KEGG   Petromyzon marinus (sea lamprey): 116954951
Entry
116954951         CDS       T09614                                 
Name
(RefSeq) ubiquilin-1-like isoform X1
  KO
K04523  ubiquilin
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116954951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmrn04131]
    116954951
   03051 Proteasome [BR:pmrn03051]
    116954951
Membrane trafficking [BR:pmrn04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    116954951
Proteasome [BR:pmrn03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    116954951
SSDB
Motif
Pfam: UBQLN1 ubiquitin UBA STI1-HOP_DP Rad60-SLD YukD UBA_7 Ubiquitin_5 UBA_NBR1_C Rad60-SLD_2 Ubiquitin_USP47_N DUF1103 UBA_HOIP CUE Dsc3_N
Other DBs
NCBI-GeneID: 116954951
NCBI-ProteinID: XP_032831714
UniProt: A0AAJ7U8K0
LinkDB
Position
57:complement(4748113..4773962)
AA seq 624 aa
MAEGDKIRVTVKTPKDKEDFVIAASSTVKEFKEEISKRFKAQPDQLVLIFAGKILKDPDS
LSQNGVKDGLTVHLVIKTQGRSQEPASQSAPTSSGASTTPTSTGSSSSSSTTAPPPTQPL
PGLPPFFLGGNLGGLASLSNLGVGSSNFMEMQQQMQRQLMSNPELLSQVMENPFVQTMIS
NPEMMRQLIMTNPQMQQLMERNPEITHMLNNPELLRQTMELARNPAMMQEMMRNQDRALS
NLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLLSGPGGNAGSGGTGGTAPGGG
NAEGQPSRTENREPLPNPWGPALSPRPGSASPASPLLQQQTPGATPSVSNPLGIHPAMLV
IPGGVMRQVAANPQLMQNMMSAPYMPAMLQALALNPSLAEQVFLTSPIFEGNPQLREHMR
TQLPVFLQQMQNPDVMSAIANPRAMMALMQIQQGLQVLANEVPGLMPGLVPGSFDGVGGA
ALSTPGGGAQPESAAAPASGTATDGGTATTAAAGGTAGGGGTLGGSGTWGGGGTGGVGTA
AAGLGLGQAPTPAQQEFMQQMLQALAGMGSSQPLGGAIVSPEVRFRSQLDQLQAMGFVNR
DANLQALIATGGDINAAIERLLGS
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggcggagggcgacaagatccgcgtgacggtgaagacgcccaaggacaaggaggacttc
gtgatcgccgcctcgtccaccgtgaaggagttcaaggaggagatctcgaagcgattcaag
gctcagcccgatcagctggtgctcatcttcgcggggaagatcctcaaggatccggactcg
ctgagccagaacggtgtgaaggacggtctcacagttcacttggtcatcaagacgcagggc
agatcacaggagccggcatcacagtcggcgccaacctcctcgggtgccagcaccacaccc
acctccacaggctccagcagcagcagcagcaccaccgcaccaccccccacacagccgctt
cccggcctgccgccattcttcctcggggggaacctcggtggtctcgccagcctcagtaac
ctcggcgtcggctcttccaacttcatggagatgcagcagcagatgcagcgccagctcatg
tccaaccccgagctgctcagccaggtcatggagaacccctttgtgcagacgatgatcagc
aacccagagatgatgaggcagctcatcatgaccaacccacagatgcagcagctgatggag
cgcaaccccgagatcacgcacatgctcaacaaccccgagctgctgcggcagacgatggaa
ctggcgcgcaacccggccatgatgcaggagatgatgcgaaaccaggaccgcgcgctcagc
aacctggaaagcatccccggcgggtacaacgcgctgcgccgtatgtacaccgacatccag
gagcccatgctgagcgccgcgcaggagcagttcggagggaacccgttcgcctcgctgctc
agcggccccggcggcaacgcgggctcgggagggacgggcggcacggcgccaggcggcggc
aacgccgaggggcaaccgtcgcgcaccgagaaccgcgagccgctgcccaacccgtggggt
ccggcgctgtcgccacgacccggctccgcctcgcccgcctcgccgctcctccagcagcag
acgcccggcgcgacgcccagcgtctccaacccgctgggcatccatcccgcgatgctggtg
atcccaggaggcgtgatgaggcaggttgcggcgaacccccagctcatgcagaacatgatg
tcggcgccgtacatgcccgcgatgctgcaggcgctcgccctgaacccctcgctcgctgag
caggtgttcctgacaagccccatcttcgaagggaacccgcagctcagagagcatatgagg
acgcagctccccgtgttcctacagcagatgcagaacccggacgtgatgtcggccatcgcg
aacccgcgcgccatgatggcgctcatgcagatccagcaggggctacaggtcctcgccaac
gaggttccaggcctcatgccggggctggtgccgggcagctttgacggcgtcggtggggcg
gcactgtccaccccggggggtggtgcccagccagagtcggcggcagcgccggcgagcggg
acggcgacagacggaggcacggccacgaccgccgccgccggcggaacggcgggcgggggc
ggaacgttggggggcagcggaacgtggggggggggaggcacgggtggcgttggaacggcg
gcggcgggcctgggcttggggcaggctcccaccccggcgcagcaggagttcatgcagcag
atgctgcaggcactcgcggggatgggcagctcgcagccactagggggtgccatcgtgagc
cccgaggtgcggttccgctcgcagctggaccaactgcaggccatgggcttcgtgaaccgg
gacgcgaacctgcaggcgctgatagcgacgggcggagatatcaacgccgccatagagcgg
ctcctgggctcctag

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