Petromyzon marinus (sea lamprey): 116954032
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Entry
116954032 CDS
T09614
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116954032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116954032
Spliceosome [BR:
pmrn03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
116954032
Complex B
116954032
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
Motif
Other DBs
NCBI-GeneID:
116954032
NCBI-ProteinID:
XP_032830314
UniProt:
A0AAJ7XD41
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All DBs
Position
53:complement(283880..294521)
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AA seq
263 aa
AA seq
DB search
MDIRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIS
SATNALRSMQGFPFYDKPMRIQYSKVDSDIIAKMKGTFVEREKKKDRKKSKAKEDAAAAA
KKPAIAPAAPMAMAPMVVQQPPPMLGMPPGMPGAPPPYMPPPGMMAPGMVPPPAGAMPPM
QLAENPPNHILFLTSLPEETSEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDAQAGA
ARDALQGFKITPTNAMKISFAKK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagacccaaccacacgatctacatcaacaacctcaacgagaagatcaagaaa
gatgagctcaagaagtctctgtacgccatcttctcgcagtttgggcagatcctggacatt
gtggcactcaagacgctaaagatgcggggccaggcctttgtgatcttcaaggagatcagc
agcgcaaccaacgccctacgctcaatgcagggcttccccttctatgacaagcccatgcgg
atccagtactcgaaggtggactcggacatcatcgccaagatgaagggcaccttcgtggag
cgtgagaaaaagaaggatcgcaagaagagcaaggccaaggaggatgcggcggcggctgcc
aagaaaccggccatcgctcccgccgctcccatggccatggcccccatggtggtccagcag
ccgccccccatgctgggcatgccccccgggatgcccggagcccccccgccctacatgccc
cccccggggatgatggcgccgggcatggtcccccctccagcaggggctatgccccccatg
cagctggctgagaatccaccaaaccacatcctgttcctgacgagtctacccgaggagacg
agcgagatgatgctctccatgctcttcaaccagttcccaggcttcaaggaggtgcgtctg
gttccggggcggcacgacatcgccttcgtggagtttgaaaacgacgcgcaagccggagcg
gcgcgtgacgcgctgcagggattcaagatcacgccgaccaacgcaatgaagatctcgttc
gccaagaagtag
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