Petromyzon marinus (sea lamprey): 116955166
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Entry
116955166 CDS
T09614
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116955166 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116955166 (NUP85)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116955166 (NUP85)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116955166 (NUP85)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116955166 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
116955166
NCBI-ProteinID:
XP_032832067
UniProt:
A0AAJ7UC35
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All DBs
Position
58:400721..451160
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AA seq
662 aa
AA seq
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MARGRLQVTSPKLHSERERDGGVMEERDESVQETLVNGLGSGQALLGLDWHLGGLLLYNT
KYTRNGGSVTGGGDSDAMLVECERDASMSCPVMRTLYSELYSIFSSLQQQQGAGPVDKKQ
LVEFSRSYRSVMRATMEGLQKMGMSTEDDIKLDYCKEQVQALLDLELIWNLCEVLFVEAA
QAGLLVPLLLDWVHLHGSHVETQAQLVLSSSNPGQHPQYWDTVLGFVLQGRIGEARQLLS
HTASSVPPGSRSLVKHMDTLLKRMPFYTASQSLAEFDLRWRHWQEECQSVLREGAFASHQ
HLELLCKILAGEEEALMESRGLMRWYGYMVARLLYSHPTAKPSELQHYVQAACCVYGNDA
ASSPLDQLLQVVFDMNLHQLLKDCSLALNNWWFVAHLSDLLHHCQQLQSGTSLREFLLLE
FATNLMAHHSLWSLAPVYLDACGEEGRAVMKLWLVRLPLQSERKAQKVLRICQERNLQEQ
ARGICKEMAVRAVRSGRLGLALNWSLRAKDPALTTALADRFLDSYAARGAFCDLELIDSL
GSSILLSDRLTFLGKYREFHRLYGDRRLPEAARLLLTLMTARVAPTGFWLTLLGDAVPLL
THQQVIFDAEQSSQLLDCLEEAVERSSVGKWAGTDQEQEEYEEKKDLIRMAIVQNLARAI
VG
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggggccgtctgcaagtgacgtcaccaaagctgcattcggagagggagagagac
ggcggcgtcatggaggagagggatgaaagtgttcaggagacgctggtgaatggcctgggc
tcagggcaggccttgctgggcctcgactggcatcttgggggattgctcctctataacaca
aagtacacgcgtaacggaggcagtgtgacgggagggggagacagcgacgcgatgctcgtg
gagtgtgagcgtgacgccagtatgagctgccccgtgatgcgcaccctctacagcgaactg
tacagcatcttttcctccctacaacagcagcagggtgccggccctgtcgacaagaaacag
ttggtggaatttagccgcagctaccgttcagtgatgagagcaaccatggaaggcttacag
aagatgggaatgtcaactgaggacgatattaagttggactattgcaaagaacaggtgcaa
gcactgctggacttggagctgatctggaatctgtgcgaggttctttttgtcgaagcagct
caagctggcctcctggtgcccctgctgctggactgggtgcatctacacggaagtcacgtg
gagacgcaggcgcagctcgtgctgagcagcagcaacccaggacagcaccctcagtattgg
gacacggtgctgggctttgtgcttcagggccgcataggagaggcgcgacaactgctatcc
cacacagcctcctccgtgccccccggctctcggagtctggttaagcacatggacacgttg
ctcaaacggatgcccttctatacggcctcgcagtccctggccgagttcgacttgaggtgg
agacactggcaggaggaatgccagagtgtgctgcgggagggagcctttgcctctcaccag
cacctggagctcctgtgtaagatcctggccggggaggaggaggcgctgatggagagcagg
ggcctcatgcggtggtacggctacatggtggctcgcctgctctacagccaccccacggcc
aagccctccgagctgcagcactacgtacaggcggcctgctgtgtgtatgggaacgacgcg
gcctcctccccgctcgaccagctcctgcaggtcgtgttcgacatgaacctacaccagctg
ctcaaggactgcagcttggcgcttaacaactggtggttcgtggcgcatctcagtgacctg
ctgcatcactgtcagcaactccagtcgggcaccagtctgcgtgagttcctcctcctggaa
ttcgccacgaacctcatggcgcatcacagcctgtggagcctggcgccggtgtacctggac
gcgtgcggtgaggagggccgcgctgtcatgaagctgtggctcgtgcggctgcccctgcag
agcgagcgcaaggctcagaaggtgctcaggatctgccaggagaggaacttgcaggagcag
gctcgcgggatctgcaaggagatggcggtgagggcagtgcgctcggggagactcggactc
gcactcaactggagcctccgtgcgaaagatcccgcactcaccacggcactggccgaccgg
ttcctggacagttacgccgcccgtggagctttctgcgacttggagctcatagacagcctg
ggttcctctatacttctgagcgaccgtcttaccttcctgggtaagtaccgtgagttccac
cggctctatggagaccggaggctccccgaggctgcgcgcttgctgctcacgctgatgacc
gctcgagtggcccccaccggcttctggctcacactgctgggcgacgctgtgcccctgctc
actcaccagcaggtgatttttgatgctgagcagagctcgcagctgctagactgtttggag
gaggccgtggagaggagctctgtgggaaaatgggcaggaacagatcaggagcaggaggag
tacgaggagaagaaggatctcatccgcatggcgatcgtgcagaacctggcacgtgccatt
gttggctag
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