Petromyzon marinus (sea lamprey): 116953829
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Entry
116953829 CDS
T09614
Symbol
SART1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116953829 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116953829 (SART1)
04121 Ubiquitin system [BR:
pmrn04121
]
116953829 (SART1)
Spliceosome [BR:
pmrn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
116953829 (SART1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
116953829 (SART1)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116953829 (SART1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
116953829
NCBI-ProteinID:
XP_032829970
UniProt:
A0AAJ7XD53
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Position
53:complement(10497296..10521291)
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AA seq
823 aa
AA seq
DB search
MGSSKKHKEKDRGGGEEERRRGERGERRPRGHRSRSRSRDRDRDRERDRTRSRRERRERG
ERGERGEDASAGGPPPEKRVRRDHDEGDEGGAVTEGGDVPAPKSASGNNSLSIEETNKLR
AKLGLKPLETSDAAKQSEEGSSKDNPVLFHPENLASIKKKAVLKEKLAALKEKRLINQKL
GKVRTLAEEEDWLDDAAVWVQRSRKLQQEKDMAQKRAKVLEEMDAEFGISSLVEEEMGAK
KEPSYTSKDLTGLSVEHDIETFQEGQTVILTLKDKAILDEEDGDVLVNVNMVDKEKADKN
VELKKKKPVYQPYEEDESVDDLAIMRQRAVLSKYDEEIDGEKRKSFQLEHGGTADGSWER
ELQSVRDTLRSQAQRLETAVPQIANEFYSPEEMVTFRKTKRRVKKIRRREKTLRADQLAP
LPGKTSGVAASDLGSRRRQGALPPCSVEGEGEQAEGESEEVRGDGRGGEERQEEGHDADT
TVQDMQMSDDEEELVTPASPVVVEEDEAEQELQRQLDKQRRLRQKRDLRDAAIRVATVVR
SMQSGERRGENDGGEDEEEDDEEGMVLGERDRHGHIVFNSTSEFCRTLGEIPTYGLSGNR
DDRDDLLDFEQSDSEMRADEEDEEGAGWSAVNLEEERERVETPTGAGAILEEEPMITGGL
ASALKLCNTKGYLETEIAKMARVKNPHKTLPSALYTIEDKNHGSDDKYSRREEYRAYGQE
FKDKEHYRPDVRIEYVDETGRKLTPKEAFRQLSHRFHGKGSGRMKTEKRQKKLEEEHMLR
KMSSSDTPLGTVALLQEKQKAQKTPFIILSGSGKSMNANTITK
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcgaagaagcacaaggagaaggatcgcgggggaggagaggaggagaggagg
cgcggggaacgcggggaacggcgcccgcgcggccatagatcgcgctccaggtcgcgagac
agagaccgagacagggagcgggatcgaaccaggtcgcgccgggagaggagggagcgaggg
gaacgcggggagcgcggggaggacgcctcggcgggcggaccccccccggagaagcgagtg
agacgcgaccacgatgagggagatgaagggggtgccgtgactgagggtggagatgtccca
gcaccaaagtcggcatctggaaacaattccttgagtattgaagaaaccaataaactgcga
gccaagctgggactgaagcctctggagaccagcgatgctgccaagcaaagtgaagagggg
agttccaaggacaaccctgtgctgttccaccctgagaacctggcgagcatcaagaagaag
gctgtgctcaaggagaaactcgcggcactcaaagagaagagactcatcaaccagaagctg
gggaaggtgcgcacgctggccgaggaggaggactggctggatgatgccgcagtatgggtg
cagcgcagccgcaagctgcagcaggagaaggacatggcgcagaagagggccaaggtgctg
gaggagatggacgccgagtttggcatcagcagtcttgtggaggaagagatgggagccaag
aaggagccgtcatacacctccaaggacttgacggggctctctgtcgagcacgacatcgag
accttccaggaagggcagacagtcatcctgacgcttaaggataaagccatcctggatgag
gaggacggagacgtgctggtgaacgtgaacatggtggacaaggagaaggctgacaagaac
gtggagctcaagaagaagaagccggtgtaccagccctacgaggaggacgagtctgtggat
gacctggccattatgcgccagcgggccgtactgtccaagtacgatgaggagatcgacggg
gagaagaggaagtcgttccagctggagcacggcgggacggcggacggcagctgggagcgc
gagctgcaaagcgtgcgtgacacgctgcgcagccaggcccagcggctcgagactgcggtg
ccccagatagccaacgagttctactcacccgaagagatggtcacgttccgaaagacgaag
cgccgggtgaagaagatccggcgcagagagaagacgttacgtgccgaccagctggcaccg
ctccccggcaagacctcgggggtggcggcctcggacctcggctcgcggcgtcgtcagggc
gctttgcctccatgctctgtagagggcgagggtgagcaggcggagggtgagagcgaggag
gttcgtggcgatggcaggggtggtgaggagcgacaggaggaggggcatgatgccgacaca
acggtgcaggacatgcaaatgagcgacgacgaggaggagctggtgacgcccgcgtcaccc
gtcgtggtggaggaggatgaggcggaacaggagctgcagaggcagctggacaagcagcgg
cggctccggcagaagagggacctgcgtgacgcggctatcagggtcgcgacggtggtgcgg
agcatgcagagcggggagcgacggggtgagaacgacggtggtgaggatgaggaggaggat
gacgaggaggggatggttctgggggagcgagaccggcatggccacatcgtcttcaactcc
acgtcggagttctgccgcacgctcggggaaatccccacctacggcctgtcggggaaccgc
gacgaccgcgacgacctgctggactttgagcagagcgactcggagatgcgagcagacgag
gaggatgaggagggggccggctggagcgcggtcaacctggaggaagaacgggagcgtgtg
gagaccccaacgggagccggtgcaatcctggaggaagagccgatgatcacgggtggtctc
gcgtccgctctcaagctctgcaacaccaaggggtacctggagacggagatagctaagatg
gcacgcgtcaaaaacccccacaagaccctcccctccgccctctacaccatcgaagacaag
aatcacggcagcgatgacaagtacagccgccgggaggagtaccgcgcctacgggcaggaa
ttcaaggacaaggagcactaccggccagacgtgcgcatcgagtacgtggacgagacgggg
cgcaagctcacacccaaggaggcgttccgacagctatctcaccgcttccatggcaagggc
tcgggaaggatgaaaactgagaaacggcaaaagaaactcgaagaggagcacatgctgagg
aagatgagttcgagtgacactccacttggcaccgttgccctactgcaggagaagcagaag
gcccagaagacgccattcatcatcttgagcggcagcggcaagagcatgaacgcgaacacg
ataacgaagtga
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