Petromyzon marinus (sea lamprey): 116954477 Help Entry 116954477         CDS       T09614                                  Name (RefSeq) collagen alpha-2(IV) chain-like   KO K06237   collagen type IV alpha Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn04510   Focal adhesion pmrn04512   ECM-receptor interaction pmrn04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pmrn00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116954477  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     116954477   09142 Cell motility    04820 Cytoskeleton in muscle cells     116954477  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pmrn04147]     116954477    00536 Glycosaminoglycan binding proteins [BR:pmrn00536]     116954477 Exosome [BR:pmrn04147]  Exosomal proteins   Exosomal proteins of other cancer cells    116954477 Glycosaminoglycan binding proteins [BR:pmrn00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116954477 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  116954477 NCBI-ProteinID:  XP_032830915 UniProt:  A0AAJ7XE19 LinkDB All DBs Position 55:complement(9877745..9933732) Genome browser AA seq 1587 aa AA seqDB search MEEVVMEEVAMCSLVAQGLPGELGKRGPPGSGGPRGPRGDPGLGGGPGQPGQPGFPGFPG AKGIKGDTTSIPPGLIGPPGDSGFPGSDGEQGPAGNPGRQGPPGTPGRDGPPGSAGRPGA PGDPGDNVPGLRGERGDVGDVGFPGPKGFSRLVETPPQPLTKGEKGDPGEPARGGEQGPP GPRGQSGFSGEPGDPGFPGRPGFATGPPGATGPEGYPGRKGQPGFPGSPGNPGFPGLKGE QGDRGLPGPEPFSVGQEGLPGDTGSPGNPGPSGAPGNRGTPGSPGPPGQIIGGPAEDGIP GFPGTRGPKGYSGDPGAQGQGYPGAPGRDGVPGPPGAKGASAGQAGGGGGGSPGQPGVPG RDGPPGTRGSPGSPGDCDCRSMAGPRPFPGRPGAPGPPGRPGMFGGLGPNGSRGDPGPSG PTGLNGLPGAPGPTGPQGEKGERGDPSRVSATAKGEKGNPGLPGPSGQPGQPGSPGSRGR DGNPGFKGPPGDAGSSVRGDIGPPGNPGRLAVSGQPGAPGMGLVGLPGVQVPGDPGIPGL PGFPGARGPQGDTLPCPVKGEAGRPGLPGLPGPSGPPGLDGFRGTPGFPGTPGLKGDMGD PGVPGVGGTLGFPGPSGDPGLPGSPGRPGATGSLGQPGRPGTPGSKGPPGDVLGARAGEP GPSGPPGPPGEKGIPGDRGRDGERGRDGSLGFPGVKGDRGVGGFPGNPGPDGRPGPSSPG PVGLPGPPGSSGRPGQNGFPGSPGPQGDPGLSVSEGYKGLTGPPGFPGLPGPPGPPGSPS SLGRDGNPGQPGFPGPKGDPGILGFPGPPGPMARSGEPGLRGPQGQNGAAGRPGAPGANG RKGEGGDPGQPGLTVAGPDLRGQTGDLGDAGFPGTPGFPGRAGDPGPNGRPGAPGRPGFP GAPGSLLGFVGDPGLPGFAGLVGVKGPPGFPGPPGFPGSVGPPGSDGFPGRPGYPGGAGF RGAKGELGDARGQPGPPGFKGEAGTPGLPGAPGEAGFPGQPGPPGFPGGSGPSGFRGDTG SPGFPGGPGSVGDVGDRGPDGFNGPPGPLGPPGPGGPPGSPGFVGSPGLTGLDGLPGGKG PPGPPGVGVPGPLGPPGRDGSPGTPGTSFPGSPGEPGGPGLPGDSGFPGFPGVPGPPGER GPVVGPLPGERGTPGSPGRDGEPGRPGSAGRPGALGPSGPRGKPGFSGGPGGGGGPGLDG DAGTPGTPGSPGSSGYKGSRGDPGGLGFPGQEGFPGDPGFPGEQGDSGWPGSQGPSGAPG LPGPQVDFTGLRGAPGPIGPPGELGLAGLPGPPGPQGFPGGSGSPGQPGKQGTNGFPGRK GAAGEPGRAGPLGPTGLPGERGSPGAAGAPGLVSDAELLREDGGFLLVKHSQSVEVPACP QGMARMWDGFSLLYIEGNEKAASQDLGLAGSCLPRFSTMPFIYCGVDAVCSYASRNDKSF WLSSTAAIPMMPVSGEDIRPYISRCSVCEAPTQAIAVHSQDSEIPRCPPGWRSLWIGYSF LMHMASAEGGGQPLESPGSCLEDFRTSAFLECQGPRGTCHYFADEHSFWLARVAPASQFA PPRPGTFKDAFEQRSRISRCQVCLKNV NT seq 4764 nt NT seq  +upstreamnt  +downstreamnt atggaggaggtggtgatggaggaggtggcgatgtgctctctggttgcgcagggtttgcct ggggagctggggaagcggggccccccagggtctgggggcccccgggggccgcggggcgac cccggcctgggcggggggcctgggcaaccgggacagccgggattcccggggttccctgga gcaaaggggatcaaaggggacacaacttcaatcccgccgggtctgatcggacccccgggt gattctggatttcctgggagcgatggcgagcagggcccggccgggaaccccggccgccag ggcccgcccgggacgccgggacgcgacgggcccccgggctctgcaggacgccccggtgcc ccaggagacccgggagacaatgtccctgggctgagaggggagcgtggagatgtgggagat gttgggtttccgggacccaaagggttctctcggctggtggagactccaccacagccactc accaagggagagaagggtgaccccggggaaccggcgcgtggcggggaacagggtccacca gggcccagagggcaatcgggcttctccggtgagccaggggatccgggatttccggggcgg ccggggttcgctacgggcccacctggggccaccggcccagaggggtaccctgggaggaag ggtcagccaggattcccggggtcaccaggaaacccaggttttccagggttaaagggtgaa cagggagatcggggtcttccaggccctgaaccgttcagtgtggggcaggaaggccttccc ggagacacggggtcccctgggaaccccggaccgtccggtgcccccgggaataggggcacc ccaggatctcccggtcctcccggccagatcatcggtggcccagctgaggatggtatccct gggtttccaggcacgcgggggcccaaggggtattccggggaccccggggcccaggggcag gggtaccccggcgcccccggtcgcgatggagtgccggggccccctggagctaaaggggcc agcgccgggcaagccggtgggggtggcggcgggtcccccggtcaacccggggttcccgga cgagacggccctcccggaactcgtgggagcccaggcagccccggggactgtgactgccgc tccatggccgggccccggcccttccccggccgacctggggcccccggccctcccggccgc ccggggatgttcgggggcctgggtcccaacgggagcagaggagacccggggccctccggc cccactggcctcaacggcctgcccggtgcgccaggacccacagggccccaaggggagaag ggggagcgcggggacccatccagggtctccgctacagctaaaggcgagaagggcaaccct ggtttgccagggccgagcggacaacctggtcaaccggggtctccggggtcaagaggacga gatgggaaccccgggttcaagggccccccgggagacgccggcagcagcgtccggggggac atcggcccccctgggaaccccgggcgcctggctgtttcgggacagcccggtgccccgggg atggggctggtaggactgccgggagttcaggtacctggcgaccctgggattccaggtctg cccggcttccccggcgcacggggaccccaaggtgacactttgccgtgtcctgtgaaggga gaagccggccgaccggggctgcccggattaccgggcccaagtggacccccggggctggac ggattccgagggacccccgggttcccggggaccccgggcctcaagggggacatgggggac cctggggtcccaggagtggggggcacactaggcttccctgggcccagtggggacccaggg ctgccgggctccccggggcgccccggagcaacagggtccctggggcagcccggccgaccc gggactccgggaagcaaggggcccccaggggatgtgctgggggcccgagccggagagccg gggccttcagggccccccgggccccctggggagaaagggatacccggggaccgtggccgg gatggggagagaggcagagatggatcgcttggctttcccggggtcaagggcgaccgaggg gtcggcggattccccggaaacccagggcctgatggaaggccggggccctcctcaccgggg cccgtgggccttcccgggccccctggatcttcaggccggcccggccagaatggcttccct ggctccccagggccgcagggagaccctgggctctcagtgtccgagggatacaaggggctc actgggccccccgggttccccgggctgcctggacctcccggaccccccgggtcaccgtct tctctgggccgggatgggaaccctggacagcccggcttccccggccccaaaggagacccc gggatcctgggcttcccgggtccacctgggcccatggcacgctcaggggagcccggcctg cgtggcccacagggtcagaatggagccgcgggccggcccggggccccaggggccaacggc aggaaaggcgagggaggagacccggggcagcccggcctcactgtggccggccctgacctt cgcgggcagacaggggacctgggagatgcggggtttcctgggaccccggggttccccggt cgcgcaggagacccgggccccaacgggagaccaggggccccgggtcgtcctggtttcccc ggcgctcccggctccttgctgggctttgtcggagaccccgggctccccggatttgccgga ttggtgggggtcaagggcccccctggttttcctggaccccccggattcccaggatctgtg ggacccccgggaagtgacggcttcccagggcgcccaggataccccggcggtgctggattc cgcggcgctaaaggagaactgggagatgctcggggtcagccggggcccccaggcttcaag ggcgaggcagggaccccagggttgcctggggccccgggcgaggctgggtttcccgggcag cctgggccccccggtttcccgggtggatctggaccgagtggtttccgtggcgacactgga tcccccggtttcccaggaggtccgggttccgtgggtgacgttggggatcggggccccgac gggtttaacggcccccctgggcccctgggcccccccggtccgggtgggccccccggttcc ccagggtttgttgggagccccgggctcaccggactggatgggctaccaggaggcaaaggc ccccctggcccacccggtgtgggggtgccgggtcccttgggccccccaggacgggatggc tcacctgggacccccggaacgtcttttccagggtcgccgggggaacctggggggcctggg ttgccaggagatagtggattccctgggtttcctggagtgccaggaccccctggggagagg ggccctgtggtgggaccccttcccggggagcgcgggaccccggggtccccggggagggac ggggaaccagggcggcctgggtccgctggccgcccgggtgctttgggaccctcagggccc agggggaagcccggcttctctgggggccccggaggaggcgggggcccggggcttgatgga gatgccgggactcctgggacacccggcagccccggctcctccggatacaaaggcagccgt ggagatcctggcggactgggattccccgggcaggaaggcttccccggcgaccctgggttt cctggagagcagggagactcgggatggccaggctcacagggcccatctggggcccccggc ctgcctggcccacaggtggacttcaccggcctgaggggagcgccggggcccatcggccca cctggggagctgggcctggccgggctgcccggtcccccgggcccccagggattcccagga ggcagtgggtctccggggcagccagggaaacagggaaccaacggattccctggcaggaag ggggcagcaggggagccgggtcgagcagggcccctggggcccacgggactcccaggcgag cgcggctccccaggggcggcgggcgcgccgggcctggtgagtgatgccgagctgctgcgc gaggacgggggattcctgctcgtcaagcacagccaatcggtagaggtgcctgcatgcccc cagggcatggcacgcatgtgggatggcttcagcctcctctacatcgagggcaatgagaag gccgcctcgcaggacctgggcctggcgggatcgtgcctgccgcgcttcagcacgatgccc ttcatctactgcggcgtggacgccgtatgcagctacgcatcgcgcaacgacaagtccttc tggctctccagcaccgccgccatccccatgatgcccgtgtccggagaagacatccgcccc tacattagtcggtgctcggtgtgcgaggcgccgacacaagcgatcgctgtgcacagccag gacagcgaaattccacggtgcccgccagggtggcgtagcctctggatcggctactccttt ctcatgcacatggcgtcggcggaaggtggcgggcagccactggagtctccgggctcatgc cttgaggacttccgcacatcggcctttcttgagtgccagggcccgcggggcacctgccac tactttgcggacgagcacagcttctggctggcacgtgtagcgcccgcctcccagttcgcg ccaccacggcccggcaccttcaaggacgcgttcgagcagcggtcacgcatcagccgctgc caggtctgcttgaagaacgtgtga

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