Petromyzon marinus (sea lamprey): 116954240
Help
Entry
116954240 CDS
T09614
Symbol
STX16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116954240 (STX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116954240 (STX16)
Membrane trafficking [BR:
pmrn04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
116954240 (STX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
MCPsignal
Syntaxin
Syntaxin_2
EIAV_Rev
Prominin
T3SS_needle_E
DUF2116
Motif
Other DBs
NCBI-GeneID:
116954240
NCBI-ProteinID:
XP_032830702
UniProt:
A0AAJ7U9G0
LinkDB
All DBs
Position
54:4042762..4061700
Genome browser
AA seq
330 aa
AA seq
DB search
MATRSLTEAFVLMRNNAVHTRHVLAEQVSSTTTTTTFSSSTTAARRRASELDEMADDRMA
LVSGLSMDPEAAIAVTKTLPPDWVDSVDEIQYEVARIKQKMKELAVLHDKHLNRPTLDDT
SEEEHAIEITTQETTQMFHRCQRAVQALQNRARGRGEQERRILANVVSSLAQGLQELSTA
FRHAQSGYLRRMKNREERSQVLFSTGGPLMEETEPDDLYDRWFTEEQLQLVEGNTEMVEE
REREIRQIAQSISELNEIFRDLAHMVVEQGTVLDRIDYNVEQSCVKTEEGLKQLQKAETY
QKKNRKMLAILLLFVILVIMILVLVGTKGR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccggagtctaaccgaggctttcgtgctgatgcggaataacgcggtgcacacg
aggcacgtgctggccgagcaagtgagtagcaccaccaccaccaccaccttctcatcatcc
acgaccgcggcgcgacgccgcgcctcggagctggacgagatggcggatgaccgcatggca
ctcgtgtccggtctcagcatggaccccgaggcagccattgccgtcacaaagacactccca
ccggactgggtggacagcgtggacgagatccagtacgaggtggcgcggatcaagcagaag
atgaaggagctggcggtgctgcacgacaagcacctgaaccggcccacgctggacgacacg
agcgaggaggagcacgccatcgagatcaccacgcaggagaccacgcagatgttccacagg
tgccagcgcgccgtccaggcgctgcagaaccgggcgcgtgggcgcggcgagcaggagcgc
cgcatcctcgccaacgtggtgagctcgctggcacaggggctccaggagctgtccaccgct
ttccgccacgcccagtccggatacctgcgccgaatgaagaaccgcgaggagcgctcgcag
gtcctcttcagcacggggggaccgctcatggaggagacggaacccgacgacctctacgac
cgctggttcactgaggagcagctgcagctggtggagggcaacacggagatggtggaggag
cgggagcgcgagatccgtcagattgcgcagtccatctccgagctcaacgagatcttccgc
gacctcgcgcacatggtggtggagcagggcacggtgctcgaccgaatcgactacaacgtg
gagcagtcgtgcgtcaagacggaggaggggctcaagcagctgcagaaggccgagacgtac
caaaaaaagaaccggaagatgctcgcgatcctcctcctcttcgtgattctcgtcatcatg
atcctcgtcttggtggggaccaaggggagataa
DBGET
integrated database retrieval system
