Petromyzon marinus (sea lamprey): 116953516
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Entry
116953516 CDS
T09614
Name
(RefSeq) transcription factor HIVEP3-like
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116953516
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116953516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_16
NOA36
Keratin_matx
Motif
Other DBs
NCBI-GeneID:
116953516
NCBI-ProteinID:
XP_032829667
UniProt:
A0AAJ7U6R9
LinkDB
All DBs
Position
3:complement(10709608..10827737)
Genome browser
AA seq
2507 aa
AA seq
DB search
MLSGKNPKSPQPKSESRIGPDVAGQARVAAVSCAADSAGGWVSDCALAGSLRAMEPGQNL
VHSKPAAAADADSALSEARARASSSHESAARTTRVSSLEPQPPHRPATFVDISKPQSPEA
ERWPGSHGDLDRACGRETHAASPPALPSQQLLSLQPQPPPHPAPHIYSVTLPPSCGAEQA
GYYRRPAASRDAAPSTEVSAAAQPYVLHPGGSAVRPVCEQVTDLLRKERRPKKPGKYICS
YCGRACAKPSVLQKHIRSHTGERPYPCAPCGFSFKTKSNLYKHRKSHAHALKAGAGPSGD
EGEGAFLESGSVDEQEGRSEGDETTDSEDESGLEEMAQASSSMGPEPPTMTSKNVAVPPT
YPAEAEGKWVGSLAAATCLQPVGMVPEHGMVVPSQPPAPRSRSPKLHEATRERPTTCHPG
EHQAVRQKLAWTLKLAERKRLESDQVQGLQRQPRCPPHPSLQLLSPMSKSSTDSGYFSRS
ESAEHQGSPPGAAPAMTYREMVLGKNVPPGLRGTDAYVSAAVAETVARPGQGKLPLEKRL
IEEHISRLILHNEAVMDDKELDSVKPRRMSWSRRGSFDFSKQHPECDPDTSRGSTPRHRL
ADEHHRPPHGHASSICPEAARWSAEAAPLNRSNSTPATPGYAGRAEATGRLPGPSRSSRS
FDEATPPRGKAQPYPGHQRTLVRQKAIEVPLAGESQAAPPPEFSELKSVSMDEGKRGRSL
GETLTRRYRSLEESYSQEESAENDAFLQVRRRKGSMYECEICGVRYRKAENFAVHKKFYC
SELYAPKLKQTAPKVPLESETPQRDTQPQMVHFKVSAVASEGVVGVRKRRKEKTAGEEEE
SPPEKPTAPLHGHFLTSWQQTVPASSSAPAHLHREHYASASLSSAPAERGGEPAATCRPA
TTYTVAAAEGHPSQRGDRICSLHAPHSRGGEDIHSAVERALEAVPAVMRTGSKEISVIQH
TKSLSRPSSFERAESVEATQGEGEPTTQSSGVSLLKESSTGQYERAEGAETQGITFSVPY
QQQQQQQPVQQTTLLVPEILVTEDTDKDPTEAARKEQEKAAQEFQWPQRSETLSKLPAEK
LPPKKKRLRLADLQHSSNESSTESSSLSRSMSGESSSISRGSSFSASFERDDTATKAQSA
VAANVAAGAIVAAASKPSEFLTVPSAHHHREVKEMCRSSSEQGPAPEQPVQLSETRSKSL
DYGSGTQHPAPTAPAVTSTAAIGTSRRRGILVRQASLSGSPDSPEPALPQGETSSRPSWR
SEASDTKEQHVQRTSSTGMSPRTPEQSASPKPSASRRDAQPPPAQRMFVPPPPAPILISS
ALGHLPAVGTLQPVYSLSHLHLPLSLPAMPLHRHQLPLHFQIPQAPSPPPLQRVYGCPLK
IPVVQGLSTLSHLQLPLQQLGVPRFHVPQIAVQTNVPFIIPAPPSFAQRAFVPRELSDAK
GSGSPLFQAALGRGFTPLHPLHLPRMSQAIVATEHPRLLTPVTSLMVPVRIQTPFPSYSY
SMYTTLSQMLVTQAQSRPQPVVICQWNNRQLVSGALGPRPRPGRATASPHVSPITPASPA
SPSHQLLSEKMQLSSLPVSGLEGVSEMPLPVAGKRMLSPASSFEIAMEIRGQNQKRAKEE
DHSVGSEEGIERASEPERVKASSPVRSRPPTLVRQHCTTKTLESSSTTPVNSTRDLASTD
SFSKLEVSVVLEQVTQGEETDKECKPSISTQVLPSVRFTSNMPPAPDTAYDDLLPGKCSP
PKSTPPIKIVISDMAGTATEVSTSLCMQEIGREQAVSADARDVPNLQPTTTVTWCFLVNC
RPSPVPQDENTESVYASWGRDLDHRGNCNPLGLSTKAALGLLCSRQRTTMSIYTSTMITP
ARADQMVQSSQWKPGLAKVDSRESGVGGVGGVGGVGGVGGVGGVEIPAAPEGPVEPVAAA
TTPGGAREAGDSAAEACDPTGPRPKSNRIRIFKGGYKSNEEYVYVRGRGRGKYVCEECGI
RCKKPSMLRKHIRTHTDLRPYSCRVCCFAFKTKGNLTKHMKSKAHSKKCLEVGVNPTLLE
DQLEEDDPGAEEERLQCWEEVHQFSDVEESEGAEDDDVDNEDDDEEEDEEGGGGGGGGVV
ELAGADAHALRSAGTSRSVSGERVGPGDERIRSAPARRGGRLARVESEDSVRAHGQEEDE
EEDEDEEDEEEEEATRRFSHGGASEGLHFSLRAFGDFGGRAASVIALTLPTRAPSRGPEL
GARDDTEEPMVMTPDRNIRGLEELTPQLLVTATAATAPLQNFLSHLPLHSQGLAWAPRRT
VSVGGIHMVHAGVAAPPVRGAACGMGGEAPQSGVPSTSLPGAQLAGAEESPPQRAEALAR
SRAAGERPASGPPPPPPPPSPAVATSVLAGLCSTAGFLQAQSTTGQTHQHHEPHLHHHHH
HLRHLYRHQQQQQQQDTGIATANSTESSPNQHLETLHYGLAACTEEETQPAVSDQARPTG
TWAEERPGPAIAVAATVTAMSESRAGATGSAVASRDETRDVREEEAP
NT seq
7524 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcggaaagaatccgaaatctccgcagcccaaaagtgagtcaaggatcggtcca
gatgtcgccggccaagctcgagttgccgctgtctcgtgtgcagctgattctgcggggggt
tgggtgtccgactgcgccctggcaggctcgctgagagccatggagccgggacaaaatctt
gtgcacagcaagcccgctgcagccgccgacgcagacagcgccctttccgaagcgcgggcg
cgagcttcttcttcgcacgagagtgccgcccgcacgacgagagtcagcagcctcgagcca
cagccccctcatcgcccagccaccttcgtcgacatctcaaagccgcagagcccggaggcc
gaacggtggccgggatctcacggcgatctggatcgtgcttgcggccgcgaaactcacgcc
gcctctccaccggcgctcccatcgcagcagctgctgtcccttcagcctcagccaccgccg
cacccggcgccgcacatctacagcgtgacactcccgcccagctgcggggcagagcaggca
ggttactaccggcggcccgccgcatcccgcgatgccgcaccgtcgacggaggtgtccgcg
gcggcacagccatacgtcttgcaccccggagggtccgctgtccggcccgtgtgcgagcag
gtcaccgacttgctgcgcaaggagaggaggccaaagaagccaggcaagtacatctgctca
tactgcgggcgggcgtgcgccaagccgagcgtccttcagaagcacatccgctcccacact
ggcgagcggccatacccctgcgccccctgcggcttctcctttaagacgaaaagcaatctg
tacaagcatcgcaagtcgcacgcgcatgctttaaaggccggggcagggcccagcggagac
gagggggagggggccttcctcgagtcgggcagcgtggacgagcaggagggccgctccgag
ggggacgagaccacggacagcgaggacgagagcggcctcgaggaaatggcccaagcgagc
tcatcaatgggccccgagcctccgacgatgacgagcaaaaacgtagcggtgcctccgact
tatcccgccgaagcagagggaaagtgggttggctccttggcggcggccacctgcttgcag
cccgtgggaatggttccggagcacggaatggtggtgccgtcgcagccacccgcgccgcgc
agcaggagccccaagctgcatgaggcgacgagggagcggccgaccacgtgccaccccgga
gagcaccaggcggtgcggcagaagttggcgtggacgctgaagcttgccgagcggaagagg
ctcgagagcgaccaagtgcagggcctccagaggcagcccaggtgcccgccgcacccctcg
ctacagctgctgagcccaatgagcaaaagcagcacggactcgggctacttctctcgttcg
gagagcgccgagcaccagggcagcccgcccggcgcggcgcccgccatgacgtacagggag
atggtgctgggaaagaacgtgcctcccggtctgagagggaccgacgcgtacgtgtccgct
gccgtcgcggagaccgtcgcgaggcccgggcaggggaagctgccgttggagaagaggctc
atagaggagcacatctccaggctgattttgcacaacgaggcagtgatggacgacaaggag
ctggacagcgtgaagccgcgccgcatgtcatggtcgcggaggggcagcttcgacttctcg
aagcagcacccggagtgcgaccccgatacgtcgaggggctcgaccccgcggcaccgcctt
gccgacgagcatcacaggccgccgcacggccacgcctcctcgatctgccccgaggcggcc
cgatggagcgcggaagcggcgccgctcaaccggagcaactcgacgccggcgacccccggc
tatgcggggcgggccgaggccaccgggcgcctgccaggcccgtcacgctccagccgctcc
ttcgacgaggcgacgccgccgcgcgggaaggcgcagccgtacccggggcaccagcgcacc
ctcgtgaggcagaaggccatcgaggtgcccctggccggcgagagccaggcggcgccaccg
ccagaattctccgagctcaagtccgtgtcgatggacgaagggaagaggggccgctccttg
ggggagaccctaacgaggcgctaccgaagcttggaggagagctactctcaggaggagagc
gcggagaacgatgccttcttgcaggtgaggagacggaaagggtccatgtacgaatgcgaa
atctgcggcgtccgctacaggaaggcggagaactttgctgtgcacaagaagttttattgt
tcggagctgtacgcccccaagctcaagcagactgcccccaaggtgccgctcgagtcggag
acgccgcagcgggacacgcagccgcagatggtgcacttcaaggtgtccgcggtggcttca
gagggcgttgtgggtgtgcggaaacgcaggaaggagaagacggctggagaagaagaggag
tctccaccggaaaagcccacggcgccgctgcacggacactttctgacatcgtggcaacaa
accgttcctgcatcatcgtctgcgcctgcacacctccatcgggaacattacgcatccgcg
agcctcagtagcgcccctgcagagaggggtggcgaaccggctgcgacctgccgcccggcg
acgacgtacacagtagcggcggcggaagggcacccttctcagagaggcgatcgcatttgc
tcgttacacgctcctcatagcagaggaggggaggacattcactcggccgtcgagagggcg
ctcgaggcggtgccggccgtgatgcggaccggcagcaaggagatttctgtgattcagcat
acaaagtctctgagccgacctagctccttcgagagggcggagtcggtggaagcgacgcag
ggcgagggggagccgacgacacaatcgagtggcgtgtctttactcaaggaaagttcgaca
ggccagtatgagagggcggagggcgcagaaacacagggtattacattttcagtgccttat
cagcagcaacagcagcagcagccggtacagcagaccaccctcctggtgccagagatactc
gtgacggaggacacggacaaagacccgacagaggccgcgaggaaggagcaggagaaggcg
gcccaggagttccagtggccgcagaggagcgagacgctgtcgaagctccccgccgagaag
ctgcccccgaagaagaagcgcctgcgcctggccgacctgcagcactcctccaacgagtcg
agcaccgagtcatcgtcgctgtcacgcagcatgagcggcgagtcgagcagcatctcgcgc
ggctccagcttctccgcatccttcgagcgagacgacacggccaccaaagcacaaagcgcc
gtcgctgccaatgtcgctgccggtgccatcgtcgccgccgctagcaaaccgtccgagttc
ctcaccgtgcccagcgcgcaccaccaccgcgaagtcaaggagatgtgccgctcatcctcg
gagcaaggacccgccccggagcagccggtgcagctgtccgaaacccgtagcaagtcgctg
gactacggcagcggaacgcagcatcctgcgccgacggcgccagcggtcacgtcgacagcg
gcgattggcacgtcgaggcgaagaggaatcttggttcgtcaggcgtctttaagcggaagc
ccggacagccccgaaccggccctgccccagggcgagacgtcttctcggccgtcgtggcga
agcgaagcttcggacacaaaggagcagcacgtgcagagaacgtcttcaaccgggatgtct
ccccggacacccgagcagagtgcgtctccaaagccctcggcgtctcgtcgtgacgcacag
ccgccacctgcgcagcggatgtttgtcccacctccaccggctcctatattgatcagcagc
gccctgggccacctgcccgccgtgggtacgctgcagcccgtctactccctttcccacctg
cacttgccactctcccttccggccatgccgctgcaccgacaccaactgccgctgcatttc
cagatcccgcaggcgccgagcccgccgccgcttcagcgagtctacggctgtccgctgaaa
atccccgtcgtgcagggcctgagcacgttgtctcacctccagctgcccctccagcagctc
ggcgtgccccggttccacgtgccgcaaatagcggtgcagacgaacgtgccgttcatcatc
cctgcaccgccatcgtttgcgcagcgcgcgtttgttccgcgagagctctcggacgccaag
gggagcggaagcccactcttccaggccgctttggggcgcggcttcacacccctgcacccg
ctgcacctaccacggatgtcacaagcgatagtcgcaactgaacatccgagacttctgacg
ccagtaacttccctcatggttccggtgaggatccagactccctttccttcgtacagctac
agcatgtacaccaccctctcacagatgctggtcacccaagcccaaagcagacctcagcca
gtcgtcatctgccagtggaacaatagacagctcgtgtcgggtgccttgggccctcgtccc
agacccggccgtgcgaccgcaagccctcacgtgtctcccatcacgccagcatcacccgcc
tcaccgtcgcaccagcttttgagtgagaagatgcagctgtcatcgctgccggtgtccggg
ctggagggagtgtccgaaatgcctctgcccgtggctggcaagcgcatgctgtcacccgcg
agcagctttgaaatcgccatggaaatccgcggacaaaaccagaagcgggccaaggaagaa
gaccattcggtcggctcggaggagggcattgagcgggcgtccgagccagagagggtcaaa
gcatcttcacccgtcaggtcaaggccgcccacgttggtgagacagcactgcaccaccaag
actttggagagcagttccaccactcccgtgaactccacccgcgatttagcatccacggac
tccttttccaaactggaagtctctgtcgtgctggagcaggtgactcaaggagaggaaacg
gacaaggagtgcaagccgagcatttcaacgcaagttctgccatccgtgcgcttcacgagc
aacatgccacctgccccagacactgcctatgacgacctccttcctggaaagtgttcccct
ccaaagtccacgccaccgataaaaattgtcatctcggacatggccggcactgcaactgag
gtatcgacgagtctgtgcatgcaggagattggccgagagcaggcagtctcagcggacgcc
cgggatgttccgaatctccagcccaccacgaccgtcacctggtgcttcttggtgaactgc
cggccgagccccgtaccgcaggacgagaacacggagtcggtctatgcctcctgggggcgc
gacttggaccacagaggcaactgcaatcccctaggcctgtccaccaaggccgcgctgggc
ctcctgtgttcacggcagaggaccaccatgtccatctacaccagcacgatgattacccct
gcacgggctgaccagatggtacagtccagccagtggaagccagggttggctaaggttgac
tcccgggaaagcggggtcggcggggtcggcggggtcggcggggtcggcggagtcggcggg
gtcggcggggtcgagatcccggctgcccccgagggccctgtggaaccggtggcggcggcg
acaacgcccggcggtgcgcgggaggctggagacagcgccgcggaggcctgcgaccccacg
ggacccaggcctaaatccaaccgcatccgcatcttcaagggagggtacaagtcaaacgag
gagtatgtgtacgtgcgcggccgcggacgaggcaagtacgtgtgcgaggagtgcggcatc
cgctgcaagaagcccagcatgctgcgcaagcacatccgcacgcacacggacctacggccc
tactcctgccgcgtctgctgtttcgccttcaagaccaaagggaatctcacgaagcacatg
aagtccaaagctcacagcaagaagtgtctcgaggtcggggtcaacccaaccttgctggag
gaccagctcgaggaggacgatccaggagccgaggaggagcggctgcagtgctgggaggag
gtgcaccagttttccgacgtggaggaatcggagggggcagaagacgacgacgttgacaac
gaagacgacgacgaggaggaggacgaggagggaggcggcggcggcggcggcggcgtcgtc
gagctcgcgggcgcggacgcccatgccctccgctcggccgggacgagccgctccgtttcc
ggagagcgggtgggtccgggcgacgagaggatccgctccgctcccgctcggcgcggggga
cggctcgcgcgcgtggagtcggaggatagcgtgcgagcccacgggcaggaggaggacgag
gaggaggatgaagacgaggaggacgaggaggaagaggaggcgacgcggcggttttcgcac
ggcggggcgagcgagggcctgcacttctcgctgagggcgttcggggactttggcgggagg
gcggcgagcgtcatcgcgctcaccctgcccacgcgggccccgtcccgtggtcccgagctg
ggcgcgagagacgacacggaggagcccatggtgatgactcctgaccggaacatcagagga
ttggaggagctgacgccacagctcctggtgacagcaacggcagcaaccgcgcctctgcag
aacttcctcagccacctccccctgcactcgcagggcctggcctgggccccgcgccgcaca
gtgtccgtgggcgggatccacatggtccacgcgggtgtggcggcgccccctgttcgcggc
gccgcctgcggaatgggcggcgaggccccgcagagcggagtaccgagcacaagcctcccg
ggcgcgcaactcgccggcgccgaggagtcgccgccgcagcgagccgaggcgctcgcgcgg
agccgcgcggcgggggagcggccggcgagcggtcccccgcctcctcccccaccaccatca
ccggcggtggcgacgagcgtcctcgccggtctttgctcgacggcgggatttctgcaggcg
caatccacgactggacagactcatcagcatcacgaaccccatctacatcatcatcatcat
catcttcggcatctttatcggcatcagcagcagcagcagcagcaggataccgggatcgcg
acggcaaactcgacggagtcgtccccgaatcagcacttagaaacgttgcactacggcctt
gccgcatgcacggaagaggagacgcagccggcggtgagcgaccaggcccggccaaccggc
acttgggcagaagagaggccggggccggcgatagcggtggcagcgacagtgaccgcgatg
agcgagagccgtgccggggccactggcagcgccgtcgccagccgagatgaaactcgtgac
gtgcgagaggaagaggcgccctga
DBGET
integrated database retrieval system