Petromyzon marinus (sea lamprey): 116955081
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Entry
116955081 CDS
T09614
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
pmrn
Petromyzon marinus (sea lamprey)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
SNCAIP_SNCA_bd
Ank
Ank_5
Ank_3
23S_rRNA_IVP
KELK
Motif
Other DBs
NCBI-GeneID:
116955081
NCBI-ProteinID:
XP_032831977
UniProt:
A0AAJ7XEW5
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Position
1:complement(18183100..18405106)
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AA seq
972 aa
AA seq
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MDSPEYLDLDAIDFSEEGISDAASVCDSSSGRPCGELGSPSNSSVLGGSLHKLNPAVPGM
FLESKYRPVKRVPPLTHQPPETGPALPLKPQHPVSAGHSSSSLLKPQHPVVTGSVSSPLK
KHASQQPGAVQPKVLAQIGHDAQLGMSMGKQGGSTLFADAKVDQSKATDIGVKMGLIGSP
ERQSKARASPYSFQFLWKSLGELEHYDLELDEILDVPYANYQSAAMDTGEERKPEPQCKL
DRAQSSGLCLSATEAQWDPVNGKTVTSQSHTAPQTKADVHTSSDENGKGKDRQGCTQPHE
IDVHEQDLLEATTTGLTVGSPSGGAFKCPEAEVISQTLPRVLNSISECAEGEEERGAACQ
SVAKDHAARGAMGIEVLMPQPEEMTKARSIITAIAEGHVSLLRKQLSESAERIRDEGANN
VLHMAAASGQLECLQYLASALPEDGLLERNAEGLTPTATAIKNGHLESVMWLVSETEAGA
ELSVSVERPALIHFAARFGQERILVWLLQYMQEEGVSLDGLDPDGNSAAHVAAREGHLAC
LQTLVEYGASVTTLNKVGQKPLQCAEKHRHPTCARYLVVVETCMSLASQVVKLTKQLREK
TSEIVKLQSQLQVLTGGQASASIPDKVHPARWSGSSPDYSRSSGSSPESTQLSSVGRSAS
QELVNAKPIGSQTGGHGSHLPPKAGQGLFQGAEDTDTVLRNLLGEEISGQMLKDEKLSLE
FPDKDKKRFIQRQLHNRKAAGPGAGRPGYVGGSPSDGRPSSSSSTDSSSPVNQQRPRPRP
IVEKGENLHFVLKKHAFDGGRAQSSSSPDSAGQGSDPGAWSAPKMSRSVSLDSGTAQTEG
GSSSSASTPELRSPKSERRCSPKSALKSPTSRGKSLSGTKLRVTFEEPLVHVAPPPEPTQ
PSAEPSADGGSGPRAGGSPSRPANNIYSVSACRMLDQSKCSGTQSCESAHEEVNRMKAGT
DKGPAEAQEFFL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacagcccggagtatttggacttggatgccatcgacttcagcgaggaggggatttcg
gatgccgcctcagtctgcgacagctcctcaggaagaccctgtggggaactcggctcccca
agcaacagcagtgttttgggtggttcgcttcacaagctcaacccagccgtgcctggaatg
ttcttggaaagcaaataccggcccgtgaaacgcgtgccccctctcacccaccagccaccg
gaaactggcccagctttgcctctcaagcctcagcatcctgtctcagcagggcacagtagc
tcgtcactcctcaaacctcaacatccagtggtgactgggagtgtatcaagccctctgaaa
aagcacgcatcacagcagccaggggctgtgcagcctaaagtcctggcccaaattgggcac
gatgcacagctgggtatgagcatgggcaagcagggtggctcaaccttgtttgcggatgcc
aaagtggaccaaagcaaagccacggacattggtgtcaagatggggctcatcgggtctcca
gagcgccagagcaaagcccgggcttctccgtacagcttccaattcttgtggaagtccctc
ggagaactggaacactacgatttagagttagatgaaattttggacgttccatatgcaaat
taccagtcagctgccatggacacaggcgaggagcgaaagcccgagcctcagtgcaagctt
gacagggcacagagctcgggtctttgtttgtctgccacagaagctcaatgggacccagtg
aacggcaaaactgtgacgagccagagccacacggccccacagaccaaagcggacgtgcac
acaagctcagacgaaaacggcaaaggcaaggacagacagggatgcacacaaccgcacgag
atcgacgtacatgagcaagacctcttagaagcaacgacgacaggtctcacggttggctct
ccatcaggtggggcattcaagtgtcccgaagcagaagtaatcagccaaactctacccagg
gttctgaattccatctcggagtgtgcggagggcgaggaggagagaggggcggcttgtcag
agtgttgcgaaggatcatgccgctcgtggtgcgatgggaatagaagttctgatgccccag
ccagaagagatgaccaaggcaaggagcatcatcactgctattgcggagggccatgtttcc
ctattgcgcaagcagctgtcggagagtgcggagaggatccgtgacgagggggcaaacaac
gtcctgcacatggcagccgccagcgggcagctcgagtgcctgcagtacctggcctctgcc
ctccccgaggacgggcttttggagcggaatgcagagggcctcacacccacggccaccgcc
atcaagaatggtcatctggagagcgtcatgtggctggtgtcggagaccgaggcgggcgcc
gaactgagcgtctccgtggagaggcccgcgctgatacacttcgcggcacgctttggacag
gagcggatcctcgtgtggctgctgcagtacatgcaggaggagggagtgtccctggacggc
ctggacccggacggaaacagcgcggcgcacgtggccgctcgcgagggccacctggcctgc
ttgcagaccttggtggagtacggagcgagcgtgacgacgctcaacaaagtcgggcagaag
ccgctgcagtgtgcagagaagcacaggcacccgacgtgtgctcgctacctggtggtggtg
gagacttgcatgtcactggcgtcccaggtggtcaagcttaccaagcagctccgagagaaa
acgtctgaaattgtgaagctgcagagccaactgcaggtccttacgggtgggcaggcatcg
gccagcattccagacaaggtccacccggcacggtggtctggatcgtcgcctgattacagc
aggagttcgggaagctctccagaatctacgcagctcagcagcgttggccgaagcgcatca
caagaacttgtaaatgcaaaacccattggcagtcagacgggcgggcacggcagccatcta
ccccccaaagcaggccagggattgtttcagggggcagaggacaccgatacggtgctcaga
aacctcctgggtgaggagatctctggacagatgctaaaggatgagaagctgtcactcgag
tttccggataaagacaaaaaaagattcatccaaaggcagctgcacaacagaaaggcagct
ggccctggcgctggcaggccgggctacgttggcggcagcccctccgacgggagaccttcg
agcagctccagcacagactccagctcgccagtcaaccaacagaggcccaggccgcggccc
atcgtggagaaaggcgagaacctgcactttgtgctcaaaaagcacgccttcgatggcggc
agggcccagagctcctcgtcgccagacagcgcgggccagggaagtgaccctggcgcttgg
tccgcccccaagatgtcgcgctctgtctcgctggacagcggcacggcgcagacggagggc
ggctcgtcgtcgagcgcctccacgcccgagttgcgctcgcccaagtcggagcgacgctgc
agccccaagagcgccctcaagtcgccgacgtctcggggcaagagcctgtcgggcaccaag
ctgcgtgtgacattcgaggagcccctggtgcacgtggcgccgccaccggagcccacgcag
ccgtccgccgagccgtctgcggacggtggctcgggcccacgggccggcggctcgccgtca
cggccggctaataacatctactctgtcagtgcatgccgcatgctggatcagagtaaatgc
tcaggcacacaaagttgtgaaagcgctcacgaggaggtcaaccggatgaaagctgggacg
gacaaaggtcctgctgaagcccaagaattcttcttgtga
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