Petromyzon marinus (sea lamprey): 116954200
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Entry
116954200 CDS
T09614
Name
(RefSeq) cadherin-2-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116954200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116954200
Cell adhesion molecules [BR:
pmrn04515
]
Cadherins
Major cadherins
116954200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
TMEM154
Stevor
Cadherin_4
Cytomega_TRL10
DUF6249
DUF4746
DUF3377
Motif
Other DBs
NCBI-GeneID:
116954200
NCBI-ProteinID:
XP_032830616
UniProt:
A0AAJ7XDP0
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Position
54:complement(4160837..4200548)
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AA seq
941 aa
AA seq
DB search
MRGLYPRMLLLPLLLLGAVTAEEQSRESQDEDEEGACVPGFSRRTNLRPGTHTLRPGQLV
LKVPFESCGEAVELSANDRRFTLEADGSLRAARTLRLSRRPLHLTVRARAVGSGRTWESP
VKLVPGKAKRRSKNKGKHGGTPKQEMEEMEREEEEHEEAGVGAAGEEEAAHGDDGSVLMF
HQLRRGKQHRQKRGWVIPAINVPENDRGPFPKQLVQIKSDTHGEIRYSIVGPGADQNPMG
VFIVDPVTGRLSVAKTLDRELIAEYLLKGHAVDMNGRPVESPVDLVINVIDMNDNRPEFA
TPVFQGSVAEGSPPGTPVMTVTASDKDDALSANGMIRYKIMSQVPKMPFDHMFTINNATG
VISTIAAGLDRERTPQYMLVVQASDMEGDPNIGLTNTATAIVTITDKNDNAPEFTGRTFS
GTARENAVNVTVTTLTVTDMDEPGTPAWRTRYVIRGGDPGKNFAVETDPRTNDGRLYVVK
PLDFENSSKYNLVIAAENEVSLESAQFGPASTATVTVTVEDENEGPVFEPLRREVKLAEG
LPVGQHVTNMVARDPDIAQRQTVRYKKLSVPGDWLDIDPVSGKVTTAVVLDREAALVQAN
TYTATFLATDDGSPVASGTGTLVLLLSDVNDNAPIVWPDEATVCDVRGGTVNVTARDADE
DFNGSPFSFQLPPGNPDPNNNWTIHRVDGSSSQLRMKVALPEGLYFVPLLISDSGNPAMS
AVSELEVKVCACDQHGDCVNRAAIAAAGLGTGAIVAILLCLLLLLILVLLFVVYKRRRDK
DRVAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDPSQLQHMSELLPLEAPYGKGPGVRR
LDERPSVAEPCYPSRSGAPHPSDIGDFINEGLRTADNDATAPPYDSLLVFDYEGAGSVAG
SLSSLNSSSTGGGGDHDYDYLNSWGPRFRKLADMYGGGYDD
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagggggctgtaccccaggatgctgctgctacccctgctgctgctgggcgcggtgaca
gcggaggaacaaagccgcgagtctcaggatgaggatgaagagggcgcatgtgtgcccggg
ttctcccggcgcacaaacctccgtccgggcacccacaccctgcggcccggccagctggtg
ctcaaagtgccatttgagagctgcggcgaggccgtggagctgagcgccaacgaccggcgc
ttcacgctggaggccgatggcagcctgcgtgccgcacggaccctgcgcctgtcccgccgg
cccctgcacctgacggtgagggcccgtgccgtcggcagcggccgcacctgggagagccct
gtcaagctggtgccgggcaaggccaagcgccgttccaagaacaagggaaagcacgggggg
acgcccaagcaggagatggaggagatggagcgcgaggaggaggagcacgaggaggcgggc
gtcggcgctgcgggggaagaggaggcggcgcacggagacgacggcagcgtgctcatgttc
caccagctgcggcgcggcaagcagcaccggcagaagcgtggctgggtcatcccggcgatc
aacgtccccgagaacgaccgcgggcccttccccaagcagctggtgcagatcaagtcggac
acgcacggggaaatccgctacagcattgtggggcccggcgccgaccagaaccccatgggg
gtgttcatcgtggaccccgtgaccgggcgcctctcggtcgccaagaccctggaccgtgag
ctcatcgcagagtatctgctcaagggccacgcggtggacatgaacgggcgtccggtggag
agccccgtggacctcgtcatcaacgtcatcgacatgaacgacaaccggcccgagttcgcc
acgcccgttttccagggctccgtggctgagggctccccaccaggcacgccggtgatgacg
gtcacggcgagcgacaaggacgacgccttatcggccaacggcatgattcgctacaagatc
atgtcgcaggttcccaagatgcccttcgaccacatgttcaccatcaacaacgccacgggc
gtcatcagcaccattgccgccgggctggaccgcgagaggacgccgcagtacatgctggtg
gtgcaggcctcggacatggagggtgacccgaacatcggcctcacgaacacggccaccgcc
atcgtcaccatcaccgacaagaacgacaatgcccccgagtttacgggcagaaccttcagc
ggcacggcgcgcgagaacgcggtgaacgtgacggtgacgacgctgacggtgacggacatg
gacgagcccggcacgccggcgtggcgcacccgctacgtcatccgtggcggggaccccggc
aagaacttcgccgtggagaccgacccccgcaccaacgacggcaggctctacgtcgtcaag
cccctggactttgagaactcgtcgaaatacaacctcgtcatcgctgcggagaacgaggtg
tcgctcgagagcgctcagttcggaccggcaagcactgcgaccgtcaccgtgacggtggaa
gacgagaacgaggggccggtgttcgagccgctgcggcgcgaggtgaagctcgccgagggc
ctccccgtgggccagcacgtgaccaacatggtggcgcgtgaccccgacatcgcgcagagg
cagaccgtgcgctacaagaagctttctgtgccgggcgactggctggacatcgaccccgtg
agcggcaaggtgaccacggccgtggtgctggaccgcgaggcggccctggtgcaggccaac
acctacacggccaccttcctggccacggatgacggcagccccgtggcgagcggcacgggg
acgctggtgctgctgctgtcggacgtcaacgacaacgcccccattgtgtggcccgacgag
gccacggtgtgcgacgtgcggggcggcaccgtcaacgtcaccgccagggacgccgacgag
gacttcaacggcagtcccttcagcttccagctgccgcccggcaaccccgaccccaacaac
aactggaccatccaccgggtcgacggcagcagctctcagctgcgcatgaaggtggcgctg
ccggagggcctgtactttgtgccgctgctcatctcggactcgggcaacccggcgatgagc
gccgtgtcggagctcgaggtgaaggtgtgcgcctgcgatcagcacggcgactgcgtcaac
cgcgccgccatcgccgccgcgggactcggcaccggcgccattgtggccatcctcctctgc
ctgctgctgcttctcatcctggtgctgctcttcgtcgtgtacaagaggcgccgcgacaag
gaccgcgtcgccaagcagctgctcatcgaccccgaggacgacgtgcgcgacaacatcctc
aagtacgacgaggagggcgggggagaggaggaccaggactacgacccgtcgcagctgcag
cacatgagcgagctgctgccgctggaggcgccgtacggcaagggccccggcgtgcgccgt
ctggacgagcggccgtcggtggccgagccgtgctacccgtcgcgctcgggggcgccgcac
cccagcgacatcggcgacttcatcaacgagggcctgcgcacggccgacaacgacgcgacg
gcaccgccctacgactcgctgctcgtgttcgactacgagggcgccggctcggtggccggc
tcgctcagctcgctcaactcgtcgagcacggggggcggcggcgaccacgactacgactat
ctcaactcgtgggggccgcgcttccgcaagctcgccgacatgtacggcggcggctatgac
gactga
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