Petromyzon marinus (sea lamprey): 116954574
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Entry
116954574 CDS
T09614
Name
(RefSeq) lysosome-associated membrane glycoprotein 1-like isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03272
Virion - Hepatitis viruses
pmrn03273
Virion - Lassa virus and SFTS virus
pmrn04140
Autophagy - animal
pmrn04142
Lysosome
pmrn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116954574
03272 Virion - Hepatitis viruses
116954574
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116954574
04142 Lysosome
116954574
04140 Autophagy - animal
116954574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116954574
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116954574
04090 CD molecules [BR:
pmrn04090
]
116954574
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
116954574
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
116954574
Other autophagy associated proteins
RNautophagy/DNautophagy
116954574
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
116954574
CD molecules [BR:
pmrn04090
]
Proteins
116954574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
116954574
NCBI-ProteinID:
XP_032831104
UniProt:
A0AAJ7U8H3
LinkDB
All DBs
Position
55:8153207..8172997
Genome browser
AA seq
427 aa
AA seq
DB search
MRIPWALPLVCCFLHLARSFIVRDPEDGSICIIANVSATFQVQYELEDGSMGMATFDLPL
NASTVGTECGGGGRDVDLMLSFSKWRHTLSVVMNHNSISFRGDAWHFMYNLGDPEIFPSA
RDKDIKVVLFESDIAAPLNTAFTCWAKQSATSKHASVMLWNLRIQPYVVDDEISNVATHC
KGDFPLTTPSTSTTATPSPATPSPATPSPGPANPSPSPTGPPPAVPVGSYNISVGNHSCL
LAQMALEVVLVYSTVRNETRRGVLHVNPNATRATGSCGDATASLSLSFSQGAVFLGFSAN
KSTDKFYLTSVNVTLLDAFPDAPWLELAGRNGSLAMFAAPLGRSYSCASQQTVVVTPALE
LLVSHLHLQPFHVTKGRYDMAVSCPQDSLLGFVLPLVVGAGLIVLVFISVLAYGIGRKKS
RTTYDEI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaggattccgtgggcgctgcctctggtgtgttgcttcctccacctggcgcgatccttc
atcgtccgagaccccgaggatggaagcatctgcatcattgccaacgtgtcagcgacattc
caggtccagtacgagctcgaggacggctcgatgggaatggcgaccttcgacctcccgctg
aacgcgtccacggtgggcaccgagtgcggcggtggtggccgcgacgtggacctgatgctg
agcttcagcaagtggcggcacacgctctccgtcgtcatgaaccacaacagcatttccttc
cgcggcgacgcgtggcacttcatgtacaacctcggcgacccagaaatcttccccagcgcc
agggacaaagatatcaaggtggtcttgttcgagagcgacatcgcggctccgctcaacacg
gcgttcacttgctgggccaagcagtcggccacctccaagcatgcctccgtcatgctgtgg
aacctgcgcatacagccctacgtggtcgacgatgaaattagcaacgtggcgactcactgt
aagggggactttccgctcacgaccccctcgacttctaccactgcgaccccgagccctgcg
accccaagccctgcaaccccaagtcccggccccgcgaacccgagcccaagccccacgggc
cctccgccggccgtccccgtcggctcctacaacatcagcgtgggcaaccacagctgcctg
ctggcgcagatggcgctggaggtggtgctggtgtacagcacggtgcgcaatgagacgcgg
cgcggcgttctccacgtgaaccccaacgcgacgcgtgccacgggttcatgcggcgacgcc
acggccagcctctcgctctccttcagccagggcgccgtgttcctcggcttcagcgcgaac
aaatccacggacaagttctacctcacgtcggtgaacgtgacgctgcttgacgcgttcccg
gacgcaccgtggctggagctggcggggcgcaacgggagtctggcgatgttcgcggcgccg
ctcggccgctcctacagctgtgcgagccagcagacggtggtggtgacgcccgcgctggag
ctgctcgtctcccacctgcacctgcagcccttccacgtgacgaagggacgctacgacatg
gccgtgagctgcccccaggactctctgctgggcttcgtgctgcccctcgtggttggcgcc
gggctgatagtcctcgtcttcatctccgtgctcgcgtacggcatcggccggaagaagagc
cgcaccacctacgatgagatctga
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