Petromyzon marinus (sea lamprey): 116953853
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Entry
116953853 CDS
T09614
Symbol
SRBD1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
pmrn
Petromyzon marinus (sea lamprey)
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
S1
HHH_9
HHH_7
Tex_central_region
YqgF
DNA_pol_B_palm
EME1-MUS81_C
HHH_6
S1_2
Motif
Other DBs
NCBI-GeneID:
116953853
NCBI-ProteinID:
XP_032830007
UniProt:
A0AAJ7U5E9
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Position
53:complement(462697..520674)
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AA seq
1094 aa
AA seq
DB search
MERLRPNRKAAIILHDEDDDQDDQESMSDHEEWTPSDNDTRPKKPGGAKRRLHADSGSDD
TETPAKRAKRPAAPRAPRVPKAPKEPKAPRAPRVPKAPRAPRVPKAPKEPKAPRAPRVPK
APKEPKAPKIPKATKAREKPETLSPRKPVAVKEEPPWSPGRGALAGIAIGVAGQALAIKP
DPHTSTNREPHSHSATGPHVKKEPHSDSATGPHVKKEPHSDSATGPHVKKEPHSDSATGP
HVKKEPHSHSATGPHVKKEPHSDSATGPHVKKEPVAVSWTVAQAVARQLALSEGVVQQVV
RLLDEEYTIPFIARYRRELTNDMDADMLRQVEESVHQLRAVQKKVKSAVATLQKDDQLTA
RLQQALQECRCVEELEILVAPLKTSSRQSKAERARRLGLEAAAQTVLTEPHRLDMVALVR
PAEPGLSTLAEVEAGVQHILADIIAKDRATMDMVRKMCENSMVMIESSLSAAAKTSLHKG
KEGARDGGLSARSFHGKAPHGKRQDINNFEKYFSFQKPISRVENYEVLALNRGENLKILT
VKINIPVQVKTNFHSWCLNQRWRLLVPFVPPYVQQLLSNSLEDSLKRLIIPLVTRHYRAS
LTRRAELASISLFAKNLRKLLLVPPVRGRSVLGIDPGFRHGCKLALTSPTGQVVATDVIF
LDDTKRSQATVRNLLLQHRCETVAIGNGCGCREAECFVSELIQSGSLRPLNVVYSIVNEN
GASIYSVSPEAQQEMPGMDPNLRSAVSIARRLQDPLAELVKIDPKHLGIGMYQHDLPDAQ
LKVALRGVVQECVSFVGVDINACSVTLLGYVSGLSSVLARRIVEWREQQGPFLCRQQLLR
VKGMGPKTFLQCAGFVRVNPAPSSTGPATSSSAGVGAGVGGSEPGANPAPAPGRKKRTRQ
GGGPEEGEEEEVANPLDRTWIHPESYAIAHRLLRLIGGSAEQVGRPELRRRVEAALAQHG
SVEALAQAVGTTVPTLQIVLDGLKQPHDHDIRAELQKPIFRRTVMTLEELHVGMSLQGRV
VSYTDFGAFVDIGVGQKALIPKRFITAQNSLPTGQGGADRRSSFLLGPGDRVEVRVHHME
LARNRITLALERML
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggagcgactgcggccaaacaggaaggcagcgatcatcctccacgacgaggatgacgat
caagacgatcaagagtcgatgtcggaccacgaggaatggacgccaagcgacaatgacacc
aggcccaagaagcccggcggcgccaagaggcggctccacgctgactcggggagcgacgac
accgagacccctgccaagagggccaaaagaccagcggcccccagggctcccagagtccct
aaggcccccaaggaacccaaggcccccagggctcccagagtccctaaggcccccagggct
cccagagtccctaaggcccccaaggaacccaaggcccccagggctcccagagtccctaag
gcccccaaggaacccaaggcccccaagatcccaaaggcaacgaaggcccgagagaagcct
gaaaccctttcgccaaggaagcccgtggcagtgaaggaggagccaccgtggtctcctggg
aggggggctctcgctgggatcgccatcggggtggcagggcaggctctggcgatcaaacca
gaccctcacaccagcacgaacagggagccacactcgcactctgccacggggccccacgtg
aaaaaggagccacactcggactctgccacgggaccccacgtgaagaaggagccacactca
gactctgccacggggccccacgtgaagaaggagccacactcagactctgccacgggaccc
cacgtgaagaaggagccacactcgcactctgccacgggaccccacgtgaagaaggaacca
cactcggactctgccacgggaccccacgtgaagaaggagccggtggctgtgagctggacg
gtcgctcaggcggtggcgaggcagttagcgctgtcggagggcgtggtgcagcaggtggtg
cggttgttggacgaggagtacacgatccccttcatcgcacgctaccgccgtgagttaacc
aacgacatggacgccgacatgctgaggcaggtggaggagagcgtccaccagctgcgggct
gtgcagaagaaggttaagagcgccgttgcgaccctccagaaggatgatcagctgactgct
cgcctgcagcaggcactgcaggaatgtcgctgtgtggaggagttagagatccttgtggcg
ccgttgaagacgagcagcaggcagagcaaggctgagcgggcgcggcgtctcggcctggag
gctgcggcgcagacggtgctcacggaaccgcacagactcgacatggtggcactggtgcga
cccgcagagccaggcttgtcgactctggccgaggtggaggccggcgtgcagcacatcctg
gccgacatcatcgccaaggacagggccaccatggacatggttcgcaaaatgtgcgagaat
tccatggtgatgatcgaatcgtcactctcggctgcggccaagacctcgctacacaagggc
aaggagggggccagggacgggggcctttctgcgcgtagcttccacgggaaggccccccac
ggcaaacgccaggacatcaacaattttgaaaaatacttcagcttccagaagcccatcagc
agggtggagaactatgaggtgttggcgctgaatcggggagagaatttgaaaatcctgacg
gtgaagatcaacatccccgtgcaagtcaagaccaacttccacagctggtgtctcaaccag
aggtggcgtctgctggtacccttcgtgccgccttatgtgcagcagctgctctccaactcc
ttggaggactccttgaagcgcctcattatcccgctggtcacacgccactaccgcgcgagt
ctcacgcgccgtgcggagctcgcctccatttccctcttcgccaagaacctgcgcaagctg
ctgctggtgccgccggtgcgcggtcgctccgtgctcggcatcgacccggggttccggcac
gggtgcaagctggcgctcacctcccccacgggccaggtggtggcaaccgacgtgatcttc
ttggacgacacaaaacgcagccaggccaccgtgaggaacctcctgctgcagcaccgctgt
gagaccgtggcgattggcaacggctgtggctgccgtgaggcggagtgcttcgtgtcggag
ctcatccagagcggctccctgcggcccctcaacgtggtctacagcatcgtgaacgagaac
ggcgcctccatctacagcgtgagccccgaggctcagcaagagatgcctggcatggacccc
aacctgcgcagcgccgtgtccatcgctcgccgtctgcaggaccctctggcagagctggtg
aagatcgaccccaagcacctgggcatcggcatgtaccagcacgacctgccggatgcacag
ctgaaggtggcgctgcgtggcgtggtgcaggagtgcgtcagcttcgtgggcgtggacatc
aatgcctgctccgtcacgctgctggggtacgtgtccgggctgagcagcgttctggctcgc
cgcatcgtggagtggcgtgagcagcaaggccccttcctctgccgccagcagctgctccgc
gttaagggcatggggcccaaaacgttcctgcagtgcgccggcttcgtgcgcgtcaacccc
gcgccctcctccacggggcccgccacctcgtcgtccgcaggcgtcggtgccggcgtcgga
ggctctgagccgggggctaatccggctccggctcccggccggaagaagcgcaccaggcag
ggagggggccccgaggagggggaggaggaggaagtcgccaaccccctggaccgcacgtgg
atccacccggagtcgtacgccatcgcccatcgcctcctgcgcctcatcgggggctccgcc
gagcaggtggggcggccggagctgcggcgccgcgtggaggcggcgctggcccagcatggc
tccgtggaggcgctggcgcaggcagtgggcaccacggtgcccacgctgcagattgtgctg
gacggactcaagcagcctcacgaccacgacatccgtgccgagctgcagaagccgatcttc
cggcgcacggtgatgacgctcgaggagctccacgtggggatgtcgctgcagggccgcgtc
gtcagctacaccgactttggtgccttcgtagatatcggcgtgggccagaaagccctcatt
cccaagaggttcatcactgcgcagaactcgctcccaacaggtcaggggggtgctgaccgc
cgcagtagcttcctgctgggccccggcgaccgcgtggaggtccgggtccaccacatggag
ctggcacgcaaccggatcaccctggcacttgagcgcatgctgtga
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