Petromyzon marinus (sea lamprey): 116955326
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Entry
116955326 CDS
T09614
Name
(RefSeq) collagen alpha-2(I) chain-like
Organism
pmrn
Petromyzon marinus (sea lamprey)
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
116955326
NCBI-ProteinID:
XP_032832237
EnsemblRapid:
ENSPMAG00000018495
LinkDB
All DBs
Position
59:368957..465128
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AA seq
1529 aa
AA seq
DB search
MTGAAVTTESSERMTTGSGGGGGRGVGGGGVGGGGGVGGGGGVGGGGGAVAVAVTPVQRR
AGPQGGTDPTVATRVDTGGQVTKEEAEERNPHLHFVRIEWGKEIFLIPGLPGPRGDPGFQ
GPRGFPGIKGEKGDTGSLGRAGVGGNPGPPGPPGLPSIIVVHREPGDDWSSIKQSKFYKT
LIDNWPRHQGPTGPMGRTGDPGPRGPPGIPGNDGEKGERGRPGESGLPGLTGPAGRPAPD
GIQGDDGEQGPLGPPGEPGPQGDKGERGPPGEKGDQGYRGDVGDIGPKGERGPKGEKGDP
GLPGALGAMGPPGVKGVAGPAGATGLPGDYGFVGLQGPSGVEGMMGHPGPAGDPGVNGSQ
GDRGSPGPQGPKGPQGPLGIMGEMGPRGATGKQGRGGSDGPPGLKADEGPPGVMGERGED
GAEGYKGVSGLSGATGPRGDKGLKERSGHRGDVGEKGDRGVPGWRGPKGFSGFRGPAGHQ
GFPGSKGRSGPVGSTGLEGPMGVQGKKGKLGPKGDQGVIGSKGISGSRGVRGRTGQRGLV
GFPGAPGEKGTGGREGAEGKPGTQVPMHPSCCHAALTRQTPHSHRVYTHTADTTLTPCTH
SHGRHHTHTVYTLTPCGAPGVTGNAGRRGFRGFRGLPGLRGVDGPLGPTGPRGLPGTAGN
AGNPGEKGLPGKPGLPGIQGPVGTYGSPGSSGEGGVTGSPGPKGEVGKQGAPGKSGQPGL
KGPRGNPGNSGKPGPQGKQGQPGAKGFQGQPGLSAKPGVDGETGKPGPPGSLGPTGPRGP
SGPLGLQGEQGDPGLDGQPGDKGDVGGRGPPGDPGVAGLDGEQGLPGGDGVKGETGSKGP
LGDKGERGSRGPPAPKGDGGEQGRVGPQGTSGAPGREGASGPGGQPGPQGPRGEKGPPGQ
IGPPGSVGHMGTMGSPGETGPKGEKGNRGLLGQPGLQGSSGASGPLGLPGPLGERGSEGK
EGNTGDKGDVGPDGTSGPTGAAGLSGTRGVRGDNGEPGRGGARGSLGGLGAAGADGPKGD
VGPRGPKGDAGAKGKPGPPGVEGPAGPPGPRGPPGIPGAEGSPGPQGQKGEAGRDGVPGP
RGPLGSDGWDGFKGDKGDTGIDGDPGTRGPHGIVGEEGKPGIEGNRGEPGVKGKPGAQGP
RGIPGPVGPPGIPGLRGEKGKSGSKGEKGETGEKGEPGEPGEAGIKGLTGTLGKKGTLGP
KGIQGLRGVSGPPGLLGPPGMPGLFGMKGEKGIKGESGRKGSPGPPGRPGPPGPPGPSAV
ATGAALVRMLSAGSVASGLESTTTRGPPSPRTAGPPNTRAVANDADSALAPLLARLRALG
SRAELALGELQGTRQRPATTCRDLGLCRPGLNDGFYYIDPNQGCPHDALRAFCNFTAGGA
TCISPVTASLKVLPVTPDAGAGNGSDTWLHGTALQEQAVYEGLHTVQLKFLRLHSTGARQ
AATVPCARTAAESSAWRVSLLSDSGLALTHGHPDVSLPHAPCQGQGEEFQVEVRTDNLEL
LPLRDAAVTAPDGGRRDERPATLGPVCFL
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgaccggggcggccgtcaccaccgagtcgagcgagcggatgacgaccggcagtggaggc
ggtggtggccgtggcgttggtggcggtggcgttggtggcggcggtggcgttggtggtggc
ggtggcgttggtggcggcggtggcgcagttgcggtggcggtgacaccggtgcaacgccgc
gccgggcctcagggagggaccgatccgacggtggccaccagggtggacacagggggccag
gtcacgaaggaggaggcggaggagaggaacccccacctgcactttgtccgaatcgagtgg
ggcaaggagatcttcctcatccctggactccccggtccccgcggcgacccgggctttcag
ggaccccgaggatttcctggaataaaaggtgaaaagggggacactgggtctctaggccgg
gctggtgttggggggaatcctggccctcctgggccccccggccttccgtccatcatcgtt
gtccaccgggagccgggtgacgactggagttccatcaagcaaagcaagttttacaagacg
ctcattgacaattggccgagacatcagggccctacgggccccatggggaggacaggggac
ccaggccccaggggaccgccaggaattccgggaaacgacggagagaaaggggagcgaggc
aggccgggggagtcgggcctaccaggcctcaccgggcctgcaggccggcccgcgcccgac
ggtatccaaggcgacgatggcgagcaaggacccctgggcccgcccggagagcccggaccg
cagggagacaaaggagagagagggccacccggagagaagggagaccagggttaccgtggt
gatgttggtgatatcggcccaaagggcgaacgaggacccaagggagagaagggcgacccc
gggctgccgggagctctgggagccatgggccctcccggcgtcaaaggagtcgctgggccg
gccggtgccacagggctccccggggattacggattcgtgggtttgcagggtccctccgga
gttgagggcatgatggggcaccccggtccagccggggaccccggggtcaacggctcccag
ggagacaggggcagccctgggcctcaaggacccaaaggaccccagggtccgctaggaatt
atgggagaaatggggccacgtggggcaacagggaaacagggcaggggcggcagcgatggc
ccgcctggtctcaaagcggacgagggcccgcccggggtcatgggagagcgaggcgaggat
ggcgctgagggctacaagggcgtgtccggcttgtccggcgccaccgggccgcgtggcgac
aagggcctcaaggaaaggagcggacaccgtggtgacgtgggagagaaaggcgatcggggt
gtccctggctggaggggccccaagggattctccggcttccggggtccggccggccaccag
ggattcccggggtccaaggggaggtcgggcccagtgggctccacggggctggagggaccc
atgggtgtgcagggaaaaaaggggaaattgggccccaagggcgaccagggcgtgattggc
tcaaagggcatctcaggatctcgaggcgtccgtggacggaccggccaacgtggcctcgtc
ggcttcccgggggctccgggcgagaagggcacgggcgggagggagggagcggaaggaaaa
ccgggtacccaggttcccatgcacccatcctgctgccacgcggcactcacacggcagaca
ccgcactcacaccgtgtgtacactcacacggcagacaccacactcacaccgtgtacacac
tcacatggcagacaccacactcacaccgtgtatacactcacaccatgtggagcgcccgga
gtgacggggaacgcggggaggagggggttcaggggcttcagaggcctaccgggactcagg
ggggtggatggtcccctggggccaacgggacctcgcggtttaccgggaaccgccggcaac
gcgggcaacccgggggagaagggcctcccaggaaagccaggactgcccggcatacaaggc
cccgtcggcacctatggatctccaggcagcagtggagagggaggcgtcactggttcccca
gggccaaagggcgaggtggggaagcagggagctccggggaaatcgggacaacctggactt
aagggaccccgagggaaccctggaaactccgggaagccaggtccccaggggaagcaaggg
cagcctggagccaagggctttcaagggcagccggggctctctgcaaaacccggagtggat
ggtgagacggggaaaccaggcccgcccgggagcctcggccccacaggcccgagaggccct
tccgggccgctgggcctacagggtgaacaaggtgaccccggtctggacggccaacctgga
gacaagggagatgtgggaggacggggcccccccggggatccaggagtggccgggctcgac
ggggagcagggccttcccggtggagatggggtgaaaggagagacgggatctaaaggacct
ctgggagacaagggggagcgcgggagccggggcccgccggctcccaaaggggacggcgga
gagcaggggagggtgggcccacaggggacgtcgggagccccagggagagagggcgcgagc
ggaccgggaggccaacctggaccccagggtccacgtggagagaagggtccgcccgggcag
attggccctccgggctctgttggccacatgggaacgatgggaagcccgggggagactggt
cccaagggcgagaaaggcaaccggggattgctgggtcagcctggactgcaggggtcaagc
ggagcaagcggacccctggggctccccggcccccttggtgagcgaggctcggaggggaag
gagggaaacacgggagacaagggcgacgtggggccagacggaacctcgggaccgactgga
gccgccggactctcgggcacacgtggcgtgcgtggagacaacggcgagcctgggagagga
ggagcccgcggatcgctcggagggctaggggccgccggagcggatggccccaagggggat
gtgggccctcggggacccaagggggacgcgggagccaaggggaagccagggcccccgggg
gttgaaggccctgctggtccgcctggcccacggggacctcctggcatcccaggagctgag
ggctcaccaggaccccaggggcagaagggggaggcggggagagacggcgtgccggggccc
cgtggcccgctgggtagcgacgggtgggacggattcaagggagacaagggggacacgggg
atcgacggagacccgggcacgcggggcccacacggcatcgtgggagaagagggcaagccg
ggcatcgaagggaaccgcggagagcccggtgtgaaggggaaacctggagcccaaggccct
cgtgggattccaggccctgtgggtcccccgggcatcccgggtctgaggggagagaagggg
aaatcgggaagcaaaggagagaagggcgaaaccggagagaaaggagagcctggggaaccg
ggagaagcgggaatcaagggtctcacggggacactggggaagaaggggacgctgggaccc
aaaggcatccagggtctgaggggcgtctctggaccccctggacttttgggacccccagga
atgccgggactgtttggaatgaagggagaaaagggaatcaagggagagagcggacgcaag
ggatcgcccggccccccgggccggcctgggcctcccggcccaccgggccccagcgcggtc
gccaccggagcggccctcgtcaggatgctctctgcgggctccgtggcctcggggctcgag
tccacgacgacgcgggggcccccctctccccgcacggccgggccccccaacacgcgcgcc
gtcgccaacgacgcggactccgcgctggcgccgctgctggcgaggcttcgcgccctgggg
agccgggcggagctggcgctgggcgagctgcagggcacgcgccagcgccccgccaccacc
tgccgggacctcgggctctgccggcccgggctcaacgacgggttctactacattgacccc
aaccagggctgcccccacgatgccctgcgcgccttctgcaacttcaccgccggcggggcc
acctgcatctccccggtcaccgcctccctcaaggtgctgccggtgactccagatgcggga
gcgggaaacggttccgacacgtggctccatggcactgcgctacaggaacaggcggtctac
gagggtctgcacacggtgcagctgaagttcctgcggctgcacagcacgggggcgaggcag
gccgcgacggtgccgtgcgcgaggacggcggcggagtcgtcggcctggcgcgtctccctg
ctctccgacagcgggctggcgctcacgcacggccaccccgacgtgtcgctgccccacgcg
ccctgccagggccagggcgaggagttccaggtggaggtgcgcaccgacaacctcgagctg
ctgcccctccgggacgcggccgtgacggcgccggacggcggccggcgggacgagcgcccg
gccacgctggggcccgtgtgcttcctctga
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