Petromyzon marinus (sea lamprey): 116954760 Help Entry 116954760         CDS       T09614                                  Symbol CASC3 Name (RefSeq) protein CASC3 isoform X1   KO K14323   protein CASC3 Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn03013   Nucleocytoplasmic transport pmrn03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pmrn00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     116954760 (CASC3)    03015 mRNA surveillance pathway     116954760 (CASC3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pmrn03019]     116954760 (CASC3) Messenger RNA biogenesis [BR:pmrn03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      116954760 (CASC3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  116954760 NCBI-ProteinID:  XP_032831430 UniProt:  A0AAJ7U806 LinkDB All DBs Position 56:complement(8259809..8286673) Genome browser AA seq 772 aa AA seqDB search MADRRRRTGASQDSDEEEEDEEEESDLSPGRGPEKAAAIPARAAESECESEGVPERDGVV LSGYESADDNYSHYSEDEKEEEEGSCSVTDDEVAEEGSSVPPAITGVVAGEKIASTPADK RPERPHRVRKPSHGSQEAPEDDAPPTGAGGKNSKRDEEEEDQKNPAFVPRKGLFFEHDIR GGNNKEDARAKVHNRKLWRDAGRWEHDRFREDEQAPKSREELVALYGYDIRSGAHADDAR PLRRPRYRSPTGRWSRESPPVNRGPYQAPKREPVERPARLRDEDRDTERRPAPRRPGPTT AGPAALPGRPRAYVEQRAYVEPRARAHTQGDSSRDQPPGTPAARDGARSSPQRHQQRHQQ HNGNGEEEGEKRAEILSAGTEAEVGARGAPAAAAAAATVAPATGDAAFAVDLAQDKAPER KSYSRVRRLRNKPSELPGQASTTDPVSPAPLAAPAPSTVPLVALPETQAATALPHQHNPQ QLQLQQPQAPPLKPLGERTRPIAALLPQPLWDVPVLEPSPVGRLEHGMAQISLGQTWNPG AQPHYLPTQREHRGGATHLPVNSVPPPFNRIEDLGGQAGRAKRYSSQRSRPVPEPHPTPP MHIPLIEGSYYDPNTAYQAPLYGHGGDSPAAIPPQGIMVQPDLNLPHPGLHPHQSPTHMY APPVSMATGQPPPPGQMLGYFPSNIMYPGAALPNPGYTYTPAPIPPPPPPPAHIFPPPQA QSQVYGGVTYYNTAQQQAQPKPSPPRRPSQPVSVKPPPEVSRKDRLKERSNV NT seq 2319 nt NT seq  +upstreamnt  +downstreamnt atggcggacaggcggcggcggactggcgcctctcaggacagcgacgaggaggaggaggac gaggaggaggagagcgacctctccccgggacgcgggcccgagaaggcggccgccatcccc gcgagggccgcggagtccgaatgcgagagtgaaggtgtccctgagagagatggtgtagtg ctttctgggtacgagagcgcagatgacaactactcgcactactcagaggatgaaaaagaa gaggaggagggctcgtgctccgttacagacgacgaagtagctgaagagggctcctctgtg ccccccgctatcactggcgtcgtcgccggagagaagatagcgagcacccccgcggacaag cggccggagcggccgcaccgagtgcgcaaaccttcgcacggctcgcaggaggccccggag gatgacgccccgcccaccggcgcaggcggcaagaattccaagcgggacgaggaggaggaa gaccaaaaaaacccggcgttcgtgccgcggaaagggctcttcttcgaacacgacattcga ggaggcaacaacaaggaggatgccagggccaaggtgcacaaccgcaagctgtggcgagac gcgggccgctgggagcacgatcgcttccgcgaggacgagcaggcacccaagtcgcgcgag gagctcgtggcgctgtacggctacgacatccgctcgggcgctcacgccgatgacgcccgg cctctccgccggcccagataccgcagccccaccggtcgatggagccgggagagtcccccc gtgaaccgcgggccttaccaggcccctaagcgggagcccgtcgagcggccggcacgtctg cgcgacgaggacagggacacggagcggaggcctgcgccgcggaggccgggcccaaccacc gccggtcccgcggcactgcccggcaggccccgcgcctacgtggagcagcgcgcctacgtg gaaccgcgcgcccgcgcccacacgcaaggagactccagcagggatcagcccccggggacg ccggcggcgcgggacggcgctcggtcgtccccgcagcgtcaccagcagcggcaccagcag cacaacgggaacggggaggaggagggcgagaagcgggcggagattttatccgcgggcacg gaggcggaggtaggagcgaggggcgctcctgctgctgccgccgcagcagcgaccgtggcg ccggcaaccggggacgcggcgttcgcggtggacctggcgcaggacaaggcgccggagcgg aagtcgtactcgcgtgtgcgccgcttgcgcaacaaaccctcagagctgccgggacaggcg tccacgacggaccccgtctcgccggcgccgcttgcggcgcctgcgccgagcacagtcccc ctcgttgcgctgcccgagacgcaggcggccaccgcgctaccgcaccagcacaatccgcag cagctgcagctgcagcaaccgcaggcgccacccctaaagccgctcggtgagcgcacgaga ccgatcgccgcgctgctgccgcagccgttgtgggacgtgcccgtgttggagccttcgccc gtgggtcgcctggagcacggcatggcgcagatcagcctcggccagacctggaaccccggg gcacagccgcactaccttcccacgcagcgcgagcacagaggtggtgccacgcatctccct gtcaattcagtgcctccaccgttcaaccgaatcgaggatctgggcggccaggccggccgg gcaaagcgctactcgtctcagcgcagtcggccggttcctgagccgcaccccacccccccc atgcacattccgctcatcgagggctcctactacgatccaaacacggcataccaggctccg ctgtacgggcacggtggggacagcccggctgccatccctccccagggaattatggtgcag cccgatctgaacctcccacaccctgggttgcacccgcaccagtcgcccacccacatgtat gcgccgcccgtctccatggcgacgggccagccaccgccgccgggccagatgctcggttac ttccccagcaacatcatgtacccgggggcggcgttgcccaaccccggctacacctacacg cccgcccccataccgccgcctccgccgccgcccgcacacatcttccctccaccgcaggcg cagtctcaggtttatggcggagtgacgtactacaatacggcgcagcagcaggcgcagccc aagccgtcgccgcctcgccgaccctcccagcccgtctctgtgaagcccccgcctgaggtg agcaggaaggacaggctgaaagaaaggagtaacgtgtga

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