Petromyzon marinus (sea lamprey): 116953886
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Entry
116953886 CDS
T09614
Symbol
DCAF5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116953886 (DCAF5)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116953886 (DCAF5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116953886
NCBI-ProteinID:
XP_032830064
UniProt:
A0AAJ7U5E7
LinkDB
All DBs
Position
53:9714554..9730217
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AA seq
942 aa
AA seq
DB search
MLGAVRFVERRRRAGGEEAAALRRRLQASRLARARGLFHRELRGHFGCVNAVEFSCGAGS
WLVSGGDDRRVLLWDVERAVHGMGQPVPMTGEHHSNIFCLAFTSDNKRIFSAGNDEQVIL
HDAERGDTVDVFPHEEAVYGLSVSPDNDCVFASSSDEGRVLIWDTRISHHEEPFCLANYR
SPFHGVMFNPVESRLVATANSKEGVGLWDVRKPRSCLWSYGGDGGPASAMSVRFDASGGR
LVALRRRLPPVLFDVRHTRPLCHFQHPGYYNSCTMKSCCFAGDRDQYVLSGSDDFNLYMW
RIPDEPIQEAERTVPRAFLVLKGHRSIVNQVRFNNNTHMLCSSGVEKVIKVWSPFVQPGS
RGDLSGEAQEPRRAMYTHEEYIGLVLSSGSALSHDYGQQSLDEDPRMMAFFDSLVQREVD
GWSSASDSDASPGALAWVPRGAAAERSPLTGVLVPLDEWERQPRDPRPLHPPRIPRGAVP
SAAAPRGTTTSTGSNDGGAGGTDNNNAGSGNGRGGTRRRWRRRRAADVSPDTSDDDGGGG
GGGERRTPDADQNDDDDGRKNGGGDGARDSGESGESGEDRRASTRRRNAARTRARKQRSR
RHPPDGGAAAAAAAASLSSESGGAGGGAGPAASSSSSSDTSARFGDGAAEARKVFRVYNK
ICNSYRRHLRKGRQQQPQPQQQQQEEEEERRAVAGDAEEDGTGEWILIRGPYHDDVDDDV
DDDVGSNRPARQTPTCSWLTDEEEEEEAGGSAASGKRRATDKTSSSASTMSSSSSGFDEA
RGTTSRRRRLTNGKAAAPASSSSPSSSSSSAAAVASSSQASSSSSSPTSSRASSSLSRSS
SSGDGRRRGRHCRRVTESDEEEEEEEETKRNGDFGARDGSGGGGGGGGDVVHSASARASK
RRHEEEDEEETDAGEEVVEEVGNEKEAASPEPGGKRKQKRQR
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcgccgttcgcttcgtggagcggcgccgcagggcgggcggcgaggaggcggcg
gcgctgcgtcgccgcctgcaggcgtcgcgcctcgccagggctcgcggcctcttccaccgc
gagctgcgcggacacttcggctgcgtcaacgccgtcgagttctcgtgcggggccgggtcg
tggctcgtgtcaggtggagatgaccggcgcgtgctgctctgggatgtggagcgagcggtg
cacggcatgggccagcccgtgcccatgaccggggaacaccactcaaatatcttctgcctg
gccttcacctctgacaacaaacgcatcttctcagccggcaatgacgaacaggtcatcctc
cacgacgccgagaggggcgacacggtggacgtgtttccgcacgaggaggccgtctatggc
ctctcggtgagccccgacaatgactgcgtcttcgccagctcctccgacgagggccgcgtg
ctcatctgggacacgcggatctcccaccacgaggagccgttctgcctggcgaactaccgc
tcgccgttccacggggtgatgttcaaccccgtggagtcgcgcctcgtcgccactgccaac
tccaaggagggcgtggggctgtgggacgtgcgcaagcctcgcagctgcctgtggagctac
ggtggcgacggcggccccgccagcgccatgagcgttcgcttcgacgccagcggcggccgc
ctggtggcgctgcggcgccgcctgccgcccgtgctgttcgacgtgcgccacacgcggccc
ctgtgccacttccagcaccccggctactacaactcgtgcaccatgaagagctgctgcttc
gcaggcgaccgcgaccagtacgtgttgtcggggtcggatgacttcaacctctacatgtgg
cggatccccgacgagcccattcaagaggccgagcggacggtgccgcgagccttcttggtg
ctgaagggccaccgctcgatcgtcaaccaggtccgcttcaacaacaacacccacatgctg
tgctcctccggggtcgagaaggtcatcaaggtttggtccccgttcgtgcagcccggttcc
cgcggcgacctgtctggcgaggcgcaggagccgcgccgggccatgtacacgcacgaggag
tacatcggcctggtgctgtcgagcggctcggcgctgtcgcacgactacgggcagcagtcg
ctggacgaggacccgcgcatgatggccttcttcgactcgctggtgcagcgcgaagtggac
ggctggagctcggcgtccgacagcgacgccagccccggcgcgctagcgtgggtgccccgc
ggcgccgcggccgagcggagccccctgacgggggtgctggtgccgctggacgagtgggag
cgccagcctcgcgatccgcgccccctgcatcctccccgcatccctcgcggcgcggttccc
tcggccgccgcccctcgcggaaccaccaccagcaccggcagcaacgacggcggcgccggc
ggcaccgacaacaacaacgccggcagcggcaacgggagaggcggcacgcggcggcggtgg
cggcggcgccgcgccgcggacgtttcgccggacacgtcggacgacgacggcggcggcggc
ggcggcggggagcgccgaacgcccgacgccgaccaaaacgacgacgacgacggaaggaaa
aacggaggcggcgacggagcgagagacagcggagagagcggagagagcggcgaggaccgg
cgagccagcacgcgccggcgcaacgcggcgcgcacgcgcgcccgcaagcagaggagccgc
cggcacccgccggacgggggggcggccgccgcggccgccgccgcctcgttatcgtccgag
agcggcggcgccggcggcggcgcggggccggcggcgtcgtcgtcgtcgtcgtcggacacg
agcgcccgctttggtgacggcgccgcggaagcccgcaaggtgttccgcgtctacaacaag
atctgcaacagctacaggaggcacctgcgcaaggggcggcagcagcagccgcagccgcag
cagcagcagcaggaggaggaggaggagcggcgtgcggttgcgggtgacgcggaggaggac
ggcaccggagaatggattttgatcagaggcccgtaccacgacgacgttgacgacgacgtt
gacgacgacgttgggtccaacaggccagcccgacagacgcccacgtgcagctggctcacg
gacgaggaggaggaggaggaggccggcggcagcgccgcgagcgggaaaaggcgagcgacg
gataaaacctcgtcgtcggcgtcgacgatgtcgtcctcgtcgtccggtttcgacgaggcg
aggggcaccacgtccagacgtcgccgactgacgaacggcaaagcggcggcgccggcctcg
tcgtcgtcgccctcctcgtcgtcctcgtcggcggcggcggtggcgtcgtcgtcgcaggcc
tcgtcgtcctcgtcgtccccgacatcgtcgcgggcgtcgtcctcgttgtcgcgctcttca
tcatccggggacgggcgccgccgcggccgccattgccgccgggtgacggagagcgacgag
gaggaggaggaggaggaggagacgaagaggaacggcgactttggtgctcgcgacggctcc
ggaggcggcggcggcggcggcggcgacgtcgtacattccgcgtccgctcgggcgtctaaa
cgacggcacgaggaggaggatgaggaggagacggacgcgggcgaggaggtggttgaggag
gtgggcaatgagaaggaggcagcatcgcccgagccgggcggaaagaggaagcaaaagagg
cagcgctga
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