Petromyzon marinus (sea lamprey): 116954944
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Entry
116954944 CDS
T09614
Symbol
HARS1
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116954944 (HARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmrn01007
]
116954944 (HARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116954944 (HARS1)
Enzymes [BR:
pmrn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
116954944 (HARS1)
Amino acid related enzymes [BR:
pmrn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
116954944 (HARS1)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116954944 (HARS1)
Prokaryotic type
116954944 (HARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2d
HHH_3
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
116954944
NCBI-ProteinID:
XP_032831696
UniProt:
A0AAJ7XEP9
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All DBs
Position
3:15340715..15357694
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AA seq
513 aa
AA seq
DB search
MADSCEEKKAAVADAVKAQGEVVRRLKAEKASGQTISEEVKKLLSLKEQLGLEEGKHTFV
LKTPKGTRDYGPRQMAIREAAFKVIVDTFKRHGAETIDTPVFELKETLTGKYGEDSKLIY
DLKDQGGELLSLRYDLTVPFARYLAMNKVTNIKRYHVGKVYRRDNPAMTRGRYREFYQCD
FDIAGQYDPMIPDAECLKIVHEILTELNIGDFIIKVNDRRILDGMFEACGVPSEKFRTIC
SSVDKLDKTPWSDVRAEMVGEKGLDPEVADRIGQYVQKHGGQALVEELLQDSVLGPNAAC
KAGLTDMRLLLGFLQIMGITQQVRFDLSLARGLDYYTGVIYEAVLLSGGDPQTGEEGGEG
GVGSVAGGGRYDGLVGMFDPRGRRVPCVGVSLGIERIFSILEAKQTDVRTTETQVLVASA
QKDLLEERLKLITELWGAGIKAEMSYKRNPKLLSQLQVCEEMKIPFVCIVGHAELEAGVV
KLRTVLTRNEDSIPRDQLIEEIRKRTWCSPSPQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagctgcgaggagaagaaggccgcggtggcggacgccgtgaaggcgcagggc
gaggtggtgcggaggctcaaggcggagaaggcgagcggccagacgatttcagaagaagta
aaaaaacttctctccctgaaggagcagctgggcctggaggaaggaaagcacacatttgtg
ctcaaaaccccaaagggaacgcgggactatgggccccgccaaatggccatccgtgaagca
gccttcaaggtcatcgtggacaccttcaaacgccatggggctgagaccatcgacacaccc
gtttttgagctcaaggagacccttacgggaaagtacggagaagactcgaagttgatttat
gatctcaaggatcagggaggggaactactttctctgcgatacgacctaactgtcccgttt
gcccgttacctggccatgaacaaggtgacgaacatcaagcgctaccatgtgggcaaggtg
tatcgccgtgacaacccggccatgacgcgtggacgctaccgcgagttctaccagtgtgat
tttgatattgctggacaatacgaccctatgattccggatgccgaatgcctgaagatcgtc
catgaaatcctgacagagctcaatattggtgacttcattatcaaggtgaatgatcggcgc
atcctggacgggatgttcgaggcgtgtggcgtgccctctgagaagttccgcaccatctgc
tcgtccgtcgacaagctggacaagaccccgtggagtgacgtgcgagccgagatggtcggg
gagaaggggctcgacccggaggtggccgatcgcattgggcagtacgtccagaagcacggt
ggccaggccctggtggaggagctgctgcaggactccgtgttgggccccaatgccgcctgc
aaggccggcttgactgacatgcgcctgctgctgggcttcctgcagatcatgggcatcacg
cagcaggtgagatttgacctgagcctggcgcgaggacttgactattacacgggcgtgatc
tacgaggccgtgctgctgagcggaggtgacccccagaccggggaggaagggggcgagggg
ggcgtgggcagtgtggccgggggggggcgctacgacggccttgtggggatgtttgacccc
cgggggcggcgcgtgccctgcgtgggcgtctccctcggaatcgagcgcatcttctccatc
ctcgaggcgaagcaaacagatgtgcgcacgaccgagacgcaggtgctggtggcgtcggca
cagaaggatttgctggaggaacggctcaagctcatcacggagctgtggggtgccggcatc
aaggcggagatgtcctacaagcggaaccccaagctgctgtctcagctgcaggtctgcgag
gagatgaaaatccccttcgtctgcatcgtcggccatgccgagttggaggctggggtcgtg
aaactccgcactgtgctcacccgcaatgaggattccattccacgggaccaactgattgag
gaaattcgaaaacgcacatggtgttcaccatcgccacaataa
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