Petromyzon marinus (sea lamprey): 116954629
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Entry
116954629 CDS
T09614
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116954629 (TRPC1)
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116954629 (TRPC1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
DUF4194
Motif
Other DBs
NCBI-GeneID:
116954629
NCBI-ProteinID:
XP_032831183
UniProt:
A0AAJ7UAD8
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Position
55:8663358..8691981
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AA seq
777 aa
AA seq
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MAGLYQSRDEPGSDKFLNLKDMREVKEDTTIDEKIFLLACEKGDYYMVRRLLEERGRSGL
NVDCLDVLGRSAVNISIENENLDVLMLLLQHSCQANDALLVAIDAGVVGAVDILLNHRPR
RASKPTIEKLMQKMQNPEYSTSMDVAPVILAAHRDNYEILTVLLKQDISLPRPHAVGCEC
CICQAKNRKDSLRHSRFRLDIYRALASPALIMLTEEDPVLRAFELSVDLKELSLVEVEFR
NDYEQLAQQCKSFAKDLLAQARNSRELEAILNHTASDEPVDKRGLLEERMNLSRLKLAIK
YDQKEFVSQSNCQQFLNTVWYGEVSGYRRRHVVAKGLTVLALGLAWPGLALAYLLGPRSR
LGRVAHAPFTKFVAHGASYFTFLLLLNHYSLVYNEDKKNTMGPALELVDYLIIMWMAGLL
WADVKKLWYESLDDFMAESRNQLSFVMNSLYVATFTLKVVANCKFHAIAERKDWDAFHPT
LVAEGLFAFANVFSYLRLFFMYTTSSMLGPLQISMGRMLRDFVKFLGMYLLVLVSFAVGL
TQLYAKFPDEGADCPGIFCERQSNDTFHSFLGACSALFWYVFSLAHVALFVTRVSTADEL
QSFVGALIVGTYNVVVVIVLAKLLVAVLHNSFQLIAQDHEDKEWKFARAKLWLSYFDDKC
TLPPPFNLLPHPKTICYALGGLRKLVLSHTASGRAKRENSVREWRSVRARRAASYQKVMC
CLVHRYLMAARRRRHTSEQATVESLSELRQDLGKFRNEMRDLLGFRTAKYATYHTRN
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctttaccagagccgggacgaaccaggctccgacaagtttctcaacctcaag
gacatgcgcgaggtcaaggaggacaccaccatcgacgagaagatcttcctgctcgcctgc
gagaaaggcgactactacatggtgcggcggctgctggaggagcggggccgttcgggcctc
aacgtggactgcctggacgtgctgggccgcagcgccgtgaacatctccatcgagaacgag
aacctggacgtcctcatgctgctactgcagcactcgtgccaggccaacgacgccctgctc
gtggccatcgacgccggtgtggtgggggccgttgacattctgctcaaccaccggccgcgg
cgcgcctccaagccgaccatcgagaagctgatgcagaagatgcagaaccccgagtactcg
accagcatggacgtggcgcccgtcatcctggcggcgcaccgcgacaactacgagatcctc
accgtgctgctcaagcaggacatctcgctgccgaggccgcacgccgtcggctgcgagtgc
tgcatctgccaggccaagaatcgcaaggatagccttcgccactcccggttccgtctggac
atctaccgcgcgctcgccagccccgcgctcatcatgctcaccgaggaggaccccgtgctg
cgcgccttcgagctcagcgtggacctcaaggagctcagcctcgtcgaggtcgagttcagg
aacgattacgagcagctggcgcagcagtgcaagagctttgccaaggacctcctggcgcag
gcgcgcaactcccgcgagctggaggccatcctgaaccacacggccagcgacgagcccgtg
gacaagcgcggcctcttggaggagcgcatgaacctgagccgcctcaagctggccatcaag
tacgaccagaaggagttcgtgtcgcagtccaactgccagcagttcctcaacacggtgtgg
tacggcgaggtgtcggggtaccggcgccggcacgtcgtcgccaagggcctcacggtgctg
gcgctcggcctcgcctggccgggcctggctctcgcctacctgctggggccgcgctcccgg
ctgggccgcgtggcgcacgcccccttcaccaagtttgtggcgcacggcgcgtcgtacttc
accttcctgctgctgctcaaccactactcgctggtgtacaacgaggacaagaagaacacg
atggggcccgcgctggagctggtcgactacctcatcatcatgtggatggccgggctgctg
tgggccgacgtgaagaagctctggtacgagagtctggacgacttcatggccgagtcgcgg
aaccaactgagcttcgtcatgaactcgctctacgtggcgacgttcaccctcaaggtggtc
gccaactgcaagttccacgccatcgccgagcgcaaggactgggacgccttccacccgacc
ctcgtggccgaggggctgttcgcgttcgccaacgtcttcagctacctgcgcctcttcttc
atgtacaccaccagctccatgctggggcccctgcagatctcgatggggcgcatgctgcgc
gacttcgtcaagttcctgggcatgtacctgctggtgctcgtctcgttcgccgtgggcctc
acccagctctacgccaagttccccgacgagggcgccgactgcccgggcatcttctgcgag
cggcagagcaacgacaccttccactcgttcctgggcgcgtgctcggcgctcttctggtac
gtcttctcgctggcacacgtggcgctgttcgtgacgcgcgtctccacggccgacgagctg
cagtcgttcgtgggggcgctcatcgtgggcacctacaacgtcgtggtggtcatcgtcctg
gccaagctgctcgtcgccgtgctgcacaacagcttccagctgatcgcccaggaccacgag
gataaggagtggaagttcgcccgggcgaagctgtggctcagctactttgatgacaagtgc
acgctgccgcccccgttcaacctgctgccgcaccccaagaccatctgctacgcgctgggc
ggcctgcgcaagctcgtgctgtctcacaccgccagcggcagggccaagcgcgagaacagc
gtccgcgagtggcgcagcgtgcgtgcgcgccgcgccgccagctaccagaaggtgatgtgc
tgcctggtccaccgctacctcatggcggcgcggcgacggcggcacacgtcggagcaggcc
acggtcgagagcctgagcgagctgcgccaggacctgggcaagttccgcaatgagatgcgc
gacctgctgggcttccgcactgccaagtatgccacctaccacacccgcaactag
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