Petromyzon marinus (sea lamprey): 116954972
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Entry
116954972 CDS
T09614
Symbol
DCAF12
Name
(RefSeq) DDB1- and CUL4-associated factor 12
KO
K11803
DDB1- and CUL4-associated factor 12
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116954972 (DCAF12)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116954972 (DCAF12)
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GFIT
Motif
Pfam:
Beta-prop_DCAF12
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
116954972
NCBI-ProteinID:
XP_032831758
UniProt:
A0AAJ7XFW4
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All DBs
Position
57:complement(4509890..4524294)
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AA seq
478 aa
AA seq
DB search
MTKRAASRKRKHCADEQSCSEELCPKRSRVRRPPTSLVSFVESRQAGSASGHSGGGGVGN
GLGGYTAQRLPYLLREREYSLGSLNKVFASQWLSHRQVVCGTKCNTLFVLDLVTGRLTKI
PTLRDGGAGVGGAAGIGGAAVGGGGGGVGAEPEHPGCGIHAIEINPSRTLLATGGANPNS
LAVYRLPTLDPVCVGDGGHKDWIFSIAWVSDSFVVTGSRDGSMGLWEVGDEALAAASAKA
AAEEEEQSVPGYCHVGPRALEDIPAHYINPFTCKVRALAFNCSQQELGAVSLDGYFHLWK
TENSLDKIMSRKLAHCRENVCLAYGHEWSVYAVGSQSHVSLLDPRTTQGPRSVNSREKGS
GIRSVSFYEHVITVGTGQGSVLFYDIRAQKFLERAASGGEGSARGSKELKPKYCDVLKLS
TARGWLNHDDTWRDYFSDMDHFPNAAYTHCYDASGTKLFVAGGPLPSGLHGNYAGLWD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacgcgcagctagcaggaagcgtaagcactgcgccgacgagcagtcttgctcg
gaggagttgtgcccgaagcggtcacgcgtgcggaggccacccacttcgcttgtgagcttt
gtggagagccgccaggccggctcggccagcggccactctggcggcggtggagttggcaac
gggctgggcggctacacggcccaacgcctgccgtacctcctgcgcgagcgtgagtacagc
ctgggctccctcaacaaggtgttcgcgtcgcagtggctcagccatcggcaggtggtgtgc
ggaaccaagtgcaacacgctctttgtgctggacctggtgacgggacgcctcaccaagatc
ccgacgctgcgcgatggcggcgccggtgttgggggcgccgctggaatcggcggcgctgcc
gtgggtggaggaggaggaggagttggcgctgaaccggagcacccgggctgcgggattcac
gcgatcgagatcaacccgtctcgcacgctgctcgcgacgggcggcgctaaccccaacagc
ctcgccgtgtaccgcctgcccacgctggaccccgtgtgcgtcggagacggtggacacaag
gactggatcttctccatcgcctgggtcagcgacagcttcgttgtcacaggctcgcgagac
ggctccatgggcctgtgggaggttggcgacgaggcgctggcggcagcgtcggcgaaggcg
gcggcggaggaggaggagcagtccgtccccggctactgccacgtgggccctcgcgcccta
gaggacatcccagctcactacatcaaccccttcacgtgcaaagtgcgcgccctcgccttc
aattgcagccagcaggagcttggagcggtctcgctggacgggtattttcacttgtggaag
accgaaaacagcctggacaagatcatgtcgcggaagctggcgcactgccgagagaacgtg
tgcctggcgtacgggcacgagtggtcggtgtacgccgtgggctcgcaatcgcacgtgtcg
ctgctcgatccgcgcaccacccagggcccgcgctccgtcaactcgcgcgagaagggcagc
ggcatccggtcggtgagcttctacgagcacgtcatcacggtgggcacggggcagggctcc
gtgctcttctacgacatccgcgcgcagaagttcctggagcgggcggcgtctgggggcgag
ggcagcgcccgcggcagcaaggagttgaagcccaagtactgcgacgtgctcaagctgtcg
acggcgcgtggctggctgaaccacgacgacacgtggcgcgactacttctccgacatggac
cacttccccaacgcggcgtacacgcactgctacgacgcgtcaggcaccaagctcttcgtg
gcgggcggcccactgccctctgggctgcacggcaactacgccggcctgtgggactga
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