Petromyzon marinus (sea lamprey): 116953867
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Entry
116953867 CDS
T09614
Symbol
NUP62
Name
(RefSeq) nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116953867 (NUP62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116953867 (NUP62)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116953867 (NUP62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nup188_C
DUF4164
FERM_N_2
Motif
Other DBs
NCBI-GeneID:
116953867
NCBI-ProteinID:
XP_032830036
UniProt:
A0AAJ7U557
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All DBs
Position
53:1778241..1792010
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AA seq
599 aa
AA seq
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MSFVSGGTGNATGFSFGAQPGGAGGGFSFGGAGAPTAAAPGAQMPATGSAFSFAPATAAA
PAASSSGFSFGGAGAGTGANTGFSFGQSAMGAPSTAAAAPSVSAAAAPAAAPTAATGFQL
GGAPAGMAAPGGFAFGASGAATPASSAPTASFGFSGGATGAFSFSTPTTTTTQGLMLGGG
LTGASSLGGPGAGASAAKLPFSFGAATSTGLTLGGVSAPTSTMAQSTGQATAVSFGQKPL
GGAQGTGMGLSGGLSLGGTPLTSAAAGFAQGAPQLATAAPSAGFSLGLGLAKTETTTAPT
SLGGTTRGFSLAGAAAAVVAPSATSAASTATSSSSFGFGTAPASCTTAQQVAGAAGAGLA
SFAGFKPPAAATATSAAAIVSAAPAASSASVAPVSTTATSAAPSLSFGQLEELLNKWGSE
LEEQEKHFLHQATQVNAWDRTLIENGDMITSLHKDVEKVKLDQKRLDQELDFILSQQREL
EDLLVPLEDSVKEQTGTIYMQHADEERQHTYKLAENIDAQLKRMAQDLKEIIEHINTSSS
SHNSTDPLQQICKILNAHMDSLQWIDQNTVFLQKKVDEVAKQFETQRKEQEHPYRLGLN
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtctctggtggcacggggaacgccaccggcttctccttcggtgctcagccc
ggcggtgccggcggtgggttttccttcggcggcgccggtgccccaactgcggcggcgccg
ggggcgcaaatgccggccaccggctcagccttcagcttcgccccggccaccgcggccgcc
ccggcggcgtcgtcgtccgggttctcgtttggcggcgccggtgccgggacaggtgccaac
accggattctcgttcggtcagtcggccatgggcgccccttctaccgccgcagctgcccct
tcagtatctgccgcagctgcccccgccgctgcccccaccgccgccacggggttccagctt
ggaggagcaccggcggggatggccgcgccaggggggtttgcgtttggggcaagcggtgcg
gccaccccggccagcagcgccccgacggcgagcttcgggttcagcggtggagcgacgggc
gccttctcattcagtacgcccaccaccaccaccacgcaaggcctgatgctgggaggaggg
ctgacgggcgccagctctcttggggggccaggagcaggggcctccgccgccaagctgccg
ttcagctttggcgccgccacctcgactggcctgaccctgggaggggtctcggcacccacc
agcacgatggcccagtccaccggccaggccaccgccgtgtccttcggacagaagccccta
ggcggcgcacaaggtacgggcatgggtctgagtggcggactgagcctgggcgggaccccg
ctcacgtccgccgctgccgggtttgcgcagggagccccccaactagccacggctgccccc
tcggccggattctcgctcggcttgggcctggccaagaccgagacgaccaccgcaccgact
tcactcggcgggacgaccagaggattttccctggccggcgccgctgctgccgtcgtggcc
cccagcgccacctcagccgccagcaccgcaacgtcgtcctcctccttcggctttggcacg
gcgcccgcctcctgcacgaccgcacagcaagtggcgggcgcggcaggcgccgggctggcg
tccttcgccggatttaaaccgcccgctgccgccaccgccaccagcgccgccgccatcgtc
tcggccgccccggccgcaagctccgccagtgtggcgccggtcagcaccaccgccaccagt
gcggcaccctcgctatcgttcgggcaactggaggagctgctgaacaagtggggctcggaa
ctggaggaacaggagaagcatttcctgcaccaggcgacgcaggtcaacgcgtgggaccgc
acgctcatcgagaacggggacatgatcacgtctctgcacaaggatgtggagaaagtgaag
ctggatcagaagaggctggaccaagagctggacttcatcctgtcccagcagcgcgagctt
gaggatctgctggtgccacttgaggactcggtgaaggagcaaacggggacgatctacatg
cagcacgcggacgaggagcgccagcacacgtacaagttggccgagaacatcgacgcgcag
ctcaagaggatggcccaggacctcaaggagatcatcgagcacatcaacacctcgagcagc
tcgcacaactccaccgaccccctgcagcaaatctgcaagatcctgaacgcgcacatggac
tctctgcagtggattgaccagaacacagtctttctgcagaagaaggtggacgaggtggcc
aagcagtttgagacgcagaggaaggagcaggagcatccgtaccgcctgggcctcaactga
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