Petromyzon marinus (sea lamprey): 116953952
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Entry
116953952 CDS
T09614
Symbol
RPS27A
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03010
Ribosome
pmrn04120
Ubiquitin mediated proteolysis
pmrn04137
Mitophagy - animal
pmrn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
116953952 (RPS27A)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116953952 (RPS27A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116953952 (RPS27A)
04137 Mitophagy - animal
116953952 (RPS27A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pmrn03011
]
116953952 (RPS27A)
04121 Ubiquitin system [BR:
pmrn04121
]
116953952 (RPS27A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116953952 (RPS27A)
Ribosome [BR:
pmrn03011
]
Ribosomal proteins
Eukaryotes
Small subunit
116953952 (RPS27A)
Archaea
116953952 (RPS27A)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
116953952 (RPS27A)
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116953952 (RPS27A)
Exosomal proteins of colorectal cancer cells
116953952 (RPS27A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Fer2_3
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
116953952
NCBI-ProteinID:
XP_032830180
UniProt:
A0AAJ7XDC5
LinkDB
All DBs
Position
53:1523837..1530127
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AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKITRLRRE
CPSEECGAGVFMANHFNRQYCGKCCLTYVFNKPEEK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaagacgctcacgggcaaaaccatcaccctcgaggttgaaccctcg
gacactatcgagaatgtgaaggcaaagattcaagacaaggaggggatccctccagaccag
cagaggctgatctttgcaggcaagcagcttgaggatggccgcacgctgtccgactacaac
attcagaaggagtcgacgctgcacctggtgctcaggctgcgcggaggcgccaagaagcgc
aagaagaagtcgtacacgacccccaagaagaacaagcacaagcgcaagaaggtcaagctc
gccgtgctcaagtactacaaggtggacgagaacggcaagatcacgcgtctgcggcgcgag
tgcccctcggaggagtgtggagccggcgtcttcatggccaaccacttcaaccggcagtac
tgcggcaagtgctgcctcacctacgtgttcaacaagcccgaggagaagtga
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integrated database retrieval system
