Petromyzon marinus (sea lamprey): 116953523
Help
Entry
116953523 CDS
T09614
Symbol
WDR41
Name
(RefSeq) WD repeat-containing protein 41 isoform X1
KO
K23610
WD repeat-containing protein 41
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116953523 (WDR41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116953523 (WDR41)
Membrane trafficking [BR:
pmrn04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
116953523 (WDR41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
116953523
NCBI-ProteinID:
XP_032829672
UniProt:
A0AAJ7XD08
LinkDB
All DBs
Position
52:complement(7989599..8009596)
Genome browser
AA seq
514 aa
AA seq
DB search
MESGNRSPLRLHESPLKMAVVVEGVSVAGAAGAGRFRLKRRNFRGKESSLRLLLLLDLAE
RAPSRSLRRMWSWLVGKRDAVESKEVLEIGDVQPSNPFTELQVLAGHTDIVRLLVRLDDY
RFASAGDDCRVIIWNVKSGEKMHVCQGHSRPITAMTVLSTAVGDLEIHKLQSTVLLTASS
DKTIIMWDINTGQPLKILANSEGSLISVKCLLVLREEALWLSGGKYLLLWSQDGTLLSKV
ATHRQEEVSSLIRIKDSLVAAAMGKCLVLYGLEYGKETPRQRQLQQLKALTVHAEHVHSL
LSLQGGWFASGSLDGELILWNSGNLAEHRKVALHAPISPQLQKSHCSQAYPCSIAHLSTD
SQCVFAAVGSGICVYDLTSQRLVACQRNAHNSQVLQVVKLQESGLLVSCSEDGTTRIWKL
HSPAAAQLPRRRTASERWSLGLVGDLIGHSGALQMLLDFEKHGLASCSTDQLIIVWKEGE
RASLYRNSLARNLNRHYQQTCKSETTSFDDQNII
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggggaaccgttcgcctcttcgccttcacgaatccccactgaagatggcggtc
gtcgtggagggggtttccgtagccggagcagcaggggccgggcgcttccggctcaagcgt
cgcaacttccggggcaaagagagctcactgcgacttctgctgctgctggacctcgcagag
cgagcgccgtcacgaagcctcaggaggatgtggagctggctggtggggaagagggacgcg
gtggagagcaaagaggtactggagattggtgatgtgcagccatcgaatccatttactgag
ctccaggttctggccggacacacagatatagtgcgtctcttggttcgcttggatgactac
aggtttgcctcggcaggtgatgactgcagggtcatcatatggaacgtgaagagcggggag
aagatgcacgtgtgtcagggccactcgcgtcccatcaccgccatgactgtgctgtcgacc
gctgtaggtgacctggaaatccacaagcttcagtcgacggtgctcctcactgcttcctcc
gacaaaaccatcatcatgtgggatatcaacacgggacagcctctaaagattctcgccaac
tccgaaggatctctcatctcggtcaagtgtctgctggtgctgagagaggaggctctctgg
ctgtctggtgggaagtacctgctgctgtggagccaggatgggaccctgctctcaaaagtg
gccacccaccgtcaagaagaggtgtcttcgctgattcgcattaaagactccctggtcgcg
gctgcaatgggcaaatgtttagttctgtacggcctggagtacggcaaggaaaccccccgc
cagaggcaactccagcagctgaaggcgctgacggtccacgcggaacacgttcacagcctg
ctgagcctgcagggcggctggtttgcgagcggctccctggacggcgagctcatcctgtgg
aactctggcaacctggcggagcatcgcaaggtggcgctgcacgcacccatcagtccgcag
ctccagaagtcccactgctcccaagcctacccgtgcagcatcgcccacctatcaaccgac
tcccagtgtgtgttcgcagcagtcgggtcgggaatctgcgtgtacgatctgacgtcgcaa
aggctggtcgcctgccaaaggaacgctcacaactcgcaggtgctgcaagtcgtcaagctg
caggagagtggcctgctggtgagctgctctgaagacggcaccacgcgcatatggaagctc
cactcgccggctgcggcgcaacttccgcgtaggaggacggcatctgagcggtggtcgctg
gggctcgttggggacctcatcggccactccggtgccctgcagatgctgctcgactttgag
aagcacggcttggcgagctgctcgacggatcagctgattatcgtttggaaggaaggagag
cgggcgtccctctacaggaactctctcgcacgcaacctgaatcggcactatcagcagacc
tgcaagtctgagaccacatcgtttgatgaccagaacattatctag
DBGET
integrated database retrieval system
