Petromyzon marinus (sea lamprey): 116953557
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Entry
116953557 CDS
T09614
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04260
Cardiac muscle contraction
pmrn04261
Adrenergic signaling in cardiomyocytes
pmrn04814
Motor proteins
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116953557
04820 Cytoskeleton in muscle cells
116953557
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116953557
04261 Adrenergic signaling in cardiomyocytes
116953557
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116953557
04147 Exosome [BR:
pmrn04147
]
116953557
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
116953557
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of microglial cells
116953557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
ATG16
CENP-F_leu_zip
Lebercilin
MscS_porin
PUMA_CC
SlyX
DUF745
FPP
DUF16
EzrA
Laminin_I
TMF_DNA_bd
DUF1664
Cnn_1N
DUF7518
XhlA
DUF4200
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
116953557
NCBI-ProteinID:
XP_032829753
UniProt:
A0AAJ7U4M1
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Position
52:2104857..2145134
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AA seq
284 aa
AA seq
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MDAIKKKMQMLKLDKENAIDRAEQAESDKKAAEEKTKQLEDELVALQKKLKGTEDELDKY
SEALKDAQEKLEVAEKKAADAEADVASLNRRIQLVEEELDRAQERLTTALQKLEDAEKAA
DESERGMKVIENRAGKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAEISETKCAELEEELKTVSNNLKSLEAQSDKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYNQKLKYKAVSEELDHTLNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctgaagctggacaaggaaaatgccatcgac
agagccgagcaggccgagtccgacaagaaagcggcagaggagaaaaccaagcagctcgag
gacgagctggtggctctgcagaagaagctcaaggggacagaggatgagctggacaagtac
tcggaggccctcaaggacgcccaggagaagcttgaggtcgccgagaagaaggcggctgac
gctgaggctgacgtggcatcgttgaacaggcgcatccagctggttgaggaggagctggac
agagcgcaggagcgtctcaccaccgccctgcagaagctggaggatgccgagaaggcggcc
gacgagagcgagagaggcatgaaggtgattgagaaccgggctggcaaggatgaggagaag
atggaacttcaggagattcagctcaaagaggccaagcacatcgctgaggaggctgaccgc
aagtacgaggaggtcgcccgtaagctggtcatcattgagggagatctggagcgcacagag
gagcgcgcggagatctcagaaaccaaatgtgccgagctggaggaagaattgaaaactgtc
tccaacaacctcaagtctctggaggctcagtccgataagtactcgcaaaaagaggacaag
tacgaggaggagatcaaggtgctcacggacaagctgaaggaggctgagacccgtgccgag
tttgccgagaggtccgtggcgaagctggagaagaccatcgacgatctggaagacgagctg
tacaaccagaaactgaagtacaaggctgtcagcgaggagctggaccacaccctcaacgac
atgacctccatctaa
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