Petromyzon marinus (sea lamprey): 116955039
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Entry
116955039 CDS
T09614
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116955039
Membrane trafficking [BR:
pmrn04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116955039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
ig
LRR_9
Ig_2
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
116955039
NCBI-ProteinID:
XP_032831874
LinkDB
All DBs
Position
57:complement(680042..683964)
Genome browser
AA seq
665 aa
AA seq
DB search
MLARMRPGRRGSPATLLPLLLVSTALAVTTMVARLGRASGCPARCDCSPHNRSVVCHRRR
LASIPEGIPTETRSLDLSKNRIRALAADDFAAFPLLEEVDVSENVLASIEDGAFNNLPHL
RSLRLRSNRLKLIPLGAFAGLGNLTHLDISDNRVVVLLDLMFADLRSLRSLDVGDNELVY
VSQRAFAGLHSLEHLALERCNLTSVPADALSHLHRLLSLRLRHLGIGAVPPYALRRLSRL
KALEIEHWPLLEALAPNSLYGLNLTRLSVTHCNLTAVPYAALRHLVYLRLLNLSFNPIAA
VEGRLLVDLARLQELHLAGARLATVEARAFHGLGHLRLLNVSGNRLDTLEEAAFQSVANL
AVLRLDDNPLACDCRLLWLLRRRRRLSFDGAQPACAAPDGVRGWEFRNFPDVLLPNYFTC
RRPRILDGDAAPASSSASSAPPPQPSSSSRWRSAVVDEGHSAVFPCRAEGDPPPRVFWLS
PQRAALTARGNGRMLVSPDGALEVRYAQPGDGGVYTCVAANAGGNDTLAVRLAVRGYAGA
DHFLHMARTTPLVDGAARPGHGDNGSWDDDGGGGGSGVGGSDVALPHKRFLLNLQTVLVA
TAMGCCSFLGVVLLCLLLLFVWSRAKGRVKKTFDVGHVPRCNQEGGGGGGGGGGAEPRTF
STRMM
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgaggatgcggccgggccgccgtggctcccctgccacgctgctgccgctgctg
ctcgtctccacggcgctggccgtgaccaccatggtggcgcgcctgggccgcgcctcgggc
tgcccggcacgctgcgattgctccccacacaaccgctcggtggtgtgccaccggcgtcgc
ctcgcctccatccccgagggcatccccacggagacgcgctcgctcgacctcagcaagaac
cgcatccgggcgctcgccgccgacgacttcgccgccttcccgctgctcgaggaggtggac
gtgagcgagaacgtcctggcgagcatcgaggacggcgccttcaacaacctgccgcacctg
cgctcgctgcgtctccgcagcaaccgcctcaagctcatccccctgggcgccttcgccggc
ctcggcaacctcacgcacctcgacatcagcgacaaccgcgtcgtggtcctcctcgacctc
atgttcgccgacctccgcagcctgcgctcgctcgacgtgggcgacaacgagctggtgtac
gtgtcgcagcgcgccttcgccggcctgcacagcctcgagcacctggcgctcgagcgttgc
aacctgacgtcggtgcccgccgacgcgctgtcccacctgcaccgactgctgtcgctgcgt
ctgcgccacctcggcatcggcgccgtgccgccgtacgccctgcgccgcctctcgcgcctc
aaggcgctcgagatcgagcactggcccctgctcgaggcgctggcgcccaacagcctctac
gggctcaacctgacgcgcctctccgtgacgcactgcaacctgacggccgtgccgtacgcg
gcgctgcgccacctcgtctacctgcgcctcctcaacctctccttcaaccccatcgcggcc
gtcgagggccgcctgctcgtcgacctggcgcgcctccaggagctgcacctggcgggcgcg
cgcctcgccaccgtcgaggcccgcgccttccacggcctcggccacctgcggctgctcaac
gtgtcgggcaaccgcctcgacacactcgaggaggccgccttccagtcggtggccaacctc
gccgtgctgcgcctcgacgacaacccgctcgcctgcgactgccgactgctgtggctgctg
cgccggcgacggcgcctgagcttcgacggcgcgcagccggcgtgcgccgcgcccgacggc
gtccgcggctgggagttccgcaacttccccgacgtcctcctgcccaactacttcacctgc
cgacggccgcggatcctcgacggggacgccgcgccggcgtcgtcgtccgcgtcctcggcg
ccgccgccgcagccgtcgtcgtcgtcgcgctggaggagcgccgtggtggacgagggccac
agcgccgtgttcccgtgccgcgccgagggtgacccgccgcccagggtcttctggctgtcg
ccgcagagggccgcgctgacggcgcggggcaacgggcgcatgctcgtgtcgcccgacggc
gctctcgaggtgcgctacgcgcagccgggcgacggcggcgtgtacacgtgcgtggcggcc
aacgcgggcggcaacgacaccctggcggtgcgcctcgccgtgcgcggctacgcgggcgcc
gaccacttcctgcacatggccaggacgacgccgctcgtggacggcgcggccaggccgggc
cacggcgacaacggcagctgggacgacgacggcggcggcggcggcagcggcgtcggaggg
agcgacgtggcgctgcctcacaagaggttcctgctcaatctgcagacggtactcgtggcc
acggccatgggatgctgctccttcctgggcgtcgtgctgctctgcctgctgctcctgttc
gtctggagccgcgccaaggggcgcgtgaagaagaccttcgacgtgggacacgtgccgcgg
tgcaaccaagaaggcggcggcggcggcggcggcggcggtggcgccgagccgaggacattc
agcacccgaatgatgtag
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