Petromyzon marinus (sea lamprey): 116953662
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Entry
116953662 CDS
T09614
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03018
RNA degradation
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116953662 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
116953662 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116953662 (LSM7)
03041 Spliceosome [BR:
pmrn03041
]
116953662 (LSM7)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116953662 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
116953662 (LSM7)
Spliceosome [BR:
pmrn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116953662 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
116953662
NCBI-ProteinID:
XP_032829949
UniProt:
A0AAJ7U6A1
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All DBs
Position
52:complement(9082946..9086725)
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AA seq
102 aa
AA seq
DB search
MADKEKKKKESIFDLSKYLDKSIRVKFQGGREASGMLKGYDPLLNLVLDGTIEYLRDPDD
QYKLTEDTRPLGLVVCRGTSVVLICPLDGMEAIPNPFIQQDG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggagaagaaaaagaaggagagcatctttgacctgtccaagtacctggac
aagagcattcgcgtcaagttccagggcggcagggaagcgagtggcatgctcaagggatac
gatccgctcctcaacctggtgctggatggcactatcgaatatctgcgagacccggatgac
cagtacaagctgactgaggacacgcgaccgctgggcctcgttgtgtgccgcggaacgtcc
gtggtgctcatctgtcctctggacggcatggaggccatccccaaccccttcatacaacag
gacggctga
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integrated database retrieval system
