Petromyzon marinus (sea lamprey): 116954952
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Entry
116954952 CDS
T09614
Name
(RefSeq) semaphorin-4C-like
KO
K06521
semaphorin 4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pmrn04090
]
116954952
CD molecules [BR:
pmrn04090
]
Proteins
116954952
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Gene cluster
GFIT
Motif
Pfam:
Sema
Sema4F_C
PSI
SPAR
Motif
Other DBs
NCBI-GeneID:
116954952
NCBI-ProteinID:
XP_032831717
UniProt:
A0AAJ7U8P5
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Position
57:7484664..7508561
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AA seq
725 aa
AA seq
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MTKHHLPVLLLALTVMLPPLLGSEAQEFLAVPRVKISYDELAQEEAMSFRAVPDASALLL
VPQRSALYVGARDAILALDARNVSRELHPAITWKADEQTQDDCRAKVSPAAAVNCYNVVR
TLHLLNDTHLYVCGTYAFRPMCAYVDLNSFSLVASSVGGGPQLVDGKGQCPYSPSQRYAS
TMAGGKLYSGTFYNFLGTEPVVMRNMGPDDPLRSLYKSSWLSEPEFAAAEHVAESEEGGD
EDDKVYLFFTEAAQEFDFYSSKVAVPRVARVCTGDRGGQSFLQRKWTSFVKALLPCSVPG
ENLFFPSVRDAFVLRPKEGWRNVTFYAAFTSTAAGSGAVSAVCSYRMDEVQRVFSGRFKH
QGGADQRWAPYAGALPAQRPGYCPLGWDSQMLPSETLNFVSDHPLMDEAVKAEGGRPWLL
VPGVAYNRLLVVDVAALDGKSWRTLLLGTDAGALHRAVLPESRGDPHLVEELQALGQQEP
VLSMVLTHDQTSVVVAGPAGVVQLSVCRCGRYRACWDCVLARDPCCAWDPQRRLCRRHGG
ETGTGSWLQDVSGGDATTLCSAHPPDVVAVRVALAPLLLLPCSPPSRLARLSWERDSGPA
PGQPLPEAGLLLRQGAPPAPRDLTGTYLCWAEEAGHRRLVANRTVVLAGVVANAGSATVA
AGVLATLLVVAVAVVCLLVCCGGGDGSRRGYSPTRLDNGEQAADAAGIRLQQVPGNNGTV
GETSA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaccacctccccgttctgctcctcgccctcacggtgatgctgccgccgctg
ttggggtcagaggctcaggaatttctcgccgtgccgagagtgaagatatcctacgatgag
ttggcgcaggaggaggcgatgagtttccgcgccgtgcccgacgcgtcggcgctgctgctg
gtgccgcagcgctcggcgctctacgtgggcgcgcgcgacgccatcctcgccctggacgcc
cgcaacgtctcccgcgagctccaccccgccatcacatggaaggccgacgagcagacgcag
gatgactgcagggccaaggtctcccccgccgccgccgtcaactgctacaacgtggtgcgc
accctgcacctgctcaacgacacgcacctgtacgtgtgtggcacctacgccttccggccc
atgtgcgcctacgtggatctgaactccttctccctggtcgccagctccgtgggagggggc
cctcagctggtggatgggaagggtcagtgcccctactcaccctcgcagcgctacgcctcc
accatggccggtgggaagctctactccggcacgttttacaacttcctgggcacggagccc
gtcgtcatgcgcaacatgggccccgacgaccccctgcgctccctctacaagtcctcctgg
ctctccgagcccgagtttgcggcggcggagcatgtggcggagagcgaggagggcggagac
gaggacgacaaggtttacctcttcttcacggaggcggcgcaggagttcgacttctactcc
agcaaagtggcggtgcccagggtggcgcgagtatgcacgggagaccgcggcgggcagagc
ttcctgcagaggaagtggacgtcattcgtgaaggcgcttctcccgtgctcggtgcccggg
gagaacctcttcttcccgtcggttcgcgacgcgttcgtgctgcggccgaaggagggctgg
cgtaacgtcacattctacgccgccttcacctccactgccgcgggcagcggcgccgtctcg
gccgtctgctcgtaccgcatggacgaggtgcagcgcgtcttctccggacgcttcaagcac
cagggaggggccgaccagcggtgggccccctacgcgggggccctgcccgcacaacggccc
ggatactgccccctgggctgggactcgcagatgctgccctccgagacgctcaacttcgtc
tccgaccaccccctgatggatgaggcggtgaaggccgaggggggccggccctggctgctg
gtgccgggagtggcctacaaccggctgctggtggtcgacgtcgcggcgctggacggcaag
agctggaggacgctgctgctgggcacagacgcgggcgcgctgcaccgcgccgtgctgccg
gagtcgcgcggagatcctcacctggtggaggagctgcaggcgctggggcagcaggagcct
gtgctgtccatggtgctgacccacgaccagacctcggtggtcgtggccggccccgcgggg
gtggtgcagctgtccgtgtgtcgctgtggccgctaccgcgcctgctgggactgcgtactg
gcgcgggatccctgctgcgcctgggacccccagcggaggctgtgcaggcgtcacggcggg
gagaccggcaccgggtcgtggctacaggacgtgagtggtggtgacgcgacgacgctctgc
tccgctcacccgccagacgtggtggccgtccgcgtggcgctggcgccgctgctgctgctg
ccctgctcccccccctcccgcctggcgcgcctctcctgggagcgagactccggcccggcc
ccggggcagccgctgcccgaggcgggcctgctgctccgccagggcgcccccccggccccc
cgggatctcacgggcacgtacctgtgctgggccgaggaggccggccaccggcgcctcgtg
gccaaccgcacggtggtcttggcgggcgtggtggcgaacgcgggcagcgcgacggtggcg
gcgggcgttctggccacgctgctggtggtggccgtcgccgtcgtgtgcctgctcgtgtgc
tgcggcggcggcgacggcagccgccgcggctacagcccgacgcggctcgacaacggcgag
caggcggcggacgccgcggggatccggctgcagcaggtgcccgggaacaacggcacggtg
ggcgagacgagcgcgtga
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