Petromyzon marinus (sea lamprey): 116953533
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Entry
116953533 CDS
T09614
Symbol
PRPF3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116953533 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116953533 (PRPF3)
Spliceosome [BR:
pmrn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116953533 (PRPF3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TFIIA
DUF3772
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
116953533
NCBI-ProteinID:
XP_032829702
UniProt:
A0AAJ7XDX8
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Position
52:3525114..3555340
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AA seq
859 aa
AA seq
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MALTKKDVEELKPWVEKTVKKVLGFTEPTVVTAALNCVGKGMDRGKTEEQLKAFLDESTS
RFVEKLFDAVEEVKNYKFSKATMEKNRKRELKDVFGDDPDTPREAAPVPAPAAKRKRVPR
FAEDEPSVDGDGDGVMPAPPAEPSMLTKTQIKQMMEAATRQIEERKKQLSFMSTAGGPQG
GGQHQQQQQQHQQQQQQHQQQQQPAPAPRPSVQSPQGGGGNSGGNNTITTASSGASGGGG
GISSGGGGLQSGTPPAHLFTFMGSTIAPSQAATFMNDAIEKARKAAELQARIQAQLGQLA
SRGGGLGGAGLGGADLGGGANAAASAAAAALGIGGPGLGIGAGASGVSALGMALGMFPGM
GLGFNLGGAGLGMGVGLPPGLSLAAFQMGGIAEQLAGKDAATAAAAAGGAAPGAVPGARP
APLILDDQGRTVDAAGRAVELTHRMPTLKANIRAVRRQQFKQQLKERPTEDVEAQHFYDP
RVPAEVASRPRRHFRFHDKGRFEKIAQRIRCKAQLEKLQSEIAQAAKKTGIQSATKLALI
APKKEQQDDEVPEVEWWDYYILPSSYDHDSDVHLELEKGQLDGITNLVEHPAQINSPSAD
TEIAVESDKPVTLGIYLTKKERKKLRRQTRREAQKELQEKIRLGLAPPPEPKVRISNLMR
VLGTEAVQDPTKVEAHVRAQMAKRLRAHEEANAARKLPVEQRREKKIKKLKEDTTSGVHI
SVYRIRDLTNPSKKFKIETNANQLFLTGGVVLHKDVNVVVVEGGPKSQKKFRRLMMNRIK
WAEESNSKESDSLSSEIRRRKPNSCTLVWEGTAKERSFGEMKFKQCPTESLAREHFRKHG
VEQYWDLCLSESVLEMTED
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacaaaaaaggatgtggaggagctaaaaccgtgggtggagaagacggtgaag
aaggtgctgggcttcacggagcccacagtcgtcaccgccgccctcaactgcgtgggcaag
ggcatggaccgcggcaagacggaagagcaactgaaggctttcctggacgagtcgacgtct
aggtttgtggagaagctgttcgatgctgttgaggaggtgaaaaactacaagttttccaag
gccaccatggagaagaatcgcaaaagagagctgaaagacgtgtttggggacgacccggac
acccccagggaggccgcgccggtaccggcgccagccgccaagcgcaagcgcgtgccgcgg
tttgccgaggacgagccctcggtggacggagatggggacggggtgatgccggcgcccccg
gccgagcccagcatgctcaccaagacccagatcaagcagatgatggaggcggcgacgaga
cagatcgaggagcgcaagaagcagctgagcttcatgtccacggcaggagggccgcaggga
ggggggcagcaccagcagcaacagcagcagcaccagcagcagcagcagcagcaccagcag
cagcagcagccggcgcctgcaccacgccccagcgtccagtctccgcagggcggtggtggc
aacagcggtggcaacaacaccatcaccaccgcgagcagtggggccagcggcggtggtggc
ggtatcagcagcggcgggggaggcctccaatcgggcacgccgcccgctcacctcttcacc
ttcatgggcagcaccatcgcgccgtcgcaggccgccaccttcatgaacgacgccatcgag
aaggcgcgcaaggcggccgagctgcaggcgcgcatccaggcgcagctggggcagctggcg
tcgcgcgggggaggactcgggggcgctggactcgggggcgccgaccttggcggcggggcc
aacgccgcggccagcgccgccgccgccgccctggggatcggcgggcccgggctgggcatt
ggagccggcgccagcggggtttcggcgctgggcatggcgctggggatgttccccggcatg
gggttggggttcaatctcgggggcgcggggttgggaatgggcgtcgggttgccccctggg
cttagcctggccgcgttccagatgggcgggatcgccgaacagctggccggcaaggacgcg
gccaccgcagcggcagccgccggcggcgcggcccccggcgcggtccccggcgcccgtccg
gcccctctgatcctggacgaccagggccgcacggtggacgcggcggggcgcgccgtggag
ctcacgcaccgtatgcccacgctgaaggcgaacatccgcgccgtgcggcgccagcagttc
aagcagcagctgaaggagaggcccacggaggacgtggaggcgcagcacttctacgacccg
cgcgtgcccgctgaggtggcctcgcgcccgcgacgccacttccgcttccacgataagggc
cgcttcgagaagatcgcgcagcgcatacggtgcaaggcgcaattggagaagctgcagtcg
gagattgcgcaagccgccaagaagacgggcatccagtcggccaccaagctagcgctcatc
gcgcccaagaaggagcagcaggacgacgaggtccctgaggtggagtggtgggactactac
atcctgccgtcgtcctacgaccatgactccgacgtgcacctggagctggagaagggtcag
ctcgacggcatcaccaacctcgtggagcatcccgcgcagataaacagccccagcgcggac
accgaaattgccgtggagagcgacaagccggtgacgctgggaatctacctgaccaagaag
gagcgcaagaagctgcgccgtcagacccgcagggaggctcagaaggagctgcaggagaag
attcgcctgggtctggctcccccgcccgaacccaaagtgaggatctcgaacctcatgcgc
gtgctgggcacggaggccgtgcaggaccccaccaaagtggaggctcacgtgcgggcacag
atggccaagcggctcagggcccacgaggaggcgaacgcggcgcggaagctgccggtggag
cagcgccgggagaagaagatcaagaagctgaaggaggacacgaccagtggcgtgcacatc
tccgtctacaggatccgtgacctgacgaacccgtcgaagaagttcaagatcgagacgaac
gcgaaccagttgttcctcaccggaggcgtggtcttgcacaaggacgtcaacgtggtggtc
gtcgaaggcggaccaaaatcccagaagaagttccggcggttgatgatgaatcgcatcaag
tgggccgaggaatcaaactcgaaagaatctgacagtctgtcgagtgagattcgccggagg
aaacccaactcctgcactctggtttgggagggcacggccaaggagaggagctttggagaa
atgaaattcaagcagtgtcccaccgagagtttagcgagagagcattttcgcaagcacggt
gtggagcagtactgggatctgtgcttgagtgagtccgtgctggaaatgacggaggactga
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