctttgtcaacaccaggatccaggtgctg
attgccaccagcacgctggcctggggggtgaacttcccagctcacctggtcatcatcaaa
ggcaccgagtactttgacggaaaaacccggagatacgtggacttccctatcacagacgtc
ctgcagatgatgggccgtgccgggcgccctcagttcgacgatcaaggcaaggcggtgatc
ttcgtgcacgacctcaagaaggacttctacaagaagttcctctacgagcccttcccggta
gagtcgagtttgttggaggtactcgctgaccatctcaatgctgaaatcacctctggcacc
atcacctccaagcaagacgccatggactacatcacctggacctatttcttccgtcggctc
atcatgaaccccagctactacaaacttgagagcattgaccatcaggtgatcaacaacttc
ctgtcggggctggtgggaagtgccctctttgacttggagttctcgggatgtatagaggtc
ggggaggacaaccggagcatccagccactctccccgggcaagatctcctcctactattac
ctgaagcacggcacggtgcgcatgttccgtgaacagctccgtgccgacagccgcgttgag
gacctcctcgtcaccctgtccgacgcctccgagtacgctgagctgcccgtgcgccacaac
gaagactccctcaacctggagctcgcgggccacgtgtccctcgacggcgtggcccagcgg
cccatggacagcgcccacaccaaggcgctgctgctgctactggcgcacgtgggccgcgta
ccgttgccctcgcccgactacgccaccgacaccaagtccgtgctcgaccaggccctccgc
gtgtgccaggccatgctggacacggtggcggagcagggctggctcgtgtcggctctgtgc
gtcacccacctggtgcaaatgctggttcaggcgcgctggctgcatgatcactcgctgctc
acggtgcccaacgtggagaggcagcacctgcacctgttcaggaagtggagcactggccgg
aggacggaagccaagggaggaggattcaagggccccatcgacagtttgcctcagctcatc
gcggcttgcgacggccgggaagcgacgctcgcctctatcctctccccggagctttccccc
gctcacatctcacaggtgtgggcctacgtgtcggcgctgccgctgctggacgtgagcgtg
accgtgcggggctgctgggacgacggcggcgaggaggaggtggaggagtcgggggggcga
gggggaggaggggggagccgcactgaacgggccgtgccgagcgccgacggcgtcccgcgg
gcagcgcagcggtggctccggctgcacgccgaccaggagtacgtgctgaccgtgcggctg
agacggcacgcggcgcaccacggcaagggcaaggcggaaagcaaggcacagtgcccacgc
ttcccgaagcccaaggacgaggcctggatcctggtcctgggcgaggtcgaccgcaaggag
ctgctggctctcaagcgcgtgggcttcgtgcgcggcgccaccaccgtctcgctggcgttc
tacgcccccgaacgcacgggccggtgcatctacaccctgtacgtaatgagcgactgttac
ctgggcctggaccaacagtacgacgtacacctggaagtcatccctgccagcatcagagca
caggtcaactcggaggtgtgcgagtga
DBGET
integrated database retrieval system
