Petromyzon marinus (sea lamprey): 116954637
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Entry
116954637 CDS
T09614
Name
(RefSeq) thyroid hormone receptor beta-like
KO
K08362
thyroid hormone receptor beta
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04080
Neuroactive ligand-receptor interaction
pmrn04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116954637
04081 Hormone signaling
116954637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116954637
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmrn03310
]
116954637
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116954637
Nuclear receptors [BR:
pmrn03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
116954637
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
New_glue
Motif
Other DBs
NCBI-GeneID:
116954637
NCBI-ProteinID:
XP_032831200
UniProt:
A0AAJ7XEB5
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Position
56:7476267..7505223
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AA seq
448 aa
AA seq
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MILGHRDPKRQDVLSNTPSRLGILPNPVSTTTTTTTTTSSSSSTTSSSSSGGGSPLPPPA
SRPRPSRRGGGIKREASGSREPKKVYIPSYLEKDEVCVVCGDKATGYHYRCITCEGCKGF
FRRTIQKKLHPLYACKLEGVCLVDKGTRNHCQECRFNKCLAMGMATDLVLDEGKRLAKRR
LIAENRERRRRGETQRSGAWERPGPTRHEWALLQAVTDAHRATSAEGSLWRQHRRFLPED
IGQVVAGGDRVDVKAFCHFISIITPAIIRVVDFAKKLPVFCELPCEDQIVLLKGCCMEIM
SLRAAVRYDAGSETLTLSGEVAVTSEQLRSGGLGLVSDSIFELGRSLAAFHMDDTEVALM
QAVLLLSSDRPGLTCVDAVERAQEEHLLALEHYINQRHHAMPFFWPKLLMKVTDLRTIGA
CHTSRLLHMKVECPAELFPPLFLEIFDD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatactgggtcaccgtgacccgaagagacaagacgttctctccaacactccctcccgc
ctcggcatcctgcccaacccggtctccaccaccaccacgaccaccaccaccacctcctcc
tcctcctccaccaccagcagcagcagcagcggtgggggcagccccctcccaccacccgcc
tcgcggccccgcccctcgcggaggggagggggcatcaagcgggaggcgagcggcagccga
gagcccaagaaagtctacatccccagctacctggagaaggacgaggtatgtgtggtgtgc
ggagacaaggccacgggctaccactaccgatgcatcacctgcgagggatgcaaaggcttc
ttccgccgcacgatccagaagaagctgcacccgctgtacgcgtgcaagttggagggcgtc
tgcctcgtggacaagggcacgcgcaaccactgccaggagtgtcgcttcaacaagtgcctc
gccatgggcatggccaccgacctcgtgctggacgaaggcaagcgccttgccaagcgccgt
ctgatcgcggagaaccgcgaacgccggcggagaggagagacgcagcggagcggcgcgtgg
gagcgtccgggccccacgcggcacgagtgggcgctgctgcaggccgtcaccgacgcccac
cgcgccaccagcgccgagggcagcctgtggaggcagcaccgccggttcctgccggaagac
attgggcaggtggtggcgggaggcgaccgcgtggacgtgaaggcgttctgccacttcatc
agcatcatcaccccggccatcatccgcgtcgtcgacttcgccaagaagctgcccgtgttc
tgcgagttgccgtgcgaggaccagatcgtgctgctcaagggctgctgcatggagatcatg
tcgctgcgggcggccgtgcgctacgacgcgggcagcgagacgctgacgctgagcggcgag
gtggccgtcacgagcgagcagctccgcagcggtggactcggcctcgtctccgactccatc
ttcgagctgggccgctcgctcgccgcgttccacatggacgacaccgaggtggccctcatg
caggccgtgctgctgctctcttctgaccggccgggcctgacctgtgtggacgcggtggag
cgggcgcaggaggagcacctgctggcgctggagcactacatcaaccagcggcaccacgcc
atgcccttcttctggccaaagctgctcatgaaggtgaccgacctgcgcacgatcggcgcc
tgccacaccagccgcctgctgcacatgaaggtggagtgccccgccgaactcttccctccg
ctcttcctcgagatcttcgacgactga
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