Petromyzon marinus (sea lamprey): 116954900
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Entry
116954900 CDS
T09614
Name
(RefSeq) uncharacterized protein LOC116954900
KO
K06842
semaphorin 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
116954900
NCBI-ProteinID:
XP_032831604
UniProt:
A0AAJ7XEC1
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Position
57:complement(1343562..1512255)
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AA seq
1229 aa
AA seq
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MSRPAMRVALCVFAGVAIIASSAAATATASFPDDATPINIVDAKYTSQYPVLLGPRPKNE
TRRHKLSFQMMVMTNSTLFIAARDHVYHVDLDNAHGEEIPSEKTLTWKSKATDKDICTMK
GKQKEECHNFIKVLLPRDDGTIFVCGTNAFNPMCRIYRLHGERQDAADGAGVARMEGDEI
NGMAKCPYDSKHSNVALFSGGKLYSATVTDFLASDAVIYRSLGSSPALRTIKYDSKWLKE
PQFVNAVEYGNYIYYFFREMAVEYSTMGKVVFSRVARVCKNDVGGSQRVLERHWTSFLKA
RLNCSVPGEPRFYFNVLRAVTGVVTARGRALAVGVFTTPQNSIPGSAVCAFDMVDVEGVF
DGRFKEQRLPDGGWTTVPEDKVPRPRPGCCAGTGSARDVRSSVELPDETLAFIKTHPLVE
DSVPALLHRPGFTKTMVRYRLTKIEVDTEAGPHGNHTVIFLGSEDGVLLKVLSQEGGAWA
GGGGGGGPSGRGAPAEGAAGGAPSGLLLEEIHAYNPHRCNVDGVEDRRIVGLQLDRAHHA
LFVAFPSCIVKVALSRCERHARCKRTCIASRDPYCGWAREGSCARITAPTSVPYEQDIEH
GNSKGLEYCQAEGFVAINGFVSGNHLGSLFSDKSVDVTILALCVVVAFVLGAALSGVTVY
CLCGEGGAGCTSSSSSSSPSSSSSSPHFLSLRCKKAAAAKKLRAAGGGGGGDGGGGDLGS
SYGMETHATLTRLNSYSPGLEPCGKHDGGVAGSPPPCGGGGGGIVPLAGPPTPPLSHATA
IAMATEMMLMMPNGGLGSAGGVGGLGGAEQIQTELAAGLPTPDATPVLPLKNCCNQARRD
CWEQEQNLKNAAGKSATAALLGQHQQQHHNGGHHHPHHAPHHAHHNHHGSHHGHHHNNHG
HHHHHHQHNIQQQPQLQLQQQQQQRHPQQPSIAEMAYVQGLPTSPASGVPHILSEQGPHH
LGNYSHNSGHQREPRGHGGGAMDKLDEVLAFFEEQSLLLKVGASGRDARLPTSCSSSSSS
SSSSSSSSSSSSAAVAVTSVSARNSLLAPPGAKAPLEPQPPPSAGAAGADKKKPRAGVHH
GAGSLQRGLAAPSASRNPKAQAAQPQPPPPPSSDLARGRESPDDDAAPPTPPARVDSVQP
GTAPSPASSSAPSAHAGFALPQPRCFGAAAPQPQHGLLARQSSFSGGGGGALPPVGLMPR
TNAGVKRSHSVKPDVPPKPGAAAKAAPCV
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccccgcgatgcgtgtggcgctctgcgtcttcgccggagtcgccatcatcgcc
tcctccgctgccgccaccgccaccgcctccttccccgatgacgcgacgcccatcaacatc
gttgatgccaaatacacgagccagtaccccgtgctcctgggccccaggccaaagaacgag
acgcggcgacacaagctcagcttccagatgatggtgatgaccaactccaccctcttcatc
gccgccagggaccacgtgtaccacgtggacctggacaacgcgcacggcgaagagatcccc
agcgagaagacgctcacctggaagtcgaaagcaacggacaaggacatctgcaccatgaaa
ggcaaacagaaggaagagtgccacaacttcatcaaggtgcttctcccacgtgacgacggc
accatcttcgtgtgtggcaccaacgccttcaaccccatgtgccgcatctaccggttgcac
ggcgagcggcaggacgcggcggacggagcgggcgtggcgcgcatggagggcgacgagatc
aacggcatggccaagtgtccctacgactccaagcacagcaacgtggcgctcttctctgga
ggcaagctctactccgcgacggtgacggatttcctcgcgagcgacgctgtcatttaccgg
agcttggggagcagccccgctctgcgcaccatcaaatacgactccaaatggctcaaagag
ccgcagtttgtgaacgctgtggagtatggcaactacatctactacttcttccgtgagatg
gctgtggaatacagcaccatgggcaaggtggtcttctcaagggtggcgcgcgtctgcaag
aacgacgtgggaggctcgcagcgcgtgctcgagcgccactggacgtcgttcctcaaggcg
cgtctcaactgctcagtgccaggcgagccgcgtttctacttcaacgtgctgcgcgccgtc
acgggcgtcgtgacggcacgcggcagggcgctcgccgtcggcgtgttcaccacgccgcag
aacagtatccccgggtcggccgtgtgtgccttcgacatggtggacgtggagggagtgttc
gacggacgcttcaaggagcagcggctgcccgacggcggctggaccacggtgcccgaagac
aaggtgcccagacccaggcctggctgctgtgcgggcacgggcagcgctcgtgacgtgcgc
agctcggtggagctgccggacgagacgctggcgttcatcaagacgcaccccctggtggag
gacagcgtgccggccctgctgcaccggcccggcttcaccaagaccatggtccggtaccgc
ctcaccaagatcgaggtggacacggaggccgggccccatggtaaccacacggtgatcttc
ctgggctcggaggacggcgtgctgctcaaggtgctctcccaggagggcggagcctgggcc
ggcgggggcggtgggggggggccgtccgggcggggggctccggcggagggggccgccggc
ggcgccccctcgggcctcctgctggaggagatccacgcctacaacccgcacaggtgtaac
gtggacggtgtggaggaccggcgcatcgtgggcctgcagctggaccgtgcgcaccacgcc
ctcttcgtcgccttcccgtcgtgcatcgtcaaagtggcgctcagccggtgcgagcgccac
gcacggtgcaagcgaacctgcattgcgtcacgtgacccgtactgcggctgggctcgcgag
gggtcgtgcgcccgcatcaccgcccccaccagcgttccgtacgaacaggacatcgaacac
ggcaactccaaggggctcgagtactgccaagccgaaggcttcgtggcaataaatggcttc
gtgagcggcaaccacctaggctcgctcttctcggacaagtccgtggacgtgaccatcctg
gcgctctgcgtcgtggtggccttcgtgctgggtgcggcgctgtcgggcgtcaccgtctac
tgcctctgcggcgaaggcggcgccggctgcacctcctcatcctcctcgtcgtcgccctcc
tcctcctcgtcgtccccgcacttcctctccctccgctgcaagaaggcggccgcggccaag
aagctccgagcggccggcggcggcggcggcggcgacggcggcggcggagacctcggctcg
tcgtacggcatggagacccacgccacgctcacgcggctcaacagctacagccccgggctg
gagccgtgcggcaaacacgacggcggcgtcgccggatcgccgccgccgtgcggcggcggc
ggcggcggcatcgtgccgctagccgggcctccgacgccgccgctgtcgcacgcgaccgcc
atcgcgatggcgaccgagatgatgctgatgatgcccaacgggggcttgggctcggcgggc
ggcgtcggcgggctcggcggcgcggagcagatccagacggagctggcggccgggctcccg
acgccggacgcgacgccggtgctgccgctcaagaactgctgcaaccaggcccggcgcgac
tgctgggagcaggagcagaacctgaagaacgcggccggcaagagcgccaccgccgcgctg
ctcggccagcaccagcagcagcaccacaacggcggccaccaccaccctcaccacgctcct
caccacgctcaccacaatcaccatggcagccaccacggccaccaccacaacaaccacggg
catcaccaccaccaccaccaacacaacatccagcagcagccgcagctacagctgcagcag
cagcagcagcagcgccacccgcagcaaccgtccatagcggagatggcgtacgtgcagggc
ctccccacgagcccggcgtcgggcgtgccccacatcctgtcggagcagggcccgcaccac
ctcggcaactacagccacaacagcgggcaccagcgcgagcccaggggacacggaggaggc
gccatggacaagctggacgaggtgctggccttcttcgaggagcagtcgctgctgctcaag
gtgggcgccagcggccgcgacgcccgcctgcccacgtcctgctcctcctcgtcctcctcg
tcgtcctcctcgtcatcctcctcgtcgtcgtcttcggccgcggtcgcggtgacgtcggtg
tcggcgcgcaacagcctgctggcgccgccgggcgcgaaggcgccgctcgagccgcagccg
ccgccgtccgccggcgccgccggcgccgacaagaagaagccacgcgccggcgttcatcac
ggcgccggctcgctgcagcgcggcctcgccgccccctccgcctcccgcaaccccaaggca
caggcggcgcagccgcagccgccgccgccgccgtcgtcggacctggccaggggccgggag
tctcccgacgacgacgccgcccccccgaccccgccggcgcgggtcgactcggtgcagccg
ggcacggcgccgtcgccggcgtcgtcgtcggcgccgtcggcgcacgccggcttcgcgctg
ccgcagccgcgctgcttcggcgccgccgcgccccagccgcagcacggcctcctggcgcgc
cagtcgagcttctccggcggcggcggcggcgcgctgccgccggtcggcctgatgccgcgc
accaacgcgggcgtgaagcgctcccactccgtgaagccggacgtgccgcccaagcccggg
gcggcggcgaaggcggcgccctgcgtttga
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