Petromyzon marinus (sea lamprey): 116955381 Help Entry 116955381         CDS       T09614                                  Name (RefSeq) tenascin-like isoform X1   KO K06252   tenascin Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn04510   Focal adhesion pmrn04512   ECM-receptor interaction pmrn04518   Integrin signaling Brite KEGG Orthology (KO) [BR:pmrn00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116955381    04518 Integrin signaling     116955381  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     116955381  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pmrn00536]     116955381 Glycosaminoglycan binding proteins [BR:pmrn00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116955381 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  EGF_TEN EGF_Teneurin EGF_Tenascin fn3 EGF_2 Fibrinogen_C hEGF EGF Pur_ac_phosph_N DUF7949 Fn3_Dep-1_3rd Fn3_Dep-1_2nd FN3_DSCAM-DSCAML_C Fn3_Dep-1_4th Motif Other DBs NCBI-GeneID:  116955381 NCBI-ProteinID:  XP_032832303 UniProt:  A0AAJ7U9F4 LinkDB All DBs Position 59:5220881..5324966 Genome browser AA seq 1796 aa AA seqDB search MHRPQVPVLALLALQLLLLGIDPGRARVLERSTHGPHRRLHRRAAAAAPAGRIGKALPPP RPPAGPLAASGGERQVSVQLPADSVAGSGPSPVVFNHVYNINVPLGSMCSVDLQAARGAA GAAAAASITPGHSHVGDGEKSVVFTHRINIPPQACGCGGAGGGGALPNLQDLLSRLEAME NEVSSLRQLCSGASGGCCNGGQGNAASAGRTDYLPACGGHGSFSLETCGCICEPGWSGKN CTEPTCVPPCVHGRCLDGACLCDEGYSGPDCRALKCPNDCNDYGRCVDGKCVCDDDYTGD DCSEQRCPNECSDRGNCVDGVCVCDEGFAGEDCSETRCPNDCQDRGRCVNGQCVCDEGFT GDDCGELTCPDDCKDRGRCVDGKCICDEGFTGEDCSELTCPNNCQHRGRCVNGKCICDEG FTGEDCSELTCPNNCQDRGRCVNGKCICDEGFTGEDCSELTCPNNCQDKGRCVNGKCICD EGFTGEDCSELTCPNNCQDRGRCINGKCICDEGFTGEDCSELTCPNNCQHRGRCVNGKCI CDEGFTGEDCSELTCPNNCQDRGRCVNGKCICDEGFTGEDCSELRCPNDCQDQGRCVDGK CVCDEGFTGEDCSELRCPNDCSDRGRCVDGKCVCDEGFTGEDCSELRCPNDCNDRGRCVD GKCVCDEGFTGEDCSDLRCPNDCQDQGRCVNGKCVCDEGFTGEDCSELRCPNDCSDRGRC VDGKCVCDEGFTGEDCSELRCPNDCQDQGRCVDGKCVCDEGFTGEDCSELRCPNDCQDQG RCVDGKCVCDEGFTGEDCSELRCPNDCNDKGRCVDGKCVCDEGFTGEDCTEVTSPKDLQV VDVTDRTIDLEWGVEGEMVVTQYLVEYAPTASGGVQMEQRVPGDRRATTLEQLEPGVEYF IRVYAVLSGQRSVPISARVATHLSTPEGLRFKSVRESSVEVQWDPFNFTIDGWELIFTEK LDEDDAPVGLPAAPVTTRLGASETSHVQSGLRPGHGYHVSLVATKDDARSPPANADVNTL LDAPSGLQARDVDDSSAQLTWRAPLARVDELILAHGRPGETPQERRVPAGATGHALRGLA PGQRYAVSLVGVRGELRSDADTVEFTTGVDPPRGLQVVGAQERSLELSWEHSRAAADSYR VRYSSLDGAHSAETTVPRGTGARGAAKLTGLRPGLEYGIGVSAVKALQESRPATTNGKTR MDAPKNPRVTDATESSLTLAWEAPEAKAERYVVSYRAVGGAAGGPGGDGAAGRSGELTVP GAQTHAELSGLQAGTEYRLSVRALAGAARSEEATTTGETVLDPPRGLGFQDVTETTVVVT WLAPTGRPDAFKITYVPVDGGEQEVVSVPGGVSAETLVSLIPGTEYEVSVTTVQGVRESE PISGTVTTELDAPHSLAAVDVTDSTALLRWQATLGPVDSYIIVFAPQDGEDVMNELAGSL HEFGLSDLRPITLYTVRLRAVKGAQQSRDAHTSFTTGLDPPRDLTATEIDTQGALLTWTP PVGAVTGYVLSYQGPDGVEQTVEVEGGASTARISALLTKTRYAVRLYAVRGTVRSLTVET DFTTAGRRHANPRDCAEALLDGQRASGVTTVYLAGDPARPLQVYCDMETDGGGWIVLQRR QNGKTNFMRGWKEYEKGFGELTDEFWFGLRDVHALTSQGRYELRVDLRSGSEAVFATYDS FSVGEPGGLYKIRVGQYAGTAGDSMTYHQGRPFSTHDRDNDIAITNCAVSYKGAWWYKNC HRANLNGRYGDNSHSQGVNWYHWKGHEHSVDFAEMKVRPHDFKLSLNRVQRSGGAQ NT seq 5391 nt NT seq  +upstreamnt  +downstreamnt atgcaccgcccacaggtgcccgtgctggccttgctggcgctacagctgctgctgctgggc atagatcctggccgtgcgagggtcctcgaacgctccacccacggtccccaccgccgactc caccggagggccgcggcggccgcgcccgcaggtcgcatcggcaaggccctgccgccgccc cgaccccccgcaggccctctggcggcctcaggcggcgagcggcaggtgtcggtgcagctg cccgcggacagcgtcgccggctccgggccgtcgcccgtcgtcttcaaccacgtctacaac atcaacgtgccgctcggctccatgtgcagcgtggacctgcaggcggcgcggggagcggcc ggggctgcggccgctgcttctatcactccaggccactctcacgtgggagacggcgagaag agcgtggtcttcacgcaccgcatcaacatccctccgcaggcgtgcgggtgtggaggggcg ggtggtggtggggccctgcccaacctccaggacctgctcagtcggctggaggccatggag aacgaggtgtcgtctctccgccagctctgctccggagcctccgggggctgctgcaacggg ggccaggggaacgcggcgagtgctggccgcaccgactacctgcccgcgtgcggaggccac ggctccttcagcctggagacgtgcggctgcatctgcgagccgggctggagcggcaagaac tgcacagagccgacgtgcgtgccgccgtgcgtgcacggccgctgcctcgacggcgcgtgc ctgtgcgacgagggctactcggggcccgactgccgcgcgctcaagtgccccaacgactgc aacgactacggccgctgcgtcgacggcaagtgcgtgtgcgacgacgactacacgggcgac gactgcagcgagcagcgctgcccgaacgagtgcagcgaccggggcaactgcgtggacggg gtgtgcgtgtgcgacgagggcttcgctggtgaggactgcagtgagacccggtgtccgaat gactgtcaggaccgtggccgctgtgtcaatggccagtgcgtgtgcgacgaaggcttcacc ggcgacgactgcggtgaactgacctgcccggacgattgcaaggacagaggaagatgcgtt gatgggaaatgcatctgcgacgaaggcttcactggggaagattgtagtgaattgacctgt cccaacaactgtcaacacagaggaagatgcgtcaatgggaaatgcatctgcgatgaaggc ttcactggggaagattgtagtgaattgacctgtcccaataactgtcaagacagaggaaga tgcgtcaatgggaaatgcatttgcgatgaaggcttcactggggaagattgtagtgaattg acctgtcccaacaactgtcaagacaaaggaagatgcgtcaatgggaaatgcatttgcgat gaaggcttcactggggaagattgtagtgaattgacctgtcccaacaactgtcaagacaga ggaagatgcatcaatgggaaatgcatctgcgacgaaggcttcactggggaagattgtagt gaattgacctgtcccaacaactgtcaacacagaggaagatgcgtcaatgggaaatgcatc tgcgacgaaggcttcactggggaagattgtagtgaattgacctgtcccaacaactgtcaa gacagaggaagatgcgtcaatgggaaatgcatctgcgatgaaggcttcactggggaggat tgtagtgaacttagatgtcccaacgattgtcaagaccaaggaagatgcgtcgacgggaaa tgcgtctgcgatgaaggcttcactggagaagattgtagcgaacttagatgtcccaacgac tgcagtgacagaggaagatgcgtcgacgggaaatgcgtttgcgatgaaggcttcactgga gaagattgtagcgaacttagatgtcccaacgattgtaatgacagaggaagatgcgtcgac gggaaatgcgtttgcgatgaaggcttcactggagaagattgtagcgatcttagatgtccc aacgattgtcaagaccaaggaagatgcgtcaatgggaaatgcgtctgcgatgaaggcttc actggagaagattgtagcgaacttagatgtcccaacgactgcagtgacagaggaagatgc gtcgacgggaaatgcgtttgcgatgaaggcttcactggagaagattgtagtgaacttaga tgtcccaacgattgtcaagaccaaggaagatgcgtcgacgggaaatgcgtctgcgatgaa ggcttcactggggaggattgtagtgaacttagatgtcccaacgattgtcaagaccaagga agatgcgtcgacgggaaatgcgtctgcgatgaaggcttcactggggaagattgtagcgaa cttagatgtcccaacgactgtaatgacaaaggaagatgcgtcgacgggaaatgcgtctgc gatgaaggcttcactggggaagactgcacagaagtgacctctcccaaggacctgcaggtg gtggacgtgacggaccgtaccatcgacctggagtggggggtggagggcgagatggtggtc actcaatatctggtggagtacgcgccgacggcgtcgggcggcgtgcagatggagcagcgc gtgccgggagaccgccgtgccaccaccctggagcagctggaacccggcgtggagtacttc atccgcgtctacgccgtgctcagcgggcagcgcagcgtgcccatcagcgcccgcgtggcc acgcacctctccacgcccgaggggctgcgcttcaagtcggtgcgcgagtcctcggtcgag gtgcagtgggatcccttcaacttcaccatcgacggctgggagctgatcttcaccgagaag ctcgacgaggatgacgcgcccgtggggctgcccgcggcccccgtgaccacgcggctgggc gcctccgagacgtcccacgtgcagagcggcctgcggcccggccacggctaccacgtgagc ctcgtggccaccaaggatgacgcccgcagcccgccggccaacgccgacgtcaacacgctc ctggacgcgccgagcggcctgcaggctcgtgacgtggacgactcttcggcccagctcacg tggagggccccgctggcccgcgtggacgagctcatcctggcccacggccgccccggcgag acgccccaggagcggcgcgtgcccgccggggccacgggccacgcgctgcggggcctcgcg ccgggccagcgctacgccgtgagcctcgtgggcgtgcgcggcgagctacggagcgacgcc gacaccgtggagttcaccacgggtgtggaccccccgcggggtctgcaggtggtgggggct caggagcgctcgctggagctgtcgtgggagcacagccgcgccgctgccgactcgtaccgc gtgcgctactcctcgctggacggcgcccacagcgccgagaccacggtgccacgtgggacc ggggctcgcggcgccgccaaactcaccggcctgcgacccggactggagtacgggattggg gtgtcggccgtgaaggcgctacaggagagtcgcccggccaccaccaacggcaaaacgcgc atggacgcgcccaagaacccccgcgtgacggacgccacggagtcgagcctgactctcgcc tgggaggccccggaggccaaggcggagcgctacgtcgtgtcgtaccgcgccgtcggcggg gcggccggcgggcctggcggggacggcgccgcgggccgctccggggagctcacggtgccg ggcgcgcagacgcacgccgagctgagcggcctgcaggccggcaccgagtaccgcctctcg gtgagggcgctcgcgggggcggcgcgcagcgaggaggccaccaccacgggggagaccgtg ctggaccccccacggggcctgggcttccaggacgtgacggagaccacggtggtggtcacg tggctcgctcccacggggaggcccgacgccttcaagatcacctacgtgcccgtcgacgga ggtgagcaggaggtggtgagcgtgccgggcggggtgagcgccgagacgctcgtgtccctc atccccggcaccgagtacgaagtgagcgtcaccacggtgcagggggtgcgcgagagcgag cccatctccggcaccgtcaccaccgagcttgacgctccgcacagcctggcggccgtggac gtcaccgactcgacggcgctgctgcgctggcaggccacgctggggcccgtcgacagctac atcatcgtcttcgctccccaggacggcgaggacgtgatgaacgagctggccggctcgctg cacgagttcgggctctctgacctgcgccccatcacgctctacacggtgcgcctgcgcgcc gtcaagggcgcccagcagagtcgcgacgcgcacacctccttcaccacgggcctggacccc cctcgggacctgacggccacggagatcgacacccagggcgcactcctcacgtggaccccg ccagtcggcgccgtcacgggatacgtcctctcctaccagggtcccgacggggtcgagcag acggtggaggtggagggaggggcgtcgactgcgcgcatctccgcgctgctgacgaagacg cgctacgcggtgcgcctgtacgcggtgcgtgggacggtgcgcagcctcaccgtggagacc gacttcaccaccgccggacgtcgccacgccaacccgcgcgactgtgccgaggcgctgctc gacggccagcgtgccagcggcgtgaccaccgtctacctggccggggaccccgcacggccg ctgcaggtctactgtgacatggagaccgacggcggcggatggatcgtgctgcagaggaga cagaacggcaagaccaacttcatgcgtgggtggaaggagtacgagaagggattcggggaa ctcacggacgagttctggttcgggctgcgtgacgtgcacgcgctgacgtcccagggccgc tacgagctacgcgtggacctgcgcagcggctctgaggccgtcttcgccacctacgacagc ttctccgtgggcgagccgggaggcctctacaagatccgcgtgggacagtacgccggcaca gccggcgactccatgacgtaccaccagggccgccccttctcgacgcacgaccgtgacaac gacatcgccatcaccaactgcgccgtctcctacaagggcgcctggtggtacaagaattgc caccgcgccaacctcaacgggcgctacggtgacaacagtcacagccagggtgtgaactgg taccactggaagggccacgagcactcggtggactttgcggagatgaaggttcggcctcac gacttcaaactctcgctcaatcgagtgcagcgctcggggggggctcagtga

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