Petromyzon marinus (sea lamprey): 116954939
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Entry
116954939 CDS
T09614
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pmrn01100
Metabolic pathways
Module
pmrn_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116954939
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmrn01003
]
116954939
Enzymes [BR:
pmrn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
116954939
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
116954939
Glycosyltransferases [BR:
pmrn01003
]
Glycan extension
O-Glycan
116954939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
116954939
NCBI-ProteinID:
XP_032831683
UniProt:
A0AAJ7XFU0
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All DBs
Position
57:5542956..5561973
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AA seq
926 aa
AA seq
DB search
MKAPCPRGLRAFLSSLAGFALGFSAATWLFSPWAAQRSATAGAGGVSTGGHCWWQGGFGR
GGALLMGAGRSGASSFSFAFSFPFSSSSSTSREETEWGGARTRSFVYVGVITAHKYLSTR
AWAAYRTWAPTVPGRVEFFTSDGSSSELPLPLVALPGVDDVYPPQKKSFMMLKYMHDHYL
DQFEWFVRADDDAYIRGDRLEQFLRRLNSSEPHYLGQTGLGTTEELGKLALEPGENFCMG
GPGMVFSREALRRLAPNVGPCLREMHTGHEDVEVGRCVRRFADTQCVWSYEMQQLFYEHY
ERNKRGYIQDLPASKLHRAITLHPNKRPAYQYRLHSLLLASRAQELRHKTIELHRQILQT
ATEAQQLLANGGGDDEANAALDVSSEDRRLGASPSFMRFHPRDRQHVLEWDFFTGTHLWS
ARAGAQGPRQALSGGALRSALDGTVVAQLMEMIDARARARRRAIDFREILYGYARVNPLH
GADYVLDVLMTYRRSEGKRAAVPVRRHAYLQQTFGRAEFAEEREMQAAEFAAAVDASAAA
AAAAASADGGGGGGIAGGNAGDGSLLAVKLSNPLGLFAPFGRTPVEAVLAAAGPSRERIH
MLVPLAGRYKAFVRFMENFERVCLARPQNIKLVLLLFRPSSDDGGGAGDGDAVGRPEALV
EEYRRRYPKAEIEVLSVTGPFSRGLALEVGSSQFPGDALLFFCDVDLAFTADALQRCRDN
AGRVDPTTGSVSDDGRVGQVYFPVIFSQYDPRIVHSGGGRSPTSDDSDGRHEDDPFDFSD
RAGMWRAFGYGIACLHRADLARAGGFDTSITGWGLEDVDLFGKAVAARAGGGAGGGLAVF
RSPDPGVAHLHHEVRCDPALEPRQLRMCRNSKASTLGSARQLAHTWLAHAEAAAVAAAGE
DEGGGRGPGRLGPTATDVGGDGAASR
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccccgtgtccgcggggcctgcgggctttcctaagcagcctggccgggttcgcg
ctcggcttctcggcggccacttggctcttctcgccctgggcagcgcagcgatccgccacc
gctggcgccggcggcgtttccaccggcggtcactgctggtggcagggcggcttcgggcga
ggcggagcgctactgatgggcgccgggaggagcggcgcgtcgtcattctcgttcgccttc
tccttccccttctcgtcgtcctcatccacctcccgggaggagacggagtggggtggagcg
cggacccgcagcttcgtctacgtcggggtcatcacggcgcacaagtacctgtccacacgc
gcctgggccgcctatcgaacctgggcccccacggtgcccggccgcgtggagttcttcacg
agcgacggctccagctccgagctgcccctgccgctcgtggcgttacccggcgtggacgac
gtatacccgccgcagaagaagtccttcatgatgctgaagtacatgcacgaccactacctg
gaccaattcgagtggttcgtgcgcgccgacgacgacgcctacattcgcggggatcgcctc
gagcagttcctgcgccgcctcaacagcagcgagccgcactacctgggccagacggggctg
ggcaccaccgaggagctgggcaagctggcgctggagcccggcgagaacttctgcatgggc
ggcccgggaatggtgttcagccgggaggcgctcaggaggctggcgcccaatgtggggccg
tgcctgcgcgagatgcacacggggcacgaggacgtggaggtggggcggtgcgtgcggagg
ttcgccgacacgcagtgcgtgtggtcctacgagatgcagcagctgttctacgagcactac
gagcgcaacaagcgtggctacatccaagaccttccggcgagcaaactgcaccgcgccatc
accctgcaccccaacaagcgccccgcgtaccagtaccgcctgcactcgctgctgctcgct
tcacgcgcgcaagagctgcgccacaagaccatcgagctgcaccggcagattctgcagact
gcgacggaggctcagcagctgctcgctaacggcggcggcgacgacgaagccaacgccgcc
ttggacgtgtcgtcagaggaccggcgccttggcgcctcgccctccttcatgcgcttccac
cctcgcgaccgccagcatgtgctcgagtgggacttcttcaccggcacgcacctgtggtca
gcgcgcgccggcgcccagggcccccgccaagccctgagcggcggcgccctccgctcggcg
cttgacggcaccgtcgtggcccagctcatggaaatgatcgacgcccgcgctagggcgcgc
cggcgagccatcgatttccgcgagatcctgtacggctacgcgcgcgtcaacccgctgcac
ggcgccgactacgtgctggacgtcctcatgacgtaccgccgcagcgagggcaagcgcgcc
gccgtgccggtgcgccgccacgcctacctgcagcagacgttcggccgcgccgaattcgcc
gaggagcgcgagatgcaagctgccgagttcgccgcggccgtggacgctagcgccgccgcc
gcagctgccgccgcttcggctgacggcggcggcggcggcggtatcgccggcggtaatgcc
ggcgacggttcgttgctggcggtgaagctatcgaacccactcgggctcttcgcgccgttc
ggccgcacccccgttgaggcggtgctggcggccgccgggcccagccgggagaggatccac
atgctggtgccgctggccgggcggtacaaggcgttcgtcaggttcatggagaactttgag
cgcgtgtgcctggctcgcccgcagaacatcaagctggtgctgctgctgtttcgcccttcg
agcgacgacggcggcggtgccggcgacggggacgcggtgggaagacccgaggcgctggta
gaggagtaccgccggcgctacccgaaggcggagatagaggtgctgagcgtgaccgggcct
ttctcgcgaggcctggctctggaggtggggtcttcgcagtttcccggcgatgccctcctc
ttcttctgcgacgttgacctggcattcacagccgacgccctgcagcgctgccgggacaac
gccggtcgcgtcgatcccaccaccggcagcgtgagcgacgacgggagggttggccaagtc
tacttccccgtcatcttcagccagtacgatccgcgcatcgtccactctggtggcggccgt
tcgcccacgagtgacgacagcgacggccgccacgaggacgaccccttcgacttctccgat
cgcgccggaatgtggcgcgcgttcggctatggcatcgcctgcctgcatcgcgccgacctg
gcccgtgccggcggtttcgacacatcaattacgggctgggggctcgaggacgtcgacttg
ttcggcaaggcggtggcggctcgtgccggtggcggtgccggtggcgggctagccgtgttc
cgcagcccggaccccggcgtggctcacctccaccacgaggtgcggtgcgacccggcgttg
gagccgaggcagctgcgcatgtgccgcaactcgaaggcgtcgacgttgggatcggcgagg
cagctggcgcacacgtggctggcgcacgccgaagccgccgccgtcgccgccgccggggaa
gacgaaggagggggacgggggccggggaggttgggccccacagccaccgacgttggcggc
gacggtgccgcgagtcggtaa
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