Petromyzon marinus (sea lamprey): 116954470
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Entry
116954470 CDS
T09614
Symbol
CCDC39
Name
(RefSeq) coiled-coil domain-containing protein 39 isoform X1
KO
K23729
coiled-coil domain-containing protein 39
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116954470 (CCDC39)
04990 Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
116954470 (CCDC39)
Cilium and associated proteins [BR:
pmrn03037
]
Motile cilia and associated proteins
96 nano-molecular ruler
116954470 (CCDC39)
Domain-containing proteins not elsewhere classified [BR:
pmrn04990
]
Other domain-containing proteins
Others
116954470 (CCDC39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-F_leu_zip
SlyX
Crescentin
DUF5793
Motif
Other DBs
NCBI-GeneID:
116954470
NCBI-ProteinID:
XP_032830900
EnsemblRapid:
ENSPMAG00000030579
LinkDB
All DBs
Position
55:complement(5253976..5287371)
Genome browser
AA seq
977 aa
AA seq
DB search
MSESVLAELQWDEGMAIPVANEENKALEMQLQKRLQENVSMEGEMMEQEERLHAMVEHLK
NVKQEFTNTQVLCRAREKELETESHFATLAEREGGRLKQELRRLDAEMHDARERQNNHQN
ELFRATRRLEDKRAELRWDKLALDTWLEEAARRDEDIEALQRYARLDEGKIRELMLRLDR
LTDEESQKRRYLENEVTETVMTQVELDKAAEEFRRAHRERQQLLQQWEETIQQMQRRDRD
VERCALELAEARQEQRGRKELLRQKREFLEREVENNAEHARRTAGSERLAQKLRRALLQM
DGARQQLHDQLETLKGTVERTATELENARAQVSNLGKEVQDKTNRLRALEGERESLRERL
KSSQETALSAEERALRMDEMFAQEQQRIKELEQTLAQVKNQKFAREQQLQEGRVRERQAE
VAMAGVRASIAGLRSRLQRLDADAIKQSNIIYSQDFQLAQLERRLAQLQGDISNEEKEQL
EAQVAKLKAQLSERNDTHALLTAQLRRVQDDIRHTRRDLEHSSAEKAELTSKIEQLDLEN
NSAEKEMKKITNAKQELLVEESLLKLECRRVRGLVAASADGVLSLEKRQQALQTALKERS
LENDARKHELLTLERGLQQERQALSAELHERLSKVDRMRKRYEILTVAMAPPEGEEDKSQ
AYYVIKAAQEKEEMQKEGDELDARIRRAEKEIRAMENTVQVVNGRNAALRRSHSKVPQGG
AEHEERLRLEEQKRSLEEKLKFKRRQVRELQQDLQVMNESMDELLSEGDVQEGDLKGHSD
SVQQLKKEIREQQEKIERGKKQCSRLSRELRAAAKSREATPAERDVALRELRDFGRAVTR
LLSDILGQSPEVAGDVHVFFQQAGITLPSPSSSTSSSSSSSRQSSRLSSARSSASSVRSG
VGSQRASPGAAVTTVQLGLELPPPSPSSPHGGTPAGRSPGPTGSAAPSGRGSVAESTKGS
AKSSRPSSRESQRSNRR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggtgctcgccgagctgcaatgggacgaggggatggcgatcccagtcgca
aacgaggaaaacaaagccttggagatgcagctgcagaagcgactgcaggagaatgtgtcg
atggaaggggaaatgatggagcaggaggaacgacttcacgccatggtggagcatctcaag
aacgtgaaacaggagttcaccaacacgcaggtgctgtgccgcgcgcgggagaaggagctg
gagacggagtcgcacttcgcgacactcgccgagcgcgagggcgggcgcctcaagcaggag
ctgcgccgactcgacgcggagatgcacgacgcgagggagaggcagaacaaccaccagaac
gagctgttccgggcgacgcgccggctggaggataagcgagccgagctgcgctgggacaag
ctggcgctcgacacgtggctggaggaggcagcgcgcagggacgaggacatcgaggcgctg
cagagatacgcacggctcgacgagggcaagatccgggagctgatgttgagactcgaccgg
ctcacggatgaggagtctcaaaagagacgatacctcgagaatgaagtcacggagactgtg
atgacgcaggtggagctggacaaggccgcagaagagttccgccgggcgcatcgggagcgg
cagcagctgctgcagcagtgggaggagacgattcagcagatgcagcggagggaccgggac
gtcgagcgctgtgcgctggagctggccgaagcgcggcaggagcagcgcgggcgcaaggag
ctgctgcggcagaagcgcgagttcctggagcgcgaggtggagaacaacgcggagcacgcg
aggcgcacggcaggcagcgagcgcctcgcccaaaagctgcgccgcgccctgctgcagatg
gacggcgcgcggcagcagctgcacgaccagctggagaccctgaagggcacggtggagcgc
acggccactgagctggagaacgcccgtgcacaggtgtcgaacctaggcaaggaggtgcag
gacaagactaaccggctgcgtgcgctggagggcgagcgggagtcgctgcgtgagagactc
aagtcgagccaggagacggcgctgagcgcggaggagcgggcgctgcgcatggacgagatg
ttcgctcaggagcagcagcgcatcaaggagctggagcagactctggcgcaggtgaagaac
cagaagtttgcacgggagcagcagctgcaggagggcagggtgcgcgagcggcaggccgag
gtggcgatggccggggtgagggcctcgatcgccggcctcagaagcagactccagcgcctc
gacgcggacgccatcaagcagagcaacatcatctacagccaggacttccagctggcgcag
ctggagcgccgccttgcccagctgcagggggacatctccaacgaggagaaggagcagctg
gaggctcaggtcgcgaagctcaaggcccagctgagcgagaggaacgacacgcacgccctg
ctgaccgcacagctccgcagggtgcaggatgacataaggcacactcggagagacctggaa
cactcgtctgctgaaaaggcggaactcacgagcaagatagagcagctggacctggaaaac
aattcagccgagaaggaaatgaagaaaatcacgaacgccaagcaggagctgctggtggag
gagagcctgctgaagctggagtgccggcgcgtgcgagggctggtggccgccagcgccgac
ggcgtcctctcgctggagaagcggcagcaggcgctgcagacagcgctcaaggagcgctcc
ctggagaacgacgctcgcaagcacgagctgctgaccctggagcgcggcctgcagcaggag
aggcaggcgctcagcgctgagctccacgagaggctctcgaaggtggacaggatgcgcaag
agatacgagatcttgacggtcgccatggcccctccggagggtgaggaggataaatcgcag
gcttactacgtgatcaaggccgcccaggagaaggaggagatgcagaaggagggagacgag
ctcgatgccagaatccgccgcgccgagaaggagatccgtgcgatggagaacacggtgcag
gtggtgaacgggcgcaacgcggcgctgcgcagatcgcacagcaaggtcccgcagggcggc
gccgagcacgaggagaggctgcgtctcgaggagcagaaacgatcgctggaggagaagctc
aagttcaagaggcgccaagtccgtgagctccagcaggacctgcaggtgatgaatgagagc
atggatgagctgctgagtgaaggggacgtgcaggagggggacctgaaggggcacagcgac
agcgtgcagcagctgaagaaggagatcagagagcagcaggagaagatcgagcggggaaaa
aaacagtgctccaggctgtcccgcgagttgcgcgcggccgccaagagccgcgaggcgacg
ccggccgagagggacgtggccctgcgcgagctccgcgactttggacgcgccgtgacgcgc
ctgctgtccgacatcctgggccagagcccggaggtggcgggagacgtgcacgtgttcttc
cagcaggctgggatcactctgccatcaccatcgtcttccacgtcatcgtcgtcttccagc
agcagacagagctcacgcctttcttctgcaagatcctctgcatcatcagtccgcagcggc
gttgggtcccagcgagcttcgccgggggctgcggtgacgaccgtgcagctgggactggag
ctgccgccaccgtcgccttcatctccgcacgggggcacccccgcgggcaggagccccggc
cccacgggttccgcggctcccagcggccgcggctcggtggccgagagcaccaagggaagt
gcaaaatcgtctcggccgagcagtcgtgaaagtcagcgcagcaatcggcgatag
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integrated database retrieval system
