Petromyzon marinus (sea lamprey): 116954178
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Entry
116954178 CDS
T09614
Name
(RefSeq) Wilms tumor protein 1-interacting protein homolog
KO
K16682
LIM domain-containing protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116954178
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116954178
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116954178
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
116954178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
TFIIA
zf_RING_Vps8
PAP1
Motif
Other DBs
NCBI-GeneID:
116954178
NCBI-ProteinID:
XP_032830559
UniProt:
A0AAJ7U6C6
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All DBs
Position
54:complement(5412413..5488554)
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AA seq
661 aa
AA seq
DB search
MGSCEKDFASTAAEGPLRLRRSGPGAQDVRGDARLGGSRGVVLHGGGPPAGPPREFEAGP
GYPAGHGDVAAVLAGLRIYGDGGHGRYSQESKRASLGASYDTSTRIGGGNGMAMPGGPSS
LQDPRLAGSPRSSLGLQPSDHPHGLPSPRGSYTGPFDKYASPRSSLVLAPGSLYASQRDD
AAGAAPGSARSSLGYGGELPASPRASLIGHSAEAAGGAAAAVAAAAAAAAAAVTVGGSNR
TSGISMGYDDRCPAMSPRSSTGSQYSHAVSPRESYTNYTGDFDAFRVPHGLHAGAGHVGL
QQLQQQQQQHQQQYQQQYQQQQHQQQQYQHPFHAVVSPRSSLSSHSSRSSRGSGAGYPEL
QLPSPRSSLGHEEAVPVPVETAQMLACTPFSQQKAYAAHPLTMSGMGEQVGRPPHRGTPG
LLEAPGGGDATAAERKLEALTRQIELEMEAQTKAEYFGMCVKCNKGVYGSSQACQAMGNL
YHTSCFTCSSCGRTLRGKAFYNVTGKIYCEEDYLYSGFQQSAEKCYGCGHLIMEMILQAL
GRSYHPGCFRCVVCNKCLDGVPFTVDVENKIYCVRDYHKMFAPRCNACGQPILPAQDTEE
TIRVVSMDNDYHVECYHCEDCSLQLSDEEGHRCYPLDGRLLCHGCHLKRLRGQTELRATI
H
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctgcgagaaggacttcgcctccacggcggccgaggggccactgcggctgcgg
cggtcgggccccggggcccaggacgtgcggggggacgcgaggctgggggggtcccggggg
gtcgtcctgcacggggggggcccccccgccgggccgcctcgagagttcgaggccgggccc
gggtaccccgcggggcacggggacgtcgcggccgtgctcgctgggctccgcatctacggc
gacggcgggcacggcaggtattcccaggagagcaagcgcgccagcctgggcgcctcctac
gacacctccacgcgcattggcggcggcaacggaatggcgatgccgggcggcccctcgtca
ctccaggaccctcggctcgccggcagccctcgctccagcctgggcctgcagccgtccgat
catcctcacggcctgcctagcccgcgcggctcctacacgggcccgttcgacaagtacgcc
agcccgcggtccagcctcgtgctggcgccgggctctctgtacgcgagccagcgcgacgac
gcggccggcgcggcccccggcagcgcccgctctagcctgggctacggcggcgagctgccg
gccagcccgcgcgccagcctcatcggtcactccgcggaagcggcgggcggtgcggccgcc
gctgttgccgcggccgcggcggccgcggccgctgcggtgacggtcggcggcagcaaccgc
acgagcgggatcagcatgggctatgacgaccgttgccccgcgatgagcccgcggtccagc
acgggcagccagtactcgcacgccgtcagcccgcgcgagagctacaccaattacacgggc
gacttcgacgccttccgcgtgccgcacggcctccacgcgggcgccggacacgtggggctg
cagcagctgcagcagcagcagcagcagcaccagcagcagtaccaacagcagtaccagcag
cagcagcaccagcagcagcagtaccagcacccgttccacgccgtggtcagcccgcgctca
agtctgtcgagccacagctcgcgcagttcccggggttctggcgccggctaccccgagctg
cagctgccgtcaccgcgctcctcgctgggccacgaggaggcggtgcccgttcccgtggag
acggcgcagatgctggcgtgcacgccgttcagccagcagaaggcctacgccgcccacccg
ctcacgatgtcaggaatgggcgagcaggtggggcggcctccccaccgcggcacgcccggc
ctcctggaggcgccgggcggcggggacgcgacggccgccgagcgcaagctggaggccctg
acgcggcagatcgagttggagatggaggcgcagacgaaggccgagtactttggcatgtgc
gtcaagtgcaacaagggggtgtacggctccagccaggcgtgccaagccatgggcaacctc
taccacacgtcatgcttcacgtgcagctcctgcggtcggacactccggggaaaggccttc
tacaacgtgactggaaaaatatactgcgaggaagactatctgtattcgggcttccagcag
agcgcggaaaagtgctacggctgcggacacctcatcatggagatgatcctgcaggcgctg
gggcggtcgtaccacccgggctgcttccgctgcgtggtctgcaacaagtgcctggacggc
gttcccttcaccgtggacgtggagaacaagatctactgcgtgcgcgactaccacaagatg
tttgctccgaggtgcaacgcctgtggccagcccatcctgccagcccaggacactgaagaa
accattcgagtcgtgtccatggacaacgattaccacgtggagtgctaccactgtgaagac
tgcagcctgcagctgagcgacgaggaggggcaccgctgctacccgttggacgggcggctg
ctgtgccacggctgccacctgaagcgcctgcgtgggcagacggagctccgtgccaccatc
cactga
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