Petromyzon marinus (sea lamprey): 116954542
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Entry
116954542 CDS
T09614
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1B-like
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116954542
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116954542
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
116954542
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
116954542
NCBI-ProteinID:
XP_032831017
UniProt:
A0AAJ7UA23
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All DBs
Position
55:4660323..4666453
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AA seq
368 aa
AA seq
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MSGGRRWRRRRADGGSSSSAENSISALPYDAPQQQQQPPPQQQQQQPPHSSNNNSCRRHR
NLAPQTRFQPWDDRDRPVLGRGTAQSDDLEAMGGVGGAATESGRSGSARFEAAASSPAAG
ASGASPASASASSATSNPASTAAATSSRSSAASAPASSAAPGLLAVKTFPGFARGNLGLC
FSCKFSGTARPLTFSVCHGRPHDNRCVFRPYPCPCPGLTACPWQGSLRGVLPHLAHAHPS
VPHLRGTDVLFQATNLERPPPTFWLMVQVCLGHQFLLVLEKRTVSQEVRFATCLLLVGPG
HLAPSFTYRVELGSSHHRRLSYEATPRPLRDGVARVIADKDGLFFGQEVARLFAENDSLA
IGFSIARY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgggaggcggtggcggcggcggcgtgctgatggtggtagcagcagcagcgcg
gaaaattcaatctccgctttgccttatgatgcgccccaacaacaacaacaaccaccacca
caacaacagcagcaacaaccaccacacagcagcaacaacaacagctgccgtcgccaccgc
aacctagctccgcagaccagatttcaaccgtgggacgacagagaccgtcctgtcctcggt
cggggaacggcgcaatccgatgacttggaagctatgggtggggtcggtggtgcggccacg
gaatctggccgaagtggttctgcgaggttcgaagcggcggcatcgtcaccagctgcagga
gcatcgggagcatcgccggcatcggcatcggcatcatcagcaacttcaaatccagcatcg
acagcagcagcaacatcatcaagatcgtcagcagcgtcggctccagcttcatcagcagca
ccgggtctgctggccgtgaagactttccccggctttgcaaggggcaatttgggactctgc
ttctcgtgcaagttttccggaacggctcgccctctgacgttctccgtgtgccacgggaga
ccccacgataatcggtgcgtcttcaggccctacccgtgcccctgccctggcctcaccgcc
tgcccctggcagggctccctgcgtggtgtgcttccacacctggcgcatgctcaccccagc
gtgccgcacctgcgcggcacagacgtcctcttccaggcgaccaacctagagcgaccgccg
cccacattctggctcatggtccaggtgtgcctgggccaccaattcctcctggtcctcgag
aagcgcactgtgtcgcaggaggttcgatttgcgacctgcctgctgctagtggggcccggc
cacctggctccatccttcacgtaccgcgtggagcttggcagctcacatcaccgcaggttg
agctacgaggcgacgccgcggcctctgagggacggcgtcgcgagggtcatcgccgacaaa
gatggcctcttcttcggccaggaggtcgcccggctgttcgccgagaacgacagcctggcc
atcggattctccattgcccggtactaa
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