KEGG   Petromyzon marinus (sea lamprey): 116955212
Entry
116955212         CDS       T09614                                 
Symbol
POLR2F
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03020  RNA polymerase
pmrn03420  Nucleotide excision repair
pmrn04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116955212 (POLR2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116955212 (POLR2F)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    116955212 (POLR2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmrn03021]
    116955212 (POLR2F)
   03400 DNA repair and recombination proteins [BR:pmrn03400]
    116955212 (POLR2F)
Transcription machinery [BR:pmrn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     116955212 (POLR2F)
  RNA polymerase III system
   RNA polymerase III
     116955212 (POLR2F)
  RNA polymerase I system
   RNA polymerase I
     116955212 (POLR2F)
DNA repair and recombination proteins [BR:pmrn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116955212 (POLR2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6 eIF3_subunit
Other DBs
NCBI-GeneID: 116955212
NCBI-ProteinID: XP_032832117
UniProt: A0AAJ7XFC5
LinkDB
Position
58:complement(1920770..1928495)
AA seq 125 aa
MSDNEDNFDGDDFAEDEEAMDDLDNAEEEGEERVEVLAAGDGTPGAAKRITTPYMTKYER
ARVLGTRALQIAMCAPVMVELEGETDPLQIAIKELKARKIPIIIRRYLPDGSYEDWGVDE
LIVTD
NT seq 378 nt   +upstreamnt  +downstreamnt
atgtcggacaacgaagacaatttcgatggagatgattttgctgaagatgaggaggcgatg
gacgacctcgacaatgccgaggaggagggcgaggagagagtggaggtgctcgctgcggga
gatgggacccccggtgcggcgaagagaatcaccactccgtacatgacaaagtacgagagg
gcgagagtcctgggcactcgcgccctgcagatcgccatgtgtgccccagtcatggtggag
ttggaaggagaaaccgatccactgcagatcgctatcaaggaactcaaggctcggaaaata
cccatcatcatcaggaggtatctgccagacgggagctacgaagactggggagtggatgaa
ctcatagtcacggactga

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