Petromyzon marinus (sea lamprey): 116953972 Help Entry 116953972         CDS       T09614                                  Symbol SYMPK Name (RefSeq) symplekin   KO K06100   symplekin Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn03015   mRNA surveillance pathway pmrn04530   Tight junction Brite KEGG Orthology (KO) [BR:pmrn00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     116953972 (SYMPK)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     116953972 (SYMPK)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pmrn03021]     116953972 (SYMPK)    03019 Messenger RNA biogenesis [BR:pmrn03019]     116953972 (SYMPK) Transcription machinery [BR:pmrn03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      116953972 (SYMPK) Messenger RNA biogenesis [BR:pmrn03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      116953972 (SYMPK)     U7-dependent histone pre-mRNA processing factors      116953972 (SYMPK) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N V-ATPase_H_C DUF3915 Motif Other DBs NCBI-GeneID:  116953972 NCBI-ProteinID:  XP_032830206 UniProt:  A0AAJ7U7R6 LinkDB All DBs Position 53:complement(6682229..6709804) Genome browser AA seq 1345 aa AA seqDB search MTAAQRFGMASELRLEAGEEAGSNTDSRPTSDRVVDLINQASLTTNESQKLLLLKQVQEL IVNKEPALLDNFLDEMIAFQNDRLLEIRKFIIGFMEEACKKDNELLLKLIANINMLLHDE NVNVVKRAILSLTQLYRVMLQWLAGHRKVSEEQEAVWEMMSAMRNDIMQLLDSENDGVRT HAIKFVEMLVVAMSPRTQDSEVTKRQEGEACMERIPRDHPLLKQSQLREMGEAALERLLS FMVHPAISSINLTAALGSLATIARQRPVFMARVVQAYETLHANLPPTLAKSQVSSVRKNL KLHLLGLLKLPSSIEFHPQMSTLLYDLGTSPQELQRNMPSARELRRRMHRDDTEQHSKKM KMETMQDEDDDKEAEAVPAPRPKAAPLPSVLSAIDVTAQHILPMLTPDKVANLVLVSMVL LPDTMPASFQATYTPIESAGTHAQIQHLARLMATQISNAGLGPGVEMEKEREKEREREKE REKEREKKANEEEENTKNSLIKRKVQVISVMATAYSGAGGAMTATDEGATPTPRRLPEPI IPAPQTRLAGPGIRRKVFRVADVLQPLSSEEMERMSHAAVGRILQADRTCMRGGAGHVRN QLLARLAARFGGEMRAQLLECVLADMRTQGDLAFTWLFQEYATYLESEQPSALENYDNCL TGLLSGLLEKGDQRDGLFSRIVLEAPRMTGRALEVLRRYCEDETRVYLGMSTLRELVLKR PSQKMLYMHVLLELCSHDKDKVRSQALMFVKRLYEKEELRNCIETFALNMLQCLVHPNPP SVCFADDRDTEVASSWTDDSIRQCLYVYLSLLPLNHTLIHELAAVYTEAIADIKRTILRI IEQPIRGMGMNSPELLLLVESCPKGAETLVTRSLHILTEKAPPSPELVKRVRDLYQKRVS DVRFLIPVLNGLEKKEVIAALPKLIKLNPIVVKEVFNRLLGTQHGEGGVAMSPLTPGELL VALHNIDTTKCDMKSIIKATSLCFAERWVYSSEVLAVVMQQLMEQNPLPVLLMRTVIQSL SMYPRMGAFVMNILQRLIIKQVWKYPKVWEGFIKCCQRTKPQSFGVLLQLPPTQLAVVFD KCPEIREPLLMHVRSLTLQQQNHISKSTIAVLEMGPTIKIEQESEHILPAQREARRAMDT HGIRDDGSLPCWATPHRPDLHPRVNVNMHPAQHAPQHAQQHAQQHAHPHPHLQHLQPMQP MQHVKLAQLAQMQPGHAPIPGGRAEPPLRPAVHLEPRPESAAGAQSQPEPEHSRANSAVT VASAPASEAKPSAVLERAEGADTLATAGAGGRSMGKEDKAKADVEGDSAGLRPEEVKPAA REGAAEVHAAQGSGVPFARVMPAGP NT seq 4038 nt NT seq  +upstreamnt  +downstreamnt atgacggcggcgcagcggttcggcatggcctcggagctgcgcttggaggcgggcgaggag gcgggcagcaacacggacagcaggcccacgtctgaccgggtcgtggacttgatcaaccag gcttcactcacaacaaatgaatctcaaaagttgctcctgctgaaacaggttcaggaactg attgtcaacaaggaaccagccctcctggataacttcctcgatgaaatgatcgcgtttcaa aatgacagactattggaaattcgtaaatttatcattggcttcatggaagaggcatgtaag aaggacaacgagctgcttctgaagctgatcgcgaacatcaacatgctgctgcacgacgag aacgtgaacgtggtgaagcgcgctatcctcagcctcacgcagttgtatcgcgtcatgctg cagtggctggcgggccaccgcaaggtatccgaggagcaggaggcggtgtgggagatgatg agtgcgatgcgcaacgacatcatgcagctactcgactctgagaacgacggagtgcgcact cacgccatcaagttcgtcgagatgctcgtggtggccatgtcaccgcgcacgcaggactcg gaggtcaccaagcggcaggagggagaggcctgcatggagcgcatcccgcgcgaccacccc ctgctcaagcagagtcagctgcgagaaatgggcgaggcggcgctggagcggcttctcagc ttcatggtgcacccggccatctcctccatcaacctgacggctgcactgggctccctggcc acaatcgcgcgccagcgtcccgtcttcatggcccgcgtggtacaggcctacgagacgctg cacgccaatttgccaccgacgcttgccaagtcacaggtgagcagcgtgcggaagaacctc aagctgcacctgctggggctgcttaaacttccatcgtccatcgagttccacccgcagatg agcaccctcctctatgacctgggcaccagcccacaggagctgcagcgcaacatgccgagc gcgcgcgaactgcgaaggcgcatgcaccgcgacgacacggagcagcacagcaagaagatg aagatggagaccatgcaagacgaagacgacgacaaggaagcggaggctgtgccggcgcca agacccaaggcggccccgttacccagcgtactgtctgccatcgacgtcacggcgcagcac atcctgcccatgctcaccccggacaaagtggccaacctggtgctggtgagcatggtgctc cttccggacacgatgccagcctccttccaggccacctacacgcccatcgagtcggctggc acgcatgcccagatccagcacttggctcgtctcatggccacgcagatctccaatgccggg cttggaccaggcgtggagatggagaaggagagggagaaggagcgtgagcgagagaaggag agggagaaggagcgagagaagaaggcgaacgaggaggaggagaacaccaagaactcgctc atcaagcgcaaggtgcaggtcatctccgtcatggccaccgcctactctggtgccggtgga gccatgaccgcgacggatgagggggcgactccgaccccgcgccgcttgcccgagcccatc atccccgcaccgcagacacggcttgctggcccaggcatacgcaggaaggtattccgcgtg gctgacgtgctgcaaccgctgtcaagcgaggagatggagcgcatgtcgcacgccgctgtg ggccgcatcctccaggcggacaggacgtgcatgcgcggtggcgccggccacgtgcgcaat cagctgctggcgcggctggcggcccggttcggcggggagatgcgggcccagctgctggag tgcgtgctggctgacatgcgcacccagggggacctggccttcacgtggctcttccaggag tacgccacctacctggaaagcgagcagccctcggcgctcgagaactacgacaactgtctc acgggcctgctcagcggcctgctggagaagggcgaccagcgggacgggctgttctccagg atcgttctggaggccccacggatgacaggacgtgcgctcgaggtgttgaggaggtactgc gaggatgagacccgcgtgtacctgggcatgtcgacgctgcgggagctggtgctgaagcgg ccatcgcagaagatgctctacatgcacgtgctgcttgagctgtgctcccacgacaaggac aaggtgcgctcccaggcgctgatgttcgtgaagcgtctctacgagaaggaggagctgcgc aactgcatcgagacgttcgcgctcaacatgctgcagtgtctggtgcaccccaacccgccc tccgtgtgctttgccgacgaccgcgacaccgaggtggcttcatcatggacggatgactca atccggcagtgcctctatgtgtacctgtcgctgctgccgctcaaccacacactcatccat gagctggccgccgtctacacagaagccatcgcagacatcaagcgcaccattctgcgcatc attgagcagcccatccgtgggatgggcatgaactcaccggagttgctgctgctggtggag agctgtcccaagggtgccgagacgctggtcacgcgcagcctgcatatccttaccgagaaa gctccaccgtccccggagctggtgaagcgcgtgcgggacctctaccaaaagcgcgtgtcg gacgttcgcttcctcatcccggtgctcaacggccttgagaagaaagaggtgatcgcagca ctgcccaagcttatcaagctgaaccccattgtcgtgaaggaggtgttcaaccggttgctc ggcacccagcacggcgagggtggagtggccatgtcgcctctcacaccgggagagttgctc gtggcgctgcacaacattgacaccaccaaatgcgacatgaagtcaatcatcaaagccacc agcctgtgctttgcggagcgctgggtctacagctcggaggtgctggcagtggtcatgcag cagctgatggagcagaaccctctgccagtgttgctcatgcgcaccgtcatccagtcgctg tccatgtacccacgcatgggcgccttcgtcatgaacatcctgcagaggctcatcatcaag caggtgtggaagtaccccaaggtgtgggagggcttcattaagtgctgccagcgaaccaag ccgcagtcgtttggcgtgctgctgcagctgccgcccacgcagctcgccgtcgtcttcgac aagtgtcccgagatacgagagccgctgctcatgcacgtgcgctcgctcaccctgcagcag caaaaccacatttccaagtcgacgatagccgtcctagagatggggcccacaatcaagatc gagcaggaatccgagcacatcctaccagcccagagggaggcgcgccgcgcgatggacact cacggcatccgtgacgacggctccctgccgtgctgggccaccccgcaccggccagaccta cacccgcgagtcaacgtgaacatgcaccccgcgcaacatgccccgcagcacgcccagcag cacgcccagcagcacgcccacccgcacccccacctccagcacttgcagcccatgcagccc atgcagcacgtgaagctggcgcagctggctcaaatgcagcccggtcacgcgccaatccct ggaggacgcgcggaaccgccgctcaggccggccgtgcacctcgagccacgccccgagagc gccgcgggcgcacagagccagccggagcctgagcactcgcgagccaacagcgcggtcaca gtcgcctctgctcccgcctccgaagctaagccgtcggcggtgctggaaagggcagaggga gccgacacgttggcgacggccggcgcgggtgggcggtcgatgggcaaggaggacaaagcg aaggcggatgtagagggggacagcgcgggtttgcgcccggaggaggtgaagccggcggca cgggaaggtgcggccgaggtgcacgcagcgcagggaagcggtgtgccattcgcgcgtgtg atgccggcgggaccctag

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