Petromyzon marinus (sea lamprey): 116954775
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Entry
116954775 CDS
T09614
Name
(RefSeq) DNA topoisomerase 2-beta-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmrn03032
]
116954775
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116954775
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
116954775
DNA replication proteins [BR:
pmrn03032
]
Eukaryotic type
DNA Topoisomerases
116954775
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
116954775
Centrosome formation proteins
Centriole proteins
116954775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
116954775
NCBI-ProteinID:
XP_032831452
UniProt:
A0AAJ7UAX1
LinkDB
All DBs
Position
56:7846841..7904129
Genome browser
AA seq
1685 aa
AA seq
DB search
MSKSNGDAGLKWVTVFDTQHAEGGKTAPAGTAGGDPSKRLSVERIYQKKTQLEHILLRPD
TYIGSIEPTTQNMWIFDEDLGLNNREITFVPGLYKIFDEILVNAADNKQRDKNMTCIKIT
IEPETNTVSVWNNGKGIPVVEHKVEKMFVPALIFGELLTSSNYNDEERKVTGGRNGYGAK
LCNIFSKKFTVETACKESKKQFKQTWTENMGKSSDSKIRYFDGSDFTCVTFQPDLDKFGM
SSLDKDIVALMTRRAYDIAGSCKGVKVFLNGKKLPVTGFRSYVDMYMKDKVDETGNILKV
VHEVVGERWEVCLTASDKGFQQVSFVNSIATTKGGRHVDYVADQVVAKLIEVVKKKNKAG
VLVKPFQVKNHIWLFVNCLVENPTFDSQTKENMTLQHKRFGSTCQLSEKFTKAATNCGIV
ESILNWVKFKAQTQLNKKCSSVKHSKLRGIPKLDDANDAGGRNSQSCTLILTEGDSAKTL
AVSGLSVVGRDRYGVFPLRGKMLNVREASHKQIMENQEINSIIKIMGLQYKKSYEDAESL
RSLRYGKLMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHHFLEEFITPLVKVTKNKQELP
FYSLPEFEEWKKGSELNKTWRVKYYKGLGTSTAKEAKEYFAEMERHRIPFRYIGTEDDNA
ITLAFSKKKVDDRKEWLTNWMEDRRQRRLHGLPEQFLYGKETKYLTYNDFINKELILFSN
SDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQSLMMTI
INLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARMLYPAVDDNLLRF
LWDDNQRVEPEWYCPIIPLVLVNGADGIGTGWASRILNYDTREIVNNIRRMLDGEEPLLM
GPRYKNFKGTIDELGPNQYLMSGEVAVLDSTTVEITELPVRTWTQAYKETVLEPMLTGTD
KTPPLISDYKEYHTDTTVKFVIRMSEEKLTQAEATGLHKVFKLQSSATCNSMVLFDHMGC
LRKYESVADILREFYELRIKYYSLRKEWLEGMLHAESSKLNNQARFILEKIEGKITIENK
PKKELIQMLLKRGYDSDPIKNWKDAQEKAVDGGGGGADSDSDASDAAGGTGPNFNYILNM
PLWSLSRERKDELVKQRDIKAKELLELKRKSPSELWKEDLATFVEELDRVEAQEREEEVS
SMSTKAVKGKVGKPKMKRLQLEETQPSLHGRRVVPQVTLAMKAEASKKLGRKKVKTEGVD
GTPVKMEPGEDGGGGGGGGEDSESQPLVRRTAKRAPKTDKSEPGSKSARKGTASKKPKRN
PWSDSDGSDDLEDKSVSDADDMSIGLVPRENVPRRAAAMKPKKFTFDFSDGDDEDDDEVV
SSPPRRVRSKSPPSPVAKKKTSSFDFSDKEDEDDVALPPPPPPTKAKEAVDKRAPEPRKG
WKSTEFDWDEVMGTPSHPPQAPAASATTSSPAKPALSSDDEKPASAASPLVSSHASTKPP
AAATFPAKKPAASKKQSPAAKDGDKAKKKPSAKSKKPLSMDSDNDSDEVASSRKPAPAAK
GKGGGSRKRKVAASDSEKSDGEYSPQKKVTAKAATALSAATGKAGRGAAGGSKKGKKAVV
SDDEGSAGVDSDDGVGAGAKGAGAGAKGGGSSRGAQQRERPGRARKQVKYCEASDDDDND
DDFLG
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagcaacggcgacgcgggactcaagtgggtgaccgtgttcgacacgcaacat
gcagagggcggcaagacggccccggccggcacggcgggcggcgacccctccaagcggctg
tcggtggagcggatctaccagaagaagacgcagctggagcacatcttgctgcggcccgac
acctacatcggctccatagagcccaccacccagaacatgtggattttcgacgaggacctg
ggactcaataatcgagagatcaccttcgtcccgggcctctacaagatcttcgatgagatt
ctcgtgaacgctgccgacaacaaacagagggacaagaacatgacgtgcatcaagattaca
atcgaaccggagaccaacaccgtgagcgtgtggaacaacgggaagggcatccccgtggtg
gagcacaaggtggagaagatgttcgtcccagcgctgatcttcggcgagctcctcacctcc
agcaactacaatgacgaagagaggaaggtcacaggtgggaggaacggctacggcgcaaag
ctctgcaacatcttcagcaagaagttcacggtggagacggcctgcaaggagtccaagaag
cagttcaagcagacgtggaccgagaacatgggcaagtcgagcgactccaagatccgctat
ttcgacggcagcgacttcacgtgcgtgaccttccagcccgaccttgacaagttcggcatg
agcagcctggacaaggacatcgtggcgctgatgacgcgccgcgcctacgacatcgccggc
tcgtgcaagggcgtcaaggtgttcctcaatggcaagaagctgcccgtgaccggctttcgc
agctacgtggacatgtacatgaaggacaaggtggacgagacgggcaacatactcaaggtg
gtgcacgaggtggtgggcgagcgctgggaggtttgtctcaccgctagcgacaagggcttc
cagcaagtcagcttcgtcaacagcatcgccaccaccaagggcggccgccacgtcgactac
gtggccgaccaggttgtcgctaaactcatcgaggtcgtcaagaaaaagaacaaggctggg
gtgcttgtgaagcccttccaggttaagaaccacatctggctttttgtgaactgcctggtg
gagaatccgaccttcgactcccagaccaaggagaacatgactctgcagcacaagcgtttt
ggctcgacgtgccaactctcggagaagttcaccaaggcggccaccaactgcggcatagtg
gagagcatcctgaactgggtgaagttcaaggctcagactcagctcaacaagaagtgctcc
tccgtgaagcactccaagctgcggggcatccccaaactggatgacgccaacgatgccgga
gggcgcaactcccagagctgcacgctcatcctgacagagggcgactcggccaagactctg
gccgtgtcggggctgagtgtggttgggcgcgaccgctacggagtcttccccctgcgcggc
aagatgctcaacgtccgcgaagcgtcgcacaaacagatcatggagaaccaggagatcaac
agcatcatcaagatcatgggcctgcagtacaagaagagctatgaggatgccgagtccctg
cgctcgctccgctacggcaagctcatgatcatgaccgatcaggaccaggacggctcccac
ataaaggggctcctcatcaacttcatccatcacaactggccctcgctgctcaagcaccac
ttcctggaggagttcatcacgccgctggtcaaggtgaccaaaaacaagcaggagctgccc
ttctacagcctgcctgagttcgaggagtggaagaagggctcggagctcaacaagacctgg
agagtgaagtactacaaaggtctgggcacgagcacggcgaaggaggcgaaggaatatttt
gcggagatggagcggcaccgcatccccttccgctacatcggcaccgaggatgacaacgcc
atcactctggcgttcagcaagaagaaagtcgacgaccgtaaagagtggctcaccaactgg
atggaggatcgcaggcagaggcggttgcacgggctgcccgagcaattcctgtacggcaag
gagaccaagtacctgacctacaacgacttcatcaacaaggagctcatcctcttctccaac
tccgacaacgagcgctccatcccttcgctggttgacgggttaaaacccgggcagaggaag
gtcctcttcacctgcttcaagcgcaacgacaagcgcgaggtgaaggtggcgcagctcgcc
ggctctgtggccgagatgtcggcttaccatcacggagagcaatcgctgatgatgaccatc
atcaacctggcgcaaaacttcgtgggcagcaacaacgtgaacctcctgcagcccatcggg
cagttcggcactcgcctccacggtggcaaggacgccgccagcccccgttacatcttcacc
atgctcagcccgctggcacgcatgctgtacccggccgtggacgacaacctgctgcgcttc
ctgtgggatgacaaccagcgcgtggagcccgagtggtattgccccatcatcccgctggtg
ctggtgaacggcgccgacggcatcggcacgggctgggcctcgaggatcctcaactacgac
acgcgggagatcgtcaacaacatccggcgcatgctcgacggagaagaacccctgctcatg
ggtcccaggtacaagaacttcaagggcaccatcgatgaactgggtcccaaccagtacctg
atgagcggggaggtggccgtgctggactccaccacggtggagatcacggagcttcctgtg
cgcacttggacacaggcatacaaggagacggtcctggagcccatgctgacgggcacagac
aagacgccgccgctgatctccgactacaaggagtaccacacggacaccaccgtcaagttc
gtgatcaggatgagcgaggagaagctcacgcaggccgaagccaccgggctccacaaggtc
ttcaagctgcagagctcagccacctgcaactccatggttctctttgaccacatgggctgc
ctgcggaagtacgagtccgtggccgacatcctgcgcgagttctacgagctgcgcatcaag
tactacagcctgcgcaaggagtggctggagggcatgctccacgccgagtcctccaagctc
aacaaccaggcgcgcttcatcctcgagaagatcgagggcaagatcaccatcgaaaacaaa
ccaaagaaagagctcatccagatgttgctgaagcgcggctacgactcggaccccatcaag
aactggaaagacgcccaggagaaggctgtggacggcggcggcggtggtgctgacagcgac
agcgacgcctctgacgcggccggaggcactggccccaacttcaattacatcctcaacatg
ccgctgtggagcctgtcgcgtgaacgcaaggacgagctcgtgaagcagcgtgacatcaag
gccaaggagctgttggagctgaagcggaagagtccctcggagctgtggaaggaggacctg
gccaccttcgtggaggagctggaccgagtggaggcccaggagcgcgaggaagaggtgagc
agcatgtccaccaaggccgtcaagggcaaggtgggcaagcccaagatgaagcgcctgcag
ctggaggagacgcagccgtccctgcacggccgccgcgttgtgccgcaggtcacgctggcc
atgaaggccgaggccagcaagaagttgggccgcaaaaaggtcaagacggagggcgtcgat
ggaacgccggtcaagatggaacctggcgaggacggtggcggcggtggcggcggtggcgaa
gactctgagtcccagccgctcgtccggcgaaccgccaagcgggctcccaaaacggacaag
tccgagcctggcagtaagtcggcgcgcaagggaacggcgtccaagaagcccaagaggaac
ccgtggtcggactcggacgggagcgatgacctggaagacaaatccgtcagcgatgcggac
gacatgagcattggcctcgtgccgcgggagaacgtcccacgccgggctgccgcgatgaag
cccaagaagttcacgtttgatttctcggacggggatgacgaagacgacgacgaggtggtg
agcagccccccgcggagggtccgctccaagtcccccccaagccccgtggccaagaagaag
acctcctccttcgacttctctgacaaggaggatgaggacgacgtcgctctgcctccacct
cctccgccgaccaaggccaaagaggccgtcgataagcgggcgccggagcctcgcaagggc
tggaagtcgacggagttcgactgggacgaggtgatgggcaccccctctcacccgccgcag
gcgcccgccgcttccgccacgaccagcagccccgccaagcccgcgttgagcagcgacgac
gagaaacctgcgagcgcggccagccccctcgtctcgtcgcacgcctccaccaagccgccc
gccgccgccaccttccccgccaagaagccagccgcgtcgaaaaaacagtccccggccgcc
aaagacggggacaaagccaagaagaagcccagcgccaagtccaagaagccgctgagcatg
gactcggacaacgacagcgacgaggtcgcctcctcgcgcaagccggcgccggccgccaag
ggcaagggtggcggcagcaggaagaggaaggtggctgcctccgactcggagaagtctgac
ggggagtacagcccgcagaagaaggtgacggccaaggccgccaccgccctctccgcggcg
actggcaaggccggcagaggggccgccggaggcagcaagaagggcaagaaggcggtcgtg
tcggacgacgagggctcggcaggcgtggacagcgacgacggggtaggggccggggccaag
ggagcgggggccggagccaaggggggcggctcatcgaggggcgcccagcagagggagcgc
ccggggcgcgcgcgcaagcaggtgaagtactgcgaggcctcggacgacgacgacaacgac
gatgacttcttgggctga
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integrated database retrieval system
