Petromyzon marinus (sea lamprey): 116954215
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Entry
116954215 CDS
T09614
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116954215 (SNTB1)
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Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116954215
NCBI-ProteinID:
XP_032830647
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All DBs
Position
54:complement(2007375..2053728)
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AA seq
550 aa
AA seq
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MASTGRVRGAQRSGLLEVLVRDGGWCRVLATLGEDSLTLSAEEAATNNSSGGGGVGLGAG
VESSFNGLNGPPAPSSTSPQQGRGPAAEDEGPEEAVPESIANIKRVVRVLKQEVGGLGIS
IKGGKENKMPVLISKIFKGLAAEQTGGLYVGDAILSVNGADLRDATHDEAVQALKRAGRE
VVLEVKYLREVTPYFKKGSPIGELGWEVAPPLTPKPSLAVAAAAGNAAGGSPDAGVHDAA
KDKKRIPLKMCFVTRNLSKPDPENRLIELHSPDSAHTIVLRCRDSAGAHAWFGSLHANAA
ALTQAAVREANQLLQAAGGGGGGGNWGPVQHMGWLAQQVTAEGHSQWKAVLMVLTDRDLA
LHQTMPWTREAWAAPLVSHPLLATRLVHSGALHGSPPPPHTELTFATRTGSRHGVETRVF
RAETNRELAAWTRLVVQGCHTAAELIKEVSVACKLRDADCTLSIHFEEGFCLSRDGGGGS
VGGAAAPTPILRYPFERLRMSSDDGDHALFLDFGGPEGELQLDLRSCPKPVVFILHSFLS
AKVTRLGLFA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacggggcgcgtgcgcggggcacaacggagcggcctgctggaggtgctggtg
cgggacggcggctggtgccgagtcctagccacgctcggcgaggacagcctcacgctgagc
gctgaggaggccgccaccaacaacagcagcggcggcggtggagttggcctgggggcgggc
gtcgagagcagcttcaacggcctcaacggccctccggctccgtcgtcgacatccccgcag
caaggacgcggcccggcggcggaggacgaggggcctgaggaggccgtgcccgagtcgatc
gccaacatcaagcgggtggtgcgcgtcctcaagcaggaggtcggcggcctgggcatcagc
atcaagggtggcaaggagaacaagatgcccgtgctcatctcgaagatcttcaaggggctg
gcggccgagcagacgggcggcctgtacgtgggcgacgccatcctgtcggtgaacggcgcg
gacctgcgcgacgccactcacgacgaggccgtgcaggcgctcaagagggccggacgcgag
gtcgtgctggaagtcaagtacctgcgtgaggtgacgccctacttcaagaagggctctccc
atcggagagctgggctgggaggtggcgcctccgctcacgcccaagcccagcctcgcggtg
gcggcagcggccggcaacgcggcgggcggctcgccagacgcgggggtccacgacgccgcc
aaggacaagaagcgaatcccgctcaagatgtgcttcgtcacgcgcaacctcagcaagccg
gaccccgagaacaggctgatcgagctgcactcgccagacagcgcccacaccatcgtgctg
cgctgccgcgactctgccggtgcccacgcgtggttcggctcgctgcacgccaacgcggcc
gccctgacgcaggccgcggtgcgagaggccaaccagctgctgcaagccgccggcggcggc
ggcggcggcggcaactggggacccgtacagcacatgggctggctggcgcagcaggtgacg
gcagagggccactcgcagtggaaggccgtgctcatggtgctcaccgacagagacctggcg
ctgcaccagacgatgccgtggacgcgcgaggcctgggcggcgcccctcgtcagccacccg
ctgctcgccacgcggctggtgcactcgggggcgctgcacggctctcctccgccgccccac
acggagctgacgtttgcgactcgcacgggctcgcggcacggcgtggagacgcgcgtcttc
cgcgccgagacgaaccgcgagttggcggcgtggacgcggctcgtcgtgcagggctgccac
actgccgccgagctcatcaaggaggtgtccgtggcgtgcaagctgcgggacgccgactgc
acgctgagcatccactttgaggaggggttctgcctgagccgcgatggcgggggaggctcg
gtggggggggcggcggcgccgacgcccatcctgcgctacccgttcgagcgcctgcgcatg
tcgtccgacgacggggaccacgccctcttcctcgacttcggtggccccgagggcgagctg
cagctggacctgcgctcgtgccccaagcccgtggtgttcatcctccactccttcctctcc
gccaaggtgacgcggctcggcctgttcgcgtga
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