Petromyzon marinus (sea lamprey): 116954405
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Entry
116954405 CDS
T09614
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like protein isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116954405
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
116954405
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
Med12-PQL
Motif
Other DBs
NCBI-GeneID:
116954405
NCBI-ProteinID:
XP_032830770
UniProt:
A0AAJ7U6S0
LinkDB
All DBs
Position
55:4828499..4915079
Genome browser
AA seq
2398 aa
AA seq
DB search
MAALALLSYENRPLKRPRLGPPDVYPQDPKQKEDELNAVNVKQGFSNQLAFSGDEHGSGR
SFLNQIVPAKIGAYFSDILAEKFKLNTFQDTGKKKPQVNTKDNYWLVTARSQSAIHNWFT
DLASNKPLTGLTKKVPILSKKEEVFGYLAKYLVPPMRAAWLIKMTCAYYAAVSEAKIKKR
QVIDPCLEWTQILIRYLREQLSKIAEHYVATASQGGQSGTNPSTLTPEAEQAMKQWEYNE
KLAHYMFQEGMLERHEYLSWVLEVLERIKPADDELLKLLLPLVLQYSDEFVQSAYLARRL
AFFCARRLSLLLGDPSAATAMTGHGTGPRSHSPLLGLPSGAGVGGGGGGGNSAGGAAGVA
PAAPAGGSAQGTPSVTTTTGSTPPPQPPTGSANPTHPAFADFQSCPQHRSLIYGLSCMLQ
TVTLCCPSALVWNYSQNESKTNTPGSPLDLLPLAPSSLPMPGGNNAFNQQVRGRLRQVEQ
QIRQRGRAVEVRWSFDKCQESTAGFTISKVLYTLEQLDKHCFDRSDSSSCLDSLYNKIFC
SPQSKDGQEVAMPDDAIVTLLCEWAVSCKRSGKHRALVVARLLEKRQAELEADQRCGESE
VLDEKESISSGSLAGASLPVFQNVLLRFLDTQAPIITDPSNESEKMEFSNLVLLFCELMR
AEVFWHDGYMCTLISRGELAWGGAAAAAAVATAAAAAAAAAAASTSSSSGGGPGSGGGGG
GALGVCSGSVGGAGHQTPSPHPHTVPDGSGKMQHSQHHSSDMKEESGMVESMEMDSGATT
LFDDLDKSDYKAEFPTDFMVVHGKEMFSPLDTDPLASEPKPSPASDKPTQTKEDKPLRKE
KPLDPIFPPTHELPRHLQYALHFPIVQDESSVHECNQRLIVLYGVGRQRDEARHHIKRIT
RDILKILNKKSTAETGEENQKSKRSKPESFPTLEGIFSRFQQLSYFDQHQVTSQVASNVL
EQITSFASGTSYHLPLVQHIQFIFDIMEHSLNIHGLIDFVIQLLNELSVVEAELLLKSSS
LAGSYTTGLCLCIVAVLRHYHACLLLGPDQTAQVFEGLCGVVKHVANPSDCSSPERCILA
YLYDLCVSCSHLKSKFGDLLSGACSKVKQTIYCSVTPSTSNLLWDPEFMQDYIEHPDTQI
NYSLLGKVLHDSAVHRYSFVCNALMHICTGHQDTDRINDVGNLCAELTACCTTLSSEWLG
VLKALCYSSNHGCGFNDLLCSVDVSDLSFHDSLATFIAILIARQSFSLEDVIQHVALPSL
LAAVCGDSDAEPGARLTCRLLLHLFKTPQVTPSTPPGGKSSPGIRSSCDRHLLAAAHNSI
EVGAVFAVLKAILMLGDIDLGGQGLHSSHGDDVSVASLLAPIRGLDDAADDEVLSGGGGG
GAGGAGAGGPGGGKGARPGGRVTAIETASLSEYAKFALKTICQQEWVGERCLKEPESLRD
DKDLLLDPVLSNKQAQHLLQLICYPHGLPDAQDSDNPQRQRIKRILQHLDQWTLRQSWLE
LQLMIKQCHNSEMNNLLENIAKVTIEVFQQSAEMNSSSNLMSLGLLGHGGGGPGTGVGSS
DAAQNAAAAAKKKPFLSSSERKGVWLVAPLIAKLPSSVQGRVLKAAGEELEKGQHLGSSS
KKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQRESLLTSLQNQVNQIVSNWQEERYQD
DMKARQMMHEALQLRLNLVGGMFDTVQRSSQCTTEWAVLLLQIVSTGTVDVQTNNELFTT
VLDMIGVLINGTLASDLSSISQGIMEENKRAYMNLVKKLKKELGDKRSESIDKLRQLLPL
PKQTVDIITCEPMGSLIDTKGNKIAGFDSIDKKQGLQVSTKQKVSPWDMFEGQKNPAPLS
WAWFGAARVERRAPRYEEQHRLLLYHTHAHPRPLAYYLHPIPLPPEEVEPPAPPSAGPVG
GGADGDRKQAEASVEAAKPPEEDKKPKNTRKRKKPSQKEEYPQNSYNRMPPFGTIPPPQM
MHTTHPPYQGLGYTTMNQPLQTNYYTPSQPLAPGGPRIDTSRPFPGANTKQLLTDMLMRR
GSLPQPPGPGPGMPPHQQQAQAQNQQQQQQQHQQQMMHMKMIQRHTLMRHPAQMRPFAQV
QGQAMGQGAIYSQPVRQPNPLAQYSAMQQPAQAMSQGYGAFSAGGGGGGGNGGAGAAGAS
GAPMVVSGQHGSQTALLSPGYTGQPYQAGPAPGAGMVDSLRQIQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQPSGYVHQQAPAAYPRNLQNTPRLSHQPMQQGGMLSSIEQVPTGPMHSG
MAQMTPEMRHRMQQQQQQQQQQQQQQQQQQQQQQQQQQQRIIQLPQQQAPQPAQQPPMGM
QPIQQQQTMQTQQQQQTAALVRQLQKQLSSESLARQTSGQKLIRAHAHTHTHTYAARK
NT seq
7197 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctggcgctgctcagctacgagaataggcccctcaagaggcctcgtttggga
cccccagatgtctacccgcaggatcccaagcaaaaggaggacgagctgaatgccgtgaat
gtgaagcagggcttcagcaatcagctggccttctccggcgatgagcatggcagcggaagg
agtttcctcaaccagattgtaccagccaagattggcgcatacttcagcgacatactcgcg
gagaagttcaagctgaacacgtttcaggacacgggaaagaagaaaccgcaagtgaacaca
aaggacaactactggctggtgacggcccgctcgcagtccgccattcataactggttcaca
gacctggccagcaacaagcctctcacagggctcaccaaaaaggtgcccattctcagtaag
aaggaggaggtgtttggatacttggccaagtacctggtgcctcccatgcgtgccgcgtgg
ctcatcaagatgacgtgcgcctactacgccgccgtgtcggaggccaagataaagaagcgc
caggtcatcgacccgtgcctggagtggacccagatcctcatacggtacctgcgggagcag
ctgagtaagatcgcggagcactacgtggcgacggccagccagggcggccagagcggcacc
aacccttccaccttgacgcccgaggccgagcaggccatgaagcaatgggagtacaacgag
aagctggcccactatatgttccaggagggcatgctggagcggcacgagtacctgtcgtgg
gtgctggaggtgctggagcggatcaagccggccgacgacgagctcctcaagctgctgctg
cctctcgttctgcagtactcggatgagttcgttcagtcggcctacctggcgcggcgcctg
gcgttcttctgcgcccgccgcctctcgctgctgttgggcgacccttcagccgccacggcc
atgaccggccacggcacgggccctcgctcccactcgccgctcctcggccttccctccggc
gccggcgtcggggggggcggcggcggcgggaacagcgccggcggcgcagccggcgtggct
cctgcggcgccggcgggcggcagcgcccaggggaccccgtcggtgaccacgaccacggga
tccacccctcctccgcagccgcccaccggctccgccaacccgacgcacccggcattcgcc
gacttccagtcgtgcccccagcaccgctcgctcatctacgggctcagctgcatgctgcag
acggtgactctgtgctgccccagcgccctcgtgtggaattactcgcagaacgagagcaag
accaatacgcctggctcaccactcgacctgctgccacttgcgccctccagcctgccaatg
cccgggggaaacaacgccttcaaccagcaggtgcgtgggaggttgaggcaggtcgagcag
cagatccgtcagcgaggtcgtgccgtggaggtacgctggtccttcgacaagtgccaggag
tcgaccgcgggattcaccatcagcaaagtcctctacacgctggagcagcttgacaagcac
tgctttgaccgctccgactccagcagctgccttgactcgctctacaacaagatattctgc
tccccgcagagcaaggacggtcaggaggtggctatgcctgacgacgctatcgtgacgctg
ctctgcgagtgggccgtcagctgcaagcgttcggggaagcaccgcgccctggtggtcgcg
cggcttctcgaaaagcgtcaggcggagctggaggccgatcagcgctgcggtgagtcggag
gtgctggacgagaaggaatcgatctcgtcgggctcactggccggcgccagcctccccgtc
ttccagaacgtgctgctgcgcttcctggacacgcaggcgcccatcataaccgacccaagc
aacgagagcgagaagatggaattctccaacctggtgctgctgttctgtgagctgatgcgc
gccgaggtcttttggcacgacggctacatgtgcacgctgatctcgcgcggcgagctcgcc
tggggtggcgcggccgccgcagccgccgttgccaccgccgccgcggccgcagcggccgca
gcggccgcttccacctcgtcgtcgtcgggggggggcccgggcagcggcggaggaggaggg
ggcgccttaggggtctgctccggctccgtggggggagccgggcatcaaacgccgtcgccg
cacccccacacggtgcccgacggttcgggaaagatgcagcattcccagcaccattcgtcc
gacatgaaggaggagtctggcatggttgagtccatggaaatggactctggggcaacaact
ctctttgatgatttggacaagagcgactacaaggctgagttcccgactgacttcatggtg
gtgcatgggaaggagatgttttctcctctggacacggacccgctggcttcggagcccaag
cccagcccggcgtcggataaacccacgcagaccaaagaggacaagccccttcgcaaggag
aagcccctggaccccatcttccctccgacgcacgagctgccccgccacctgcagtatgcg
ctgcacttccccattgtgcaggacgagtcgtcggtgcacgagtgcaaccagcggctgatt
gtgctgtacggcgttgggcgccagcgcgacgaggcgcggcaccacatcaagcgcatcacc
cgcgacatcctcaagatccttaacaagaagagcacggccgagaccggggaggagaatcag
aagagcaagaggagtaagccggaatccttcccgacgctggaaggcatcttctctcgcttc
caacagctctcctacttcgatcagcaccaggtcacctcgcaggtcgccagcaatgtgctc
gagcagatcacgagcttcgcatcggggacgtcataccacctgccgctggtgcagcacatc
cagttcatcttcgacatcatggagcactctctcaacatccacggcctcatcgactttgtc
atccagctgctgaatgagctgagcgtagtggaggcagagctgctgctgaagtcgtcgagc
ctggctgggagctacaccacggggctgtgcctgtgcatcgtggctgtgctgcgtcactac
cacgcctgtctgctgctcgggccggaccagacagcgcaggtgttcgaggggctgtgcggc
gtggtgaagcacgtggccaacccttcggactgctcttcccccgagcgctgcattctcgcg
tacctgtacgacctgtgcgtgtcctgcagccacctcaagagcaaatttggggacctctta
agtggcgcctgctccaaagtgaagcaaaccatctactgcagcgtgacgccctccacgtcc
aacctgctgtgggaccccgagttcatgcaggactacatcgagcacccggacacgcagatc
aactactcgctgctcggcaaggtgctgcatgacagcgcggtccaccgctacagcttcgtg
tgcaacgcgctcatgcacatctgcacgggccaccaggatacggatcggataaacgacgtg
gggaacctgtgcgccgagctgaccgcgtgctgcaccactctgagctccgagtggctgggg
gtgctcaaggccctctgctactcctccaaccacggctgcggcttcaatgacctcctgtgc
agcgttgacgtgagcgacctgtcattccacgactcgctagccaccttcatcgccatcctc
atcgctcgccagagcttctcgcttgaggacgtcattcagcacgtggcgttgccctccctc
ctcgccgctgtgtgcggagactctgacgcagaacccggagctcggctcacctgccgtctg
ctgctgcacctcttcaaaactcctcaggtcacgccgtccacgccgccaggaggtaagtcc
agccctggcatccgctcatcgtgtgaccggcatctgctggccgcggctcacaacagcatc
gaggtgggggctgtcttcgctgtgctcaaggccatcctcatgctcggcgacattgatctg
ggtgggcaaggcctgcacagctcgcacggcgacgacgtgagcgtggcgagcctgctggcg
cctatccggggtctcgacgacgccgccgacgacgaggtcctgagcggcggcggcggcggc
ggcgccgggggtgccggtgccggcggccccggtggcggcaaaggggcccggccgggcggg
cgcgtcaccgccatcgagacggcgagcctcagcgagtacgccaagttcgcgctcaagacc
atctgccagcaggagtgggtgggcgagcgctgcctgaaggagcccgagtcgctgcgtgac
gacaaggacctgctgctggaccccgtgctctccaacaagcaggcgcagcacctgctgcag
ctcatctgctacccccacgggctgcccgatgcgcaggactcggacaacccgcagaggcag
cgcatcaagcgcatcctgcagcacctagaccagtggacgctcaggcagtcgtggttggag
ctgcagctgatgattaagcagtgtcacaactccgaaatgaacaacctcctggagaacata
gccaaggtgaccatcgaagtcttccagcagtcggccgagatgaacagctcctccaacctc
atgtcgctcggccttttgggacacggagggggcggccctggcacaggtgtcggcagcagc
gatgctgcgcagaacgcagccgcggccgccaagaagaagcccttcctcagctcgtcagag
cgcaagggcgtgtggctggtggcgccgctcatcgccaagctgcccagctcggtgcaaggc
cgcgtgctcaaggcggccggagaggagctggagaagggccagcacctcgggtcctcctcc
aagaaggagcgcgaccgacagaaacagaagagcatgtcgctgctgagccagcagcccttc
ctgtccctggtgctcacctgtctcaagggccaggatgagcagagggagagcctcctaacg
tctctgcagaaccaagtcaaccagatcgtgagcaactggcaggaggagcggtaccaggac
gacatgaaggctcggcagatgatgcacgaggcgttgcagcttcgtctcaacctggtcgga
gggatgttcgacacggtccagcgcagctcgcagtgcacgaccgagtgggcggtgctgctg
ctgcagatcgtcagcacgggcaccgtagatgtacagaccaacaatgagctcttcacgacg
gtgctcgacatgatcggtgtgctcatcaacggcacgctggcctcggacctctcgagcatc
tcgcagggcatcatggaggagaacaagcgcgcctacatgaaccttgtcaagaagctgaag
aaggagctgggcgacaagcgttcggagagcatcgacaaactgcgccagctgttgccgctg
cccaagcagacggtggacatcatcacgtgcgagcccatgggctccctcatcgacaccaag
gggaacaagatcgccggcttcgactccatcgacaagaagcagggcctgcaagtgtccacc
aagcagaaggtgtctccctgggacatgttcgagggccagaagaacccggcgccgctgtcg
tgggcgtggttcggcgcggcgcgagtcgagcgtcgagccccacgttacgaagagcagcac
cggctgctgctctaccacacccacgcgcaccctcgcccgctggcctactacctgcacccc
atcccgctcccaccggaggaggtggaaccgccggcgcctccgtcggcggggccagtgggg
ggcggcgcggacggcgaccgcaagcaggccgaagcgtccgtggaggccgccaagcctccg
gaggaggacaagaaacccaagaacacgcgcaagcgcaaaaagccgagccagaaggaggag
tacccgcagaacagctacaaccgaatgccgccattcggaacgataccaccaccgcagatg
atgcacaccacacacccgccctaccagggcctcggctacaccaccatgaaccagccactg
cagaccaattactacactcccagccagccgcttgcaccaggcggaccgcggatagacacg
agccggccgttcccgggcgccaacacgaagcagctgctcaccgacatgctgatgcggcga
ggatcccttccccagccgccaggaccgggccccggcatgcctccccaccaacagcaggca
caggcacagaaccagcaacagcagcagcagcagcaccagcagcagatgatgcacatgaag
atgatccagcggcacaccttaatgcgccacccggcacaaatgaggccttttgcacaggtg
cagggccaggcgatgggccagggagccatctactcgcagcccgtacggcagcctaacccc
ctcgctcagtacagcgcaatgcagcagccagctcaggcaatgtctcagggctacggcgct
ttctctgcgggcggcggcggcggcggcggcaacggaggcgcgggggccgccggcgccagc
ggggcccccatggtcgtgagtgggcagcacggttcgcagacggcgctcctgtcaccgggc
tacacgggacagccctaccaagcggggcccgcgccaggagccggaatggtggactcgctg
cggcagatccagcagcagcagcagcaacagcagcagcaacaacagcagcaacaacagcag
cagcaacaacagcagcagcagcaacaacagcagcagcctagtggctacgtacaccagcag
gccccggctgcttacccacgcaacctacagaacacaccccgactttcacatcagcccatg
cagcagggtggaatgctgtcgagcatagagcaggtgccgaccggcccaatgcattctggc
atggcgcagatgacaccggagatgcgacacaggatgcaacagcagcagcagcagcagcaa
cagcagcagcaacagcagcagcagcagcaacaacaacagcagcaacagcaacaacagagg
atcatacagcttccgcaacagcaggctccccagccggcacagcagccccccatgggcatg
cagcccattcagcaacagcaaacaatgcaaacacaacagcagcagcagacggctgctctg
gttcgccagctgcagaagcaactctcaagtgagtcactcgcccgacaaaccagcggtcag
aaactcatacgtgcgcacgcacacacacacacgcatacatatgctgcacgcaaataa
DBGET
integrated database retrieval system
