Petromyzon marinus (sea lamprey): 116954951
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Entry
116954951 CDS
T09614
Name
(RefSeq) ubiquilin-1-like isoform X1
KO
K04523
ubiquilin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116954951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116954951
03051 Proteasome [BR:
pmrn03051
]
116954951
Membrane trafficking [BR:
pmrn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
116954951
Proteasome [BR:
pmrn03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
116954951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
STI1-HOP_DP
Rad60-SLD
YukD
UBA_7
Ubiquitin_5
UBA_NBR1_C
Rad60-SLD_2
Ubiquitin_USP47_N
DUF1103
UBA_HOIP
CUE
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
116954951
NCBI-ProteinID:
XP_032831714
UniProt:
A0AAJ7U8K0
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Position
57:complement(4748113..4773962)
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AA seq
624 aa
AA seq
DB search
MAEGDKIRVTVKTPKDKEDFVIAASSTVKEFKEEISKRFKAQPDQLVLIFAGKILKDPDS
LSQNGVKDGLTVHLVIKTQGRSQEPASQSAPTSSGASTTPTSTGSSSSSSTTAPPPTQPL
PGLPPFFLGGNLGGLASLSNLGVGSSNFMEMQQQMQRQLMSNPELLSQVMENPFVQTMIS
NPEMMRQLIMTNPQMQQLMERNPEITHMLNNPELLRQTMELARNPAMMQEMMRNQDRALS
NLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLLSGPGGNAGSGGTGGTAPGGG
NAEGQPSRTENREPLPNPWGPALSPRPGSASPASPLLQQQTPGATPSVSNPLGIHPAMLV
IPGGVMRQVAANPQLMQNMMSAPYMPAMLQALALNPSLAEQVFLTSPIFEGNPQLREHMR
TQLPVFLQQMQNPDVMSAIANPRAMMALMQIQQGLQVLANEVPGLMPGLVPGSFDGVGGA
ALSTPGGGAQPESAAAPASGTATDGGTATTAAAGGTAGGGGTLGGSGTWGGGGTGGVGTA
AAGLGLGQAPTPAQQEFMQQMLQALAGMGSSQPLGGAIVSPEVRFRSQLDQLQAMGFVNR
DANLQALIATGGDINAAIERLLGS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggcgacaagatccgcgtgacggtgaagacgcccaaggacaaggaggacttc
gtgatcgccgcctcgtccaccgtgaaggagttcaaggaggagatctcgaagcgattcaag
gctcagcccgatcagctggtgctcatcttcgcggggaagatcctcaaggatccggactcg
ctgagccagaacggtgtgaaggacggtctcacagttcacttggtcatcaagacgcagggc
agatcacaggagccggcatcacagtcggcgccaacctcctcgggtgccagcaccacaccc
acctccacaggctccagcagcagcagcagcaccaccgcaccaccccccacacagccgctt
cccggcctgccgccattcttcctcggggggaacctcggtggtctcgccagcctcagtaac
ctcggcgtcggctcttccaacttcatggagatgcagcagcagatgcagcgccagctcatg
tccaaccccgagctgctcagccaggtcatggagaacccctttgtgcagacgatgatcagc
aacccagagatgatgaggcagctcatcatgaccaacccacagatgcagcagctgatggag
cgcaaccccgagatcacgcacatgctcaacaaccccgagctgctgcggcagacgatggaa
ctggcgcgcaacccggccatgatgcaggagatgatgcgaaaccaggaccgcgcgctcagc
aacctggaaagcatccccggcgggtacaacgcgctgcgccgtatgtacaccgacatccag
gagcccatgctgagcgccgcgcaggagcagttcggagggaacccgttcgcctcgctgctc
agcggccccggcggcaacgcgggctcgggagggacgggcggcacggcgccaggcggcggc
aacgccgaggggcaaccgtcgcgcaccgagaaccgcgagccgctgcccaacccgtggggt
ccggcgctgtcgccacgacccggctccgcctcgcccgcctcgccgctcctccagcagcag
acgcccggcgcgacgcccagcgtctccaacccgctgggcatccatcccgcgatgctggtg
atcccaggaggcgtgatgaggcaggttgcggcgaacccccagctcatgcagaacatgatg
tcggcgccgtacatgcccgcgatgctgcaggcgctcgccctgaacccctcgctcgctgag
caggtgttcctgacaagccccatcttcgaagggaacccgcagctcagagagcatatgagg
acgcagctccccgtgttcctacagcagatgcagaacccggacgtgatgtcggccatcgcg
aacccgcgcgccatgatggcgctcatgcagatccagcaggggctacaggtcctcgccaac
gaggttccaggcctcatgccggggctggtgccgggcagctttgacggcgtcggtggggcg
gcactgtccaccccggggggtggtgcccagccagagtcggcggcagcgccggcgagcggg
acggcgacagacggaggcacggccacgaccgccgccgccggcggaacggcgggcgggggc
ggaacgttggggggcagcggaacgtggggggggggaggcacgggtggcgttggaacggcg
gcggcgggcctgggcttggggcaggctcccaccccggcgcagcaggagttcatgcagcag
atgctgcaggcactcgcggggatgggcagctcgcagccactagggggtgccatcgtgagc
cccgaggtgcggttccgctcgcagctggaccaactgcaggccatgggcttcgtgaaccgg
gacgcgaacctgcaggcgctgatagcgacgggcggagatatcaacgccgccatagagcgg
ctcctgggctcctag
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